diff --git a/docs/walkthrough.md b/docs/walkthrough.md index 2a905e1..ca912f9 100644 --- a/docs/walkthrough.md +++ b/docs/walkthrough.md @@ -4,8 +4,7 @@ This document provides a guideline on how to use the polishing pipeline. ## Installation -Please make sure you have installed `MarginPolish` and `HELEN` using the [installation guide](installation.md). - +For this walkthrough we use docker containers. Please make sure you have docker installed. ## Download data Create a data directory and download the reads there.