3rd party tools

[ngehlenborg]

We should create a section in the README to list external tools that are build on Viv or use Viv-based tools. Here's a sampling:

Vitessce:

• http://vitessce.io

OME-NGFF:

• https://blog.openmicroscopy.org/file-formats/community/2020/11/04/zarr-data/
• https://blog.openmicroscopy.org/file-formats/community/2020/12/01/zarr-hcs/

ImJoy:

• https://imjoy.io/docs/#/i2k_tutorial?id=open-integration-with-imjoy

Galaxy will include the Avivator image viewer as the default visualization for OME-TIFF files:

• Make Avivator GEDA and sniffer for ome.tiff datatype galaxyproject/galaxy#10534

HuBMAP CCF EUI:

• https://github.com/hubmapconsortium/ccf-ui

[ilan-gold]

@ngehlenborg Should I add vizarr to this? Do you see this as separate from https://github.com/hms-dbmi/viv#related-software?

[ngehlenborg]

Yes, I would consider this separate for now, i.e., I wouldn't add Vizarr here for now.