Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Add genome and annotations for Phanera championii #196

Open
2 of 14 tasks
StevenCannon-USDA opened this issue Feb 13, 2024 · 0 comments
Open
2 of 14 tasks

Add genome and annotations for Phanera championii #196

StevenCannon-USDA opened this issue Feb 13, 2024 · 0 comments

Comments

@StevenCannon-USDA
Copy link

Main steps for adding new genome and annotation collections

Genus/species/collection names:

  • Phanera/championii/genomes/longxuteng.gnm1.WJG7

  • Phanera/championii/annotations/longxuteng.gnm1.ann1.KGX9

  • Add collection(s) to the Data Store, including commits to datastore-metadata (at annex as of 2024-02-13)

  • Validate the README(s)

  • Update about_this_collection.yml

  • Calculate AHRD functional annotations

  • Calculate gene family assignments (.gfa)

  • Add to pan-gene set

  • Load relevant mine

  • Add BLAST targets

  • Incorporate into GCV

  • Update the jekyll collections listing

  • Update browser configs

  • run BUSCO

  • Update DSCensor

  • Add LINKOUTS to datastore, refresh linkout service
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@StevenCannon-USDA