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New genome and annotations for Trifolium pratense #203

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9 of 14 tasks
StevenCannon-USDA opened this issue Apr 22, 2024 · 0 comments
Open
9 of 14 tasks

New genome and annotations for Trifolium pratense #203

StevenCannon-USDA opened this issue Apr 22, 2024 · 0 comments
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StevenCannon-USDA commented Apr 22, 2024 •
edited by adf-ncgr
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Main steps for adding new genome and annotation collections

Genus/species/collection names:

  • Trifolium/pratense/genomes/HEN17-A07.gnm1.Y8WV

  • Trifolium/pratense/annotations/HEN17-A07.gnm1.ann1.LHG2

  • Add collection(s) to the Data Store, including commits to datastore-metadata

  • Validate the README(s)

  • Update about_this_collection.yml

  • Calculate AHRD functional annotations

  • Calculate gene family assignments (.gfa)

  • Add to pan-gene set

  • Load relevant mine

  • Add BLAST targets

  • Incorporate into GCV

  • Update the jekyll collections listing

  • Update browser configs

  • run BUSCO

  • Update DSCensor

  • Add LINKOUTS to datastore, refresh linkout service
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@adf-ncgr @StevenCannon-USDA