diff --git a/.github/workflows/deploy.yaml b/.github/workflows/deploy.yaml index aec6e86..957ba3b 100755 --- a/.github/workflows/deploy.yaml +++ b/.github/workflows/deploy.yaml @@ -40,7 +40,7 @@ on: R version (also used as the tag to pull the origin image). required: true type: choice - default: "4.4.1" + default: "4.4.2" options: - "4.1.0" - "4.1.1" @@ -55,6 +55,7 @@ on: - "4.3.3" - "4.4.0" - "4.4.1" + - "4.4.2" - "latest" latest_r_version: description: | @@ -62,12 +63,12 @@ on: (Only relevant for rocker images). required: false type: string - default: "4.4.1" + default: "4.4.2" bioc_version: description: BioConductor Release required: true type: choice - default: "3.19" + default: "3.20" options: - "3.13" - "3.14" @@ -76,6 +77,7 @@ on: - "3.17" - "3.18" - "3.19" + - "3.20" - "devel" latest_bioc_version: description: | @@ -83,7 +85,7 @@ on: (Only relevant for rocker images). required: false type: string - default: "3.19" + default: "3.20" tag: description: | Custom Image Tag/Version. Defaults to current date in the `YYYY.MM.DD` format if unspecified. diff --git a/.github/workflows/scheduled.yaml b/.github/workflows/scheduled.yaml index a530dd0..fc4fc62 100644 --- a/.github/workflows/scheduled.yaml +++ b/.github/workflows/scheduled.yaml @@ -36,12 +36,12 @@ jobs: strategy: matrix: image: - - distro_tag: '4.4.1' - bioc: '3.19' + - distro_tag: '4.4.2' + bioc: '3.20' distro: rstudio-local origin: rocker - - distro_tag: '4.4.1' - bioc: '3.19' + - distro_tag: '4.4.2' + bioc: '3.20' distro: rstudio origin: rocker - distro_tag: 'latest' @@ -91,8 +91,8 @@ jobs: "distribution": "${{ matrix.image.distro }}", "r_version": "${{ matrix.image.distro_tag }}", "bioc_version": "${{ matrix.image.bioc }}", - "latest_r_version": "4.4.1", - "latest_bioc_version": "3.19", + "latest_r_version": "4.4.2", + "latest_bioc_version": "3.20", "tag": "", "tag_latest": "true", "release_tag": "${{ needs.create-release.outputs.release_tag }}" diff --git a/.github/workflows/security-scan.yaml b/.github/workflows/security-scan.yaml index e39d5b3..1a16cce 100644 --- a/.github/workflows/security-scan.yaml +++ b/.github/workflows/security-scan.yaml @@ -15,8 +15,8 @@ jobs: strategy: matrix: image: - - r: '4.4.1' - bioc: '3.19' + - r: '4.4.2' + bioc: '3.20' distro: rstudio steps: - name: Log in to the Container registry 🗝 diff --git a/Dockerfile b/Dockerfile index 62cc056..daa28fc 100644 --- a/Dockerfile +++ b/Dockerfile @@ -1,14 +1,14 @@ # Build arguments ARG ORIGIN=rocker ARG ORIGIN_DISTRIBUTION=rstudio -ARG R_VERSION=4.4.1 +ARG R_VERSION=4.4.2 # Fetch base image FROM ${ORIGIN}/${ORIGIN_DISTRIBUTION}:${R_VERSION} # Reset args in build context ARG DISTRIBUTION=rstudio-local -ARG BIOC_VERSION=3.19 +ARG BIOC_VERSION=3.20 # Set image metadata LABEL org.opencontainers.image.licenses="GPL-2.0-or-later" \