higlass-manage view file.mcool -> ModuleNotFoundError

[mccalluc]

higlass-manage$ higlass-manage view ~/Downloads/4DNFI2A4OBS9.mcool 
Pulling latest image... 
done
Data directory: /Users/chuck/hg-data
Temp directory: ()
Starting... default 8989
Docker started: higlass-manage-container-default
sending request 1
...
Waiting to start (tilesets)...
...
Non 200 status code returned (502), waiting...
sending request 15
public_data: True
Replaced js file
Started
Inferred filetype: cooler
Inferred datatype: matrix
state True
Inferred datatype: matrix
state True
state True
name_text: 
hg_name: default
command: python higlass-server/manage.py ingest_tileset --filename /tmp/4DNFI2A4OBS9.mcool --filetype cooler --datatype matrix    --uid YFkVEOCtR_6w8HCkpdyAMg
Traceback (most recent call last):
  File "/Users/chuck/anaconda3/envs/higlass-tutorial/bin/higlass-manage", line 10, in <module>
    sys.exit(cli())
  File "/Users/chuck/anaconda3/envs/higlass-tutorial/lib/python3.7/site-packages/click/core.py", line 764, in __call__
    return self.main(*args, **kwargs)
  File "/Users/chuck/anaconda3/envs/higlass-tutorial/lib/python3.7/site-packages/click/core.py", line 717, in main
    rv = self.invoke(ctx)
  File "/Users/chuck/anaconda3/envs/higlass-tutorial/lib/python3.7/site-packages/click/core.py", line 1137, in invoke
    return _process_result(sub_ctx.command.invoke(sub_ctx))
  File "/Users/chuck/anaconda3/envs/higlass-tutorial/lib/python3.7/site-packages/click/core.py", line 956, in invoke
    return ctx.invoke(self.callback, **ctx.params)
  File "/Users/chuck/anaconda3/envs/higlass-tutorial/lib/python3.7/site-packages/click/core.py", line 555, in invoke
    return callback(*args, **kwargs)
  File "/Users/chuck/anaconda3/envs/higlass-tutorial/lib/python3.7/site-packages/higlass_manage/view.py", line 114, in view
    import higlass.client as hgc
ModuleNotFoundError: No module named 'higlass'

pip freeze:

$ pip freeze
asciitree==0.3.3
biopython==1.74
certifi==2019.6.16
chardet==3.0.4
Click==7.0
clodius==0.10.13
cooler==0.8.5
cytoolz==0.10.0
dask==2.2.0
dill==0.3.0
docker==4.0.2
h5py==2.9.0
higlass-manage==0.7.2
idna==2.8
multiprocess==0.70.8
negspy==0.2.22
nose==1.3.7
numpy==1.17.0
pandas==0.25.0
pybbi==0.2.0
pyfaidx==0.5.5.2
pypairix==0.3.7
pysam==0.15.3
python-dateutil==2.8.0
pytz==2019.2
PyYAML==5.1.2
requests==2.22.0
scipy==1.3.0
six==1.12.0
slugid==2.0.0
sortedcontainers==2.1.0
toolz==0.10.0
urllib3==1.25.3
websocket-client==0.56.0

In test.sh, we ingest before view, so maybe something is not being exercised with this path?

[pkerpedjiev]

See this PR: #43

Should be able to update to the latest version of higlass-python once that is merged.