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atlas init-publicdoesn't work. #535

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SilasK opened this issue Jul 25, 2022 · 2 comments
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atlas init-publicdoesn't work. #535

SilasK opened this issue Jul 25, 2022 · 2 comments

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@SilasK
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SilasK commented Jul 25, 2022

Unfortunately I based this part on scripts that interact NCBI Trace, which was discontinued in June 2022.

Apparently it is very complicated to get the right data from NCBI.

I try to find another solution based on EBI using pysradb of ffq.

@SilasK SilasK pinned this issue Aug 2, 2022
@luozhy88
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I have same problem!

@github-actions
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There was no activity since some time. I hope your issue is solved in the mean time.
This issue will automatically close soon if no further activity occurs.

Thank you for your contributions.

@github-actions github-actions bot added the stale label May 18, 2023
@github-actions github-actions bot added the stale label Jul 22, 2023
@SilasK SilasK removed the stale label Jul 24, 2023
@metagenome-atlas metagenome-atlas deleted a comment from github-actions bot Jul 24, 2023
@SilasK SilasK closed this as completed Jul 28, 2023
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