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New genome+annotations for Cercis chinensis #191

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8 of 12 tasks
StevenCannon-USDA opened this issue Jan 17, 2024 · 0 comments
Open
8 of 12 tasks

New genome+annotations for Cercis chinensis #191

StevenCannon-USDA opened this issue Jan 17, 2024 · 0 comments
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@StevenCannon-USDA
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StevenCannon-USDA commented Jan 17, 2024 •
edited by adf-ncgr
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Main steps for adding new genome and annotation collections

Genus/species/collection names:

What are the collection types and names? Example:

  • Cercis/chinensis/genomes/GXIB.gnm1.5DZH

  • Cercis/chinensis/annotations/GXIB.gnm1.ann1.L8L4

  • Add collection(s) to the Data Store (annex)

  • Validate the README(s)

  • Update about_this_collection.yml

  • Calculate AHRD functional annotations

  • Calculate gene family assignments (.gfa)

  • Add to pan-gene set

  • Load relevant mine

  • Add BLAST targets

  • Incorporate into GCV

  • Update the jekyll collections listing

  • Update browser configs

  • run BUSCO
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