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Glycan Enrichment tool similar to PANTHER #807

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JingyueWu opened this issue Oct 6, 2023 · 1 comment
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Glycan Enrichment tool similar to PANTHER #807

JingyueWu opened this issue Oct 6, 2023 · 1 comment
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@JingyueWu
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Keeney commented 2 weeks ago:
Enter a list of glycans, find over representation of pathways in those glycans.
Should use methodology that's been "beaten to death" in the RNAseq world, not reinvent the wheel.

Jingyue's notes per meeting 10/6:
Note - column 1: GlyTouCan ID (input list), column 2 abundance value, column 3 expected value, column 4 observed, column 5 p-value
Output - identical to what the PANTHER output is

Creating this ticket here as the original one is in BioCompute Objects repo and none of us have edit/comment/tag each other access.

@JingyueWu
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Original ticket link: biocompute-objects/playbook-partnership#30

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