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ngsPool.jl crashes when reference allele is coded as "N" #5

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BaronKoy opened this issue Oct 3, 2024 · 0 comments

BaronKoy commented Oct 3, 2024

Using ngsPool to calculate the allele frequencies in a gzipped pileup file crashes when encountering the reference allele as "N":

Entries on line 47643 of pileup file:

Frequencies are calculated up until this line.

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