[v0.4.2] - 2021-05-10
Fixed two issues: don't read hidden files from the input/
folder,
remove forgotten parameter that was removed in the previous release.
[v0.4.1] - 2021-05-05
- Fixed estimated optimal radius that was too large (513)
- Deprecate pixel coordinate support (509)
- Coordinates density map shows artifact in corners (511)
- Split A-D test into one test per feature (477)
[v0.4.0] - 2021-05-03
- Compensate cluster’s mass for binaries masses? (488)
- Estimate individual per-star masses (484)
- Improve performance of synth cluster generation (3) (506)
- Simplify isochrones download/handling (497)
- Add CS 37 COLIBRI track + deprecate old versions 10 & 11 of PARSEC (495)
- Optimal radius too large for some clusters (510)
- Project equatorial coordinates before processing (237)
- Add eccentricity parameter to KP fit? (480)
- Finish working on enhanced King profile fitting (456)
- Remove KDE_stds and mp_flag parameters (500)
- Simplify input of structure parameters (512)
- Deprecate all likelihoods except Tremmel (507)
- Interpolate IMF masses into the isochrones, not the other way around (503)
- Add minimum binary mass ratio to fundamental parameters? (504)
- Deprecate Anderson-Darling test (499)
- Deprecate “Read mode” (498)
- Add IMF and PMF curves obtention (96)
- Convert pixel coordinates to RA & DEC (203)
- Add ZAMS to CMD final plot (160)
- Add semi_input.dat checking to checker (214)
- Add weighted spatial density map (167)
- Generate output CMD-CCD plots for the mean+median+mode (479)
- Exact circle area using geometry instead of Monte Carlo (446)
- Use the maximum number of members in the optimal radius? (494)
- Add 1-sigma region to King profile (478)
- Turn off MP coloring in D2 plots for binned likelihoods (473)
[v0.3.1] - 2020-06-19
Only the ptemcee
method is kept, all others are now deprecated.
- Corrected an error in the
CMD_systs.dat
file (468) - Fixed
path
for
CMD_systs.dat
, now works in Windows (and Mac?) - Control (some) plotting parameters through custom style and allow the selection of one of the supported styles (464)
- Dump the results of the fundamental parameters analysis to file (467)
- Closed several issues related to the deprecated bootstrap(+GA), brute force, and emcee methods (265, 280, 284, 324, 341, 347, 418, 442, 447)
- Split D1 plots (MCMC convergence diagnostics plots & values) (389)
- Explore Zeus as a possible addition to the best fit process (457)
- Add mode, median to King’s profile plot (470)
- Make “trim frame” option per cluster (474)
- Closed due to old or not applicable (209, 293, 399)
[v0.3.0] - 2020-04-22
Massive changes introduced in this new version. Python 2.7.x is no longer supported.
- Port to Python 3 (243)
- Upgrade to
emcee
v3.0.2 (423) - Add
emcee
to the best fit process (193) - Upgraded to
astropy
v0.0.4 - Remove (z,a) steps (413)
- Bug fix: binary probabilities should not be averaged by
zaWAverage
(462) - Add Tremmel’s implementation of the PLR (447)
- Improve performance of synthetic cluster generation (445)
- Fix Tolstoy likelihood accounting for uncertainties twice (406)
- Add option to apply ’pmRA*cos(DE)’ correction (452)
- Added
optm
method to local removal of stars (432) - Added
manual
binning method to likelihood block (325) - New radius estimating method and many improvements to structural functions (RDP, field dens, radius) (454, 449, 346, 378)
- Added maximum likelihood method for fitting King profiles (268, 298)
- Allow seeding the synthetic cluster generation process (196)
- Add stopping condition to the plotting line (443)
- Add Nsigma region to the best fit synthetic cluster (460)
- Fix small bug in radii arrows (182)
[v0.2.7] - 2019-10-03
- Use inverse transform sampling to sample the IMF (434)
- Interpolation of (z,a) values uses wrong m_ini index (440)
- Interpolation of isochrone fails when (z,a) are both fixed (439)
- Mass ‘alignment’ in zaInterp() gives poor result (441)
- Select the N_mass_interp number automatically (438)
[v0.2.6] - 2019-09-19
- Fix normalization in Bayesian DA (426)
- Fix function to detect X11 that fails in Mac OS (Windows too?) (428)
- Merge
semi_input.dat
file intoparams_input.dat
and copy input file as output (427) - Remove modes (429)
- Use one photometric systems file instead of two identical ones (421)
- Fix Ext/Imm operator causing spurious points in the GA (424)
[v0.2.5] - 2019-08-07
- Added the
ptemcee
method, and deprecated (for now) the BF (367) - Accept a CMD/CCD from mixed photometric systems (228, 229)
- Add support for the new set of isochrones PARSEC+COLIBRI (322)
- Output all information obtained from the bootstrap (279)
- Mask stars with photometry outside of reasonable range (414)
- Add proper motions, parallax, and radial velocity support to Bayesian DA (220)
- Use stars with no complete data in the Bayesian equation (377).
- Add dimensional weights to Bayesian DA.
- Use all positions for structural functions (107).
- Make the bootstrap the actual method (instead of GA) (64)
- Make the GA work with floats instead of a grid (412)
- Plot the incomplete dataset with MPs information (411)
- Use a total number of masses, not a step value (410)
- Use stars after error rejection for LF & completeness (390)
- Switch to astropy’s read module (327) and allow reading columns by name.
- Update check for installed
packages
(newer
pip
threw an error). - Added a 2D cluster vs field KDE comparison, and the A-D test (255, 356)
- Added MAP, median and mode to output parameters.
- Added R2 normality estimator to distributions (401)
- Deprecated KDE p-value function.
- Deprecated
trim_frame
, andmanual
mode in photometric error rejection. - Deprecated integrated magnitude function.
- Store input parameters as .json for each cluster (126)
- Don’t read hidden files from the ‘isochrones’ folder (403)
- Use KDE instead of Gaussian filters (379)
- Split C2 plot into C2 and C3
[v0.2.4] - 2018-03-16
- Extend support for up to two colors.
- Improved performance
(#357):
- Make mass sampling optional (#373)
- Move binarity assignment outside of the synthetic cluster generation.
- Move isochrone sorting outside of the synthetic cluster generation.
- Move random floats for photometric errors outside of the synthetic cluster generation.
- Move random floats for completeness outside of the synthetic cluster generation. Code is now ~3.3X faster
[v0.2.3] - 2017-09-23
- Improved performance of synthetic cluster generation (#227). Code is now ~4X faster.
- Fix excessive use of memory by Rbf interpolation (#350)
- Use equal bin widths in LF and completeness function (#300)
- Faster star separation by errors (#351)
- Generalize Bayesian DA to N-dimensions, fix statistical issues, improve performance (#352)
[v0.2.2] - 2017-08-29
- Add weights to binned likelihood (#216)
- Fix bug in progress bar.
- Identify binaries in plotted HR diagram.
- Modify the information presented by the 2-parameters density plots. Takes care of #71.
- Smarter empty field region around cluster region (#345).
- Detect stars with duplicate IDs in data file (#212).
[v0.2.1] - 2017-08-11
- Fix issue with ‘tolstoy’ likelihood estimation (#340)
- Fix a couple of issues with the error curve fitting (#338)
- Add ‘fixed’ MPs algorithm (useful when no field region is available) (#326)
- Fix crash when obtaining error curve (#256)
[v0.2.0] - 2017-08-07
- Generalized code to accept an arbitrary CMD in any single photometric system supported by the CMD service (#24).
- Identify binary systems in synthetic clusters (#199).
- Plots are now produced per blocks, instead of all together at the end (#271)
- Switch dependency requirement from astroML to astropy (#303).
- Remove unused error rejection modes (#331)
- Simplify params_input.dat file (#217)
- Check that all metallicity files contain the same number of age values (#218)
- Add density maps analysis for center function (#164)
- Remove weight added to the observed cluster CMD’s histogram (#308)
- Fix bad parameter rounding (#248)
- Add ‘max mag’ cut for synthetic clusters (#302, #264)
- Simplify installation steps (#88, #315)
- Plot results of brute force minimization (#100)
- Make extinction parameter Rv a manual input parameter (#314)
- Use numpy’s binning methods (#317)
- Modify RDP limit (#294)
- Store extra data from theoretical isochrones (#201)
[v0.1.9.5] - 2016-08-07
- Remove forgotten print line.
- Print relevant information when data con not be read (#262).
- Fix bad range issue (#226).
[v0.1.9.4] - 2016-07-25
- Add support for five tracks from the CMD service (#276).
- Read metallicity files with underscores instead of decimal dots (#277).
- Several important structural changes
(#273): add
first_run
check, re-arrange and re-name modules, and move almost every part of the code into thepackages/
folder.
[v0.1.9.3] - 2016-05-25
- Add support for CMD in the HST/ACS WFC photometric system (requested by Daniel Arbelaez).
[v0.1.9.2] - 2016-04-17
- Add support for three CMDs in the Strömgren photometric system (requested by J. Hughes Clark).
- Change likelihood density plots to scatter plots which show more information.
- Add extra condition for DA break: minimum 10% of the runs must have passed.
- Fix bug with ‘mag’ mode in ‘Reduced membership’, wouldn’t run if the Bayesian DA was skipped.
- Fix minor bug (#241) when printing KP results to screen.
[v0.1.9.1] - 2015-08-25
- Fixed rounding of errors that returned 0. values if error was larger than value (#213).
- Check if
pip
module is installed + search for installed packages globally, not locally. - Catch badly formatted input data file.
- Restructure King radii obtention.
- Correctly plot stars in cluster region, not used in best fit function.
[v0.1.9] - 2015-06-18
(Warning: this release breaks compatibility with the previous
version of the params_input.dat
& semi_input.dat
files)
- Models (ie: isochrone + extinction +distance modulus + mass distribution + binarity) are now evaluated each time the GA selects them as a solution, thus a new mass distribution is generated (#186). This has a performance cost, but provides higher accuracy in the best model assignment process since a single model can now be evaluated with a slightly different mass distribution several times (only with GA, Brute Force method will only process a model once).
- Added an exit switch to the decontamination algorithm. It will stop iterations if the MPs converged to 0.1% tolerance values for all the stars in the cluster region (compared to the previous iteration). This speeds up the function considerably (#185).
- The upper mass value in the IMF can now be modified via the input parameters file.
- Code can now read
params_input_XX.dat
files when using lazy parallelization. - Number of field regions can now be set
individually
via the
semi_input.dat
file. - Added ‘bb’ binning method based on Bonnato & Bica (2007). Sets bin widths of 0.25 and 0.5 for colors and magnitudes respectively.
- Fixed bug in
manual
mode when displaying errors. - Fixed bug when narrow frames were plotted (#168).
- Moved text box outside of synthetic cluster’s plot to improve its visibility (#205).
- Closed #13. Saha’s W likelihood needs the number of model points to be fixed, which prevents it from being used when the mass varies. There’s nothing to be gained by adding this function.
- Caveat dragged from version 0.1.2 is resolved.
[v0.1.8] - 2015-04-09
(Warning: this release breaks compatibility with the previous
version of the params_input.dat
file)
- Added
local
andmp_05
methods to the selection of which stars to use in the best fit cluster parameter assignation process (#180, #183). - Added an automatic update checker function that notifies the user
if an updated version of
ASteCA
is available for download (#179). - Added grid lines over the photometric diagrams of the observed and synthetic cluster, showing the binning made by the method selected in each case (#131).
- Best fit synthetic cluster found is now saved to file (#154).
- Correctly obtain approximate number of members (
n_memb
) and contamination index (CI
) when the cluster radius extends beyond the RDP, thus making the field star density value (field_dens
) unreliable (#111). - Added
f10
flag to alert when thememb_par
value is greater than +-0.33, which means that there are twice as many estimated true members in either method (#175). - Improved
top_tiers
plotting and saved file (#184).
- Same as version 0.1.2.
[v0.1.7] - 2015-03-26
(Warning: this release breaks compatibility with the previous
version of the params_input.dat
file)
- Re-write
lowexp
error rejection method, now uses prediction bands instead of confidence intervals. - Force
matplotlib
’s backend to make the code work in servers. - Fixed
eyefit
method for error rejection. It changed after fixing #169. - Added SDSS
CMDs
g vs (u-g)
&g vs (g-r)
, at the request of Tjibaria Pijloo (Department of Astrophysics, Radboud University Nijmegen). - Fixed bug in binarity generation for the CMDs of the form
X vs (X-Y)
(#181). - Smarter selection of stars to be used by the best fit function, improvements in several plots (#171, #172).
- Best fit function can now accept a minimum magnitude value instead of just a minimum probability value (#115).
- Added a
memb_par
parameter to compare the number of approximate cluster members obtained via the structural analysis and via the decontamination algorithm (#162). - Code is now able to correctly read the names of files with more than one dot in it’s name.
- Fixed bad alphabetical ordering of input cluster files.
- Better limits for photometric diagram (#173).
- Fixed
DeprecationWarning
issue. - Invert x axis when RA cords are used (improved here).
- Several fixes and improvements made to plotted diagrams (5c7dc7f; 1642349; b57028c; 240178a; 9ec0ab8; fef14c4; db0df2a; 575ebe7; #177; #178).
- Same as version 0.1.2.
[v0.1.61] - 2015-03-04
- Added “lazy
parallelization”
ability. Now the user can run as many instances of the code as needed
simply by creating extra
asteca_xx.py
andinput_xx
folders wherexx
are integers of the form: 01, 02,…, 99. - Reposition
several text boxes in output images, newer versions of
matplotlib
moved them from the previous position. - Fix bad
import
of
rpy2
package, positioned incorrectly in two functions. - Fix
DeprecationWarning
showing whenexp_function
was used (#169).
- Same as version 0.1.2.
[v0.1.5] - 2015-03-03
(Warning: this release breaks compatibility with the previous
version of the params_input.dat
file)
- Improved radius assignment algorithm (#146).
- Detect cropped cluster region and use correct area when generating field regions (#139, #157).
- Fixed bug that crashed the code when top tiers synthetic clusters with no stars were plotted (#147). Added minimum total mass of 10Mo.
- Fixed bug where KDE p-values for field vs field comparison were artificially increased by comparing a field region with itself (#138).
- Obtain KDE p-value even if one field region is defined (#114).
- Fixed small bug that prevented integrated magnitude curves from being plotted (#145).
- Fixed several smaller bugs and issues (#110, #150, #140, #142, #141, #149, #95, #148, #136, #163, #143).
- Same as version 0.1.2.
[v0.1.4] - 2014-12-18
- Improved plotting of crowded fields (#62).
- Function to generate image is now more stable (#112). Re-arranged plots in output image.
- Add Top tiers models output (#130).
- Fixed small bug in KDE p-values function (#134).
- Minor re-arrangement with semi-input data.
- Same as version 0.1.2.
[v0.1.3] - 2014-12-10
- Accept arrays of non-equispaced parameter values instead of only equispaced ranges (#121).
- Added support for log-normal Chabrier (2001) IMF.
- More precise encoding/decoding in genetic algorithm.
- Functions separated into sections (#125).
- Input parameters set as global variables (#132).
- Same as version 0.1.2.
[v0.1.2] - 2014-12-01
- Likelihood method now supports Dolphin (2002) Poisson likelihood ratio function.
- Closed #120, #101, #129, #124, #102.
- Minor position fix for synthetic cluster text box in output plot.
- Brute force algorithm now returns correct errors.
- Some fixes for when unique values in the input parameter ranges are used ([1], [2]).
- Replaced deprecated compiler package used to flatten list.
- Still not sure why tolstoy likelihood is biased towards high masses :confused:
[v0.1.1] - 2014-11-07
More stable release.
- Same as previous version.
[v0.1.0] - 2014-10-08
First semi-stable buggy release
- Closed #72, #99, #37.
- Changed the way the IMF was sampled, now it should be faster and more precise.
- Some speed improvements (moved things around mainly).
- Binary fraction is now a free parameter.
- Serious bug: if the DA is set to run but the Best fit method
isn’t, the final plot can’t be produced since the
syn_cl_err
function isn’t used (fixed in next release). - Forgotten
print
prints out mass values every time the E/I operator is applied (fixed in next release). - If the number of points (
n_left
) in the radius finding function is smaller than 4, a very small radius is likely to be selected. Fixed in next release.
- The total initial mass can be set as a free parameter but the likelihood function will select always synthetic clusters of high mass. Thus it is advised to leave this parameter fixed to 1000 solar masses.
- The binary fraction found is not stored in the output data file.
- Some density map plots for mass and binary fraction are missing.
[v4.0.0-beta] - 2014-09-23
- Closed #85, #70, #43, #86.
- Metallicity and age now take steps in the GA.
- Add checker function to make sure certain parameters are set correctly before running.
- Number of points in
get_radius
increased 20% –> 25% of the RDP.
[v3.0.0-beta] - 2014-09-16
- Closed: #89, #77, #80.
- The
params_input.dat
andsemi_input.dat
files are now located at the top level next toasteca.py
. - Cluster’s photometric files are not longer required to be stored inside a sub-folder to be picked-up by the code.
[v2.0.1-beta] - 2014-09-15
- Correct version number.
[v2.0.0-beta] - 2014-09-11
- Closed issues: #15, #73, #53, #24, #75, #79, #81, #59, #83, #78, #69, #74.
- Changed name of package (OCAAT –> ASteCA).
- Added separate function to handle the spatial 2D histogram.
- Changes to
get_center
function (now hopefully simpler) - Added UBVI support for V vs (U-V).
- Added 2MASS CMD support for J vs (J-H), H vs (J-H) and K vs (H-K).
- Improve field star regions integrated magnitudes curve averaging.
- Simplify process of adding a new CMD.
- Added details on how the integrated magnitude calculation is done in the manual.
- Lots of minor edits/corrections.
[v1.0.0-beta] - 2014-08-24
First beta release
Version used (with some small changes) in the original article.