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DESCRIPTION
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Package: motifr
Title: Motif Analysis in Multi-Level Networks
Version: 1.0.0
Date: 2020-12-01
Authors@R:
c(person(given = "Mario",
family = "Angst",
role = c("aut", "cre"),
email = "[email protected]",
comment = c(ORCID = "0000-0002-8297-9827")),
person(given = "Tim",
family = "Seppelt",
role = "aut",
email = "[email protected]",
comment = c(ORCID = "0000-0002-6447-0568")))
Description: Tools for motif analysis in multi-level networks.
Multi-level networks combine multiple networks in one, e.g.
social-ecological networks. Motifs are small configurations of nodes
and edges (subgraphs) occurring in networks. 'motifr' can visualize
multi-level networks, count multi-level network motifs and compare
motif occurrences to baseline models. It also identifies contributions
of existing or potential edges to motifs to find critical or missing
edges. The package is in many parts an R wrapper for the excellent
'SESMotifAnalyser' 'Python' package written by Tim Seppelt.
License: MIT + file LICENSE
URL: https://marioangst.github.io/motifr/
BugReports: https://github.com/marioangst/motifr/issues
Depends:
R (>= 3.5.0)
Imports:
dplyr,
ggplot2 (>= 2.1.0),
ggraph,
igraph,
intergraph,
network,
purrr,
RColorBrewer,
reshape2,
reticulate,
rlang,
scales,
tibble,
tidygraph,
shiny
Suggests:
ergm,
knitr,
pkgdown,
rmarkdown,
testthat (>= 2.1.0)
VignetteBuilder:
knitr
Config/reticulate:
list(
packages = list(
list(package = "sma", pip = TRUE),
list(package = "networkx", pip = TRUE)
)
)
Encoding: UTF-8
Language: en-GB
LazyData: true
RoxygenNote: 7.1.1
SystemRequirements: Python (>= 3.0.0), numpy, pandas