Thursday, 2024/10/17
10:00 am ET
Terrell Russell, Kory Draughn, Marjolijn Mertz (NKI - Netherlands Cancer Institute), Mike Conway (NIEHS), Joost Willemse (Leiden University)
- NKI
- Using ManGO in production
- Now working on backup again
- Interested in ManGO image files 'import' into OMERO
- Interested in 'Save' from OMERO to iRODS
- Have 'archive' and 'working copy'
- Will monitor usage / demand from users
- Think about defining 80% workflows
- Willing to test soon
- Leiden is 'OMERO first' -> today... so 'save' is most similar to today's workflow
- Interested in 'datastore first', as more forever/future solution
- NL Bioimaging
- Nov 13, 2024, Leiden
- https://nvvm.microscopie.nl/13-november-nm-bioimaging-nvvm-yearly-meeting/
- BioImaging coming up
- Portugal in Feb
- https://bioimaging.scitevents.org/
- OMERO integration
- No movement on import/roundtrips
- Considering Java direct to iRODS
- Probably too much work
- Would drift / hard to keep synced/coordinated across projects
- C++ 'synthetic' Python iRODS resource plugin
- Can load python module to do the 24 required operations
- Initial investigation - seems reasonable
- Looking into funding opportunities / partners for development
- To be shared with image.sc community for implementation ideas
- (Virtual) Appliance / Recipe
- Still need more lab / core insights and use cases
- Define 'data products'
- Have to have a place to write it down 'forever'
- Or until policy says it can be deleted
- Next Meeting
- January 2025