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New genome assembly for Arachis duranensis strain K30065 #212

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StevenCannon-USDA opened this issue Sep 4, 2024 · 0 comments
Open
2 of 14 tasks

New genome assembly for Arachis duranensis strain K30065 #212

StevenCannon-USDA opened this issue Sep 4, 2024 · 0 comments
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@adf-ncgr @sdash-github

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@StevenCannon-USDA
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StevenCannon-USDA commented Sep 4, 2024 •
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Main steps for adding new genome and annotation collections

Genus/species/collection names:

  • Arachis/duranensis/genomes/K30065.gnm1.M24N

  • Add collection(s) to the Data Store, including commits to datastore-metadata

  • Validate the README(s)

  • Update about_this_collection.yml

  • Calculate AHRD functional annotations

  • Calculate gene family assignments (.gfa)

  • Add to pan-gene set

  • Load relevant mine

  • Add BLAST targets

  • Incorporate into GCV

  • Update the jekyll collections listing

  • Update browser configs

  • run BUSCO

  • Update DSCensor

  • Add LINKOUTS to datastore, refresh linkout service
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@adf-ncgr @StevenCannon-USDA @sdash-github