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Apptainer: Methylartist tries to download references for CRAM #324

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leonschuetz opened this issue Jan 14, 2025 · 0 comments

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leonschuetz commented Jan 14, 2025

Fails in container version:

2025-01-14T08:42:20.7180        DbnO        [E::easy_errno] Libcurl reported error 77 (Problem with the SSL CA cert (path? access rights?))
2025-01-14T08:42:20.7180        DbnO        [W::find_file_url] Failed to open reference "https://www.ebi.ac.uk/ena/cram/md5/5691468a67c7e7a7b5f2a3a683792c29": Input/output error

requires ref_cache?
should use BAM in complete analysis (pipeline test)

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