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grenedalf is a collection of commands for working with population genetic data.

Many commands in grenedalf are re-implementations of commands of the PoPoolation and PoPoolation2 tools. However, being written in C++, grenedalf is much faster and needs less memory for most of the tasks.

Command Line Interface

grenedalf is used via its command line interface, with commands for each task. The commands have the general structure:

grenedalf <command> <options>

Commands:

Command	Description
citation	Print references to be cited when using grenedalf.
frequency	Create a table with per-sample base counts and frequencies at each position in the genome.
license	Show the license of grenedalf.
version	Extended version information about grenedalf.