Not able to run hygieia-scm-github-graphql-collector jar file from local

[ShovanDhara]

Hi,

I'm having a problem when running https://github.com/Hygieia/hygieia-scm-github-graphql-collector (For public repo)

I'm trying to run the .jar file but it is showing me some error (See below log.). Hence not able to populate the dropdown in the UI(Screenshot).

`2022-06-29 12:46:39,294 [main] INFO com.capitalone.dashboard.Application - Starting Application v3.3.13-SNAPSHOT on SHODHARA-M-M2UH with PID 79060 (/Users/shovandhara/Downloads/Cisco/Hygieia/hygieia-scm-github-graphql-collector/target/github-graphql-scm-collector.jar started by shovandhara in /Users/shovandhara/Downloads/Cisco/Hygieia/hygieia-scm-github-graphql-collector/target)
2022-06-29 12:46:39,302 [main] INFO com.capitalone.dashboard.Application - No active profile set, falling back to default profiles: default
2022-06-29 12:46:39,411 [main] INFO o.s.b.c.e.AnnotationConfigEmbeddedWebApplicationContext - Refreshing org.springframework.boot.context.embedded.AnnotationConfigEmbeddedWebApplicationContext@5aebe890: startup date [Wed Jun 29 12:46:39 IST 2022]; root of context hierarchy
2022-06-29 12:46:39,785 [background-preinit] INFO o.h.validator.internal.util.Version - HV000001: Hibernate Validator 5.4.2.Final
WARNING: An illegal reflective access operation has occurred
WARNING: Illegal reflective access by org.springframework.cglib.core.ReflectUtils$1 (jar:file:/Users/shovandhara/Downloads/Cisco/Hygieia/hygieia-scm-github-graphql-collector/target/github-graphql-scm-collector.jar!/BOOT-INF/lib/spring-core-4.3.25.RELEASE.jar!/) to method java.lang.ClassLoader.defineClass(java.lang.String,byte[],int,int,java.security.ProtectionDomain)
WARNING: Please consider reporting this to the maintainers of org.springframework.cglib.core.ReflectUtils$1
WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
WARNING: All illegal access operations will be denied in a future release
2022-06-29 12:46:45,051 [main] INFO c.u.j.c.EnableEncryptablePropertiesBeanFactoryPostProcessor - Post-processing PropertySource instances
2022-06-29 12:46:45,096 [main] INFO c.u.j.EncryptablePropertySourceConverter - Converting PropertySource commandLineArgs [org.springframework.core.env.SimpleCommandLinePropertySource] to EncryptableEnumerablePropertySourceWrapper
2022-06-29 12:46:45,096 [main] INFO c.u.j.EncryptablePropertySourceConverter - Converting PropertySource servletConfigInitParams [org.springframework.core.env.PropertySource$StubPropertySource] to EncryptablePropertySourceWrapper
2022-06-29 12:46:45,096 [main] INFO c.u.j.EncryptablePropertySourceConverter - Converting PropertySource servletContextInitParams [org.springframework.core.env.PropertySource$StubPropertySource] to EncryptablePropertySourceWrapper
2022-06-29 12:46:45,096 [main] INFO c.u.j.EncryptablePropertySourceConverter - Converting PropertySource systemProperties [org.springframework.core.env.MapPropertySource] to EncryptableMapPropertySourceWrapper
2022-06-29 12:46:45,096 [main] INFO c.u.j.EncryptablePropertySourceConverter - Converting PropertySource systemEnvironment [org.springframework.core.env.SystemEnvironmentPropertySource] to EncryptableMapPropertySourceWrapper
2022-06-29 12:46:45,097 [main] INFO c.u.j.EncryptablePropertySourceConverter - Converting PropertySource random [org.springframework.boot.context.config.RandomValuePropertySource] to EncryptablePropertySourceWrapper
2022-06-29 12:46:45,251 [main] INFO o.s.c.s.PostProcessorRegistrationDelegate$BeanPostProcessorChecker - Bean 'org.springframework.security.access.expression.method.DefaultMethodSecurityExpressionHandler@2313052e' of type [org.springframework.security.access.expression.method.DefaultMethodSecurityExpressionHandler] is not eligible for getting processed by all BeanPostProcessors (for example: not eligible for auto-proxying)
2022-06-29 12:46:45,267 [main] INFO o.s.c.s.PostProcessorRegistrationDelegate$BeanPostProcessorChecker - Bean 'methodSecurityMetadataSource' of type [org.springframework.security.access.method.DelegatingMethodSecurityMetadataSource] is not eligible for getting processed by all BeanPostProcessors (for example: not eligible for auto-proxying)
2022-06-29 12:46:45,774 [main] INFO o.s.b.c.e.t.TomcatEmbeddedServletContainer - Tomcat initialized with port(s): 8080 (http)
2022-06-29 12:46:45,797 [main] INFO o.a.coyote.http11.Http11NioProtocol - Initializing ProtocolHandler ["http-nio-8080"]
2022-06-29 12:46:45,821 [main] INFO o.a.catalina.core.StandardService - Starting service [Tomcat]
2022-06-29 12:46:45,821 [main] INFO o.a.catalina.core.StandardEngine - Starting Servlet engine: [Apache Tomcat/8.5.70]
2022-06-29 12:46:45,948 [localhost-startStop-1] INFO o.a.c.c.C.[Tomcat].[localhost].[/] - Initializing Spring embedded WebApplicationContext
2022-06-29 12:46:45,949 [localhost-startStop-1] INFO o.s.web.context.ContextLoader - Root WebApplicationContext: initialization completed in 6538 ms
2022-06-29 12:46:46,401 [localhost-startStop-1] INFO c.c.dashboard.config.MongoConfig - ReplicaSetfalse
2022-06-29 12:46:46,634 [localhost-startStop-1] INFO c.c.dashboard.config.MongoConfig - Initializing Mongo Client server at: localhost:27017
2022-06-29 12:46:46,693 [localhost-startStop-1] INFO org.mongodb.driver.cluster - Cluster created with settings {hosts=[localhost:27017], mode=SINGLE, requiredClusterType=UNKNOWN, serverSelectionTimeout='30000 ms', maxWaitQueueSize=500}
2022-06-29 12:46:46,771 [localhost-startStop-1] INFO c.c.dashboard.config.MongoConfig - Connecting to Mongo: Mongo{options=MongoClientOptions{description='null', applicationName='null', compressors='[]', readPreference=primary, writeConcern=WriteConcern{w=null, wTimeout=null ms, fsync=null, journal=null, retryWrites=false, readConcern=com.mongodb.ReadConcern@0, codecRegistry=org.bson.codecs.configuration.ProvidersCodecRegistry@b2537b7b, serverSelector=null, clusterListeners=[], commandListeners=[], minConnectionsPerHost=0, maxConnectionsPerHost=100, threadsAllowedToBlockForConnectionMultiplier=5, serverSelectionTimeout=30000, maxWaitTime=120000, maxConnectionIdleTime=0, maxConnectionLifeTime=0, connectTimeout=10000, socketTimeout=0, socketKeepAlive=true, sslEnabled=false, sslInvalidHostNamesAllowed=false, sslContext=null, alwaysUseMBeans=false, heartbeatFrequency=10000, minHeartbeatFrequency=500, heartbeatConnectTimeout=20000, heartbeatSocketTimeout=20000, localThreshold=15, requiredReplicaSetName='null', dbDecoderFactory=com.mongodb.DefaultDBDecoder$1@8a48847, dbEncoderFactory=com.mongodb.DefaultDBEncoder$1@a383ae3, socketFactory=null, cursorFinalizerEnabled=true, connectionPoolSettings=ConnectionPoolSettings{maxSize=100, minSize=0, maxWaitQueueSize=500, maxWaitTimeMS=120000, maxConnectionLifeTimeMS=0, maxConnectionIdleTimeMS=0, maintenanceInitialDelayMS=0, maintenanceFrequencyMS=60000, connectionPoolListeners=[]}, socketSettings=SocketSettings{connectTimeoutMS=10000, readTimeoutMS=0, keepAlive=true, receiveBufferSize=0, sendBufferSize=0}, serverSettings=ServerSettings{heartbeatFrequencyMS=10000, minHeartbeatFrequencyMS=500, serverListeners='[]', serverMonitorListeners='[]'}, heartbeatSocketSettings=SocketSettings{connectTimeoutMS=20000, readTimeoutMS=20000, keepAlive=true, receiveBufferSize=0, sendBufferSize=0}}}
2022-06-29 12:46:46,816 [cluster-ClusterId{value='62bbfc5ef0752f34d4b53214', description='null'}-localhost:27017] INFO org.mongodb.driver.connection - Opened connection [connectionId{localValue:1, serverValue:154}] to localhost:27017
2022-06-29 12:46:46,822 [cluster-ClusterId{value='62bbfc5ef0752f34d4b53214', description='null'}-localhost:27017] INFO org.mongodb.driver.cluster - Monitor thread successfully connected to server with description ServerDescription{address=localhost:27017, type=STANDALONE, state=CONNECTED, ok=true, version=ServerVersion{versionList=[5, 0, 9]}, minWireVersion=0, maxWireVersion=13, maxDocumentSize=16777216, logicalSessionTimeoutMinutes=30, roundTripTimeNanos=4049615}
2022-06-29 12:46:47,227 [localhost-startStop-1] INFO o.s.b.w.s.FilterRegistrationBean - Mapping filter: 'characterEncodingFilter' to: [/]
2022-06-29 12:46:47,229 [localhost-startStop-1] INFO o.s.b.w.s.DelegatingFilterProxyRegistrationBean - Mapping filter: 'springSecurityFilterChain' to: [/]
2022-06-29 12:46:47,229 [localhost-startStop-1] INFO o.s.b.w.s.FilterRegistrationBean - Mapping filter: 'apiTokenRequestFilter' to: [/*]
2022-06-29 12:46:47,229 [localhost-startStop-1] INFO o.s.b.w.s.ServletRegistrationBean - Mapping servlet: 'dispatcherServlet' to [/]
2022-06-29 12:46:47,349 [main] INFO org.mongodb.driver.connection - Opened connection [connectionId{localValue:2, serverValue:155}] to localhost:27017
2022-06-29 12:46:47,709 [main] INFO o.s.s.c.ThreadPoolTaskScheduler - Initializing ExecutorService 'taskScheduler'
2022-06-29 12:46:48,084 [main] WARN o.s.b.c.e.AnnotationConfigEmbeddedWebApplicationContext - Exception encountered during context initialization - cancelling refresh attempt: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'gitHubCollectorTask': Invocation of init method failed; nested exception is java.lang.NullPointerException
2022-06-29 12:46:48,084 [main] INFO o.s.s.c.ThreadPoolTaskScheduler - Shutting down ExecutorService 'taskScheduler'
2022-06-29 12:46:48,086 [main] INFO o.a.catalina.core.StandardService - Stopping service [Tomcat]
2022-06-29 12:46:48,093 [localhost-startStop-1] WARN o.a.c.loader.WebappClassLoaderBase - The web application [ROOT] appears to have started a thread named [cluster-ClusterId{value='62bbfc5ef0752f34d4b53214', description='null'}-localhost:27017] but has failed to stop it. This is very likely to create a memory leak. Stack trace of thread:
[email protected]/jdk.internal.misc.Unsafe.park(Native Method)
[email protected]/java.util.concurrent.locks.LockSupport.parkNanos(LockSupport.java:234)
[email protected]/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.awaitNanos(AbstractQueuedSynchronizer.java:2123)
com.mongodb.connection.DefaultServerMonitor$ServerMonitorRunnable.waitForSignalOrTimeout(DefaultServerMonitor.java:226)
com.mongodb.connection.DefaultServerMonitor$ServerMonitorRunnable.waitForNext(DefaultServerMonitor.java:207)
com.mongodb.connection.DefaultServerMonitor$ServerMonitorRunnable.run(DefaultServerMonitor.java:154)
[email protected]/java.lang.Thread.run(Thread.java:829)
2022-06-29 12:46:48,094 [localhost-startStop-1] WARN o.a.c.loader.WebappClassLoaderBase - The web application [ROOT] appears to have started a thread named [CleanCursors-1-thread-1] but has failed to stop it. This is very likely to create a memory leak. Stack trace of thread:
[email protected]/jdk.internal.misc.Unsafe.park(Native Method)
[email protected]/java.util.concurrent.locks.LockSupport.parkNanos(LockSupport.java:234)
[email protected]/java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject.awaitNanos(AbstractQueuedSynchronizer.java:2123)
[email protected]/java.util.concurrent.ScheduledThreadPoolExecutor$DelayedWorkQueue.take(ScheduledThreadPoolExecutor.java:1182)
[email protected]/java.util.concurrent.ScheduledThreadPoolExecutor$DelayedWorkQueue.take(ScheduledThreadPoolExecutor.java:899)
[email protected]/java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.java:1054)
[email protected]/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1114)
[email protected]/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
[email protected]/java.lang.Thread.run(Thread.java:829)
2022-06-29 12:46:48,102 [main] INFO o.s.b.a.l.AutoConfigurationReportLoggingInitializer -

Error starting ApplicationContext. To display the auto-configuration report re-run your application with 'debug' enabled.
2022-06-29 12:46:48,109 [main] ERROR o.s.boot.SpringApplication - Application startup failed
org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'gitHubCollectorTask': Invocation of init method failed; nested exception is java.lang.NullPointerException
at org.springframework.beans.factory.annotation.InitDestroyAnnotationBeanPostProcessor.postProcessBeforeInitialization(InitDestroyAnnotationBeanPostProcessor.java:137)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyBeanPostProcessorsBeforeInitialization(AbstractAutowireCapableBeanFactory.java:407)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1622)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:553)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:481)
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:312)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:308)
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:197)
at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:756)
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:867)
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:542)
at org.springframework.boot.context.embedded.EmbeddedWebApplicationContext.refresh(EmbeddedWebApplicationContext.java:123)
at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:666)
at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:353)
at org.springframework.boot.SpringApplication.run(SpringApplication.java:300)
at org.springframework.boot.SpringApplication.run(SpringApplication.java:1082)
at org.springframework.boot.SpringApplication.run(SpringApplication.java:1071)
at com.capitalone.dashboard.Application.main(Application.java:24)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.boot.loader.MainMethodRunner.run(MainMethodRunner.java:48)
at org.springframework.boot.loader.Launcher.launch(Launcher.java:87)
at org.springframework.boot.loader.Launcher.launch(Launcher.java:51)
at org.springframework.boot.loader.JarLauncher.main(JarLauncher.java:52)
Caused by: java.lang.NullPointerException: null
at org.springframework.scheduling.support.CronSequenceGenerator.parse(CronSequenceGenerator.java:271)
at org.springframework.scheduling.support.CronSequenceGenerator.(CronSequenceGenerator.java:96)
at org.springframework.scheduling.support.CronSequenceGenerator.(CronSequenceGenerator.java:83)
at org.springframework.scheduling.support.CronTrigger.(CronTrigger.java:44)
at com.capitalone.dashboard.collector.CollectorTask.onStartup(CollectorTask.java:89)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.beans.factory.annotation.InitDestroyAnnotationBeanPostProcessor$LifecycleElement.invoke(InitDestroyAnnotationBeanPostProcessor.java:366)
at org.springframework.beans.factory.annotation.InitDestroyAnnotationBeanPostProcessor$LifecycleMetadata.invokeInitMethods(InitDestroyAnnotationBeanPostProcessor.java:311)
at org.springframework.beans.factory.annotation.InitDestroyAnnotationBeanPostProcessor.postProcessBeforeInitialization(InitDestroyAnnotationBeanPostProcessor.java:134)
... 26 common frames omitted
shovandhara@SHODHARA-M-M2UH target % clear
`

Here is my application.properties config -

dbname=dashboarddb
dbhost=localhost
dbport=27017
dbreplicaset=false
dbhostport=localhost:27017
dbusername=shodhara
dbpassword=Cancer2233!
logging.file=./logs/github.log
github.cron=0 0/1 * * * *

github.host=https://github.com/ShovanDhara/

github.firstRunHistoryDays=100
github.rateLimitThreshold=100

github.commitThresholdDays=15

github.errorThreshold=1

I'm using this command to run the .jar file

java -jar github-graphql-scm-collector.jar --spring.config.name=github --spring.config.location=application.properties

Api, DB Layer and UI are running fine

I'm not able to understand where I'm doing wrong

[stale]

This issue has been automatically marked as stale because it has not had recent activity. It will be closed if no further activity occurs. Thank you for your contributions.