Some inferred annotations have the incorrect aspect

[ValWood]

from
#767

here for example:

PomBase SPAC14C4.08 mug5 contributes_to GO:0032118 PMID:25736293 IC GO:0106006 F dynactin complex subunit Mug5 protein taxon:4896 20170718 GOC-OWL part_of(GO:0032118)

The term annotated is
GO:0032118
GO:0032118 is A BIOLOGICAL PROCESS TERM
horsetail-astral microtubule organization (GO:0032118)

The aspect reported in the GAF file is F.

[ValWood]

@cmungall commented

Yes, owltools

incorrect aspect

The incorrect aspect issue was reported here: owlcollab/owltools#237

The ticket was not closed, but I believed it was fixed by HyeongSik with this PR, which was merged: owlcollab/owltools#239

However, it seems that he only implemented this for the basic annotation propagator, not for the annotation deepening.

Action: I can fix this, how high a priority is this for you?

Ultimately this code will be rewritten

[pgaudet]

If annotations are being exported, this seems high priority.

[ValWood]

It is a bug, but it has been around for a long time and doesn't seem to trip anyone up (which is strange). Probably not a lot of code checks that the aspect matches the GO term...

It is a bit shoddy though.....

[pgaudet]

Is this still an issue? I cannot find this annotation anymore, so I am closing. Please reopen if this is still a problem.

[ValWood]

I haven't seen this issue again since this was reported.