diff --git a/docs/gorules_test_errors.gaf b/docs/gorules_test_errors.gaf index 30cc98c3..3981eafa 100644 --- a/docs/gorules_test_errors.gaf +++ b/docs/gorules_test_errors.gaf @@ -71,6 +71,8 @@ UniProtKB A1B2F4 aztD acts_upstream_of_positive_effect GO:0097696 PMID:26468286 UniProtKB Q9HC96 CAPN10 involved_in GO:0006921 PMID: IDA P GORULE_TEST:0000001-29 Calpain-10 CAPN10,KIAA1845 protein taxon:9606 20140213 GO_Central ! FAILS GORULE:0000001 - TEST 30 - 2 values in 'with' field, second namespace missing UniProtKB Q6UW15 REG3G involved_in GO:0006401 PMID:16931762 IGI UniProtKB:P77335|A0A0K3AV08 P GORULE_TEST:0000001-30 Regenerating islet-derived protein 3-gamma REG3G|PAP1B|UNQ429/PRO162 protein taxon:9606 20220606 GO_Central +! FAILS GORULE:0000001 - TEST 31 - Two references in different ID spaces, space separated +FB FBgn0024811 Crk involved_in GO:0048010 FB:FBrf0180198 PMID:15457211 IMP P GORULE_TEST:0000001-31 Crk oncogene CED-2|CG1587|CRK|D-CRK|D-Crk|DCrk|Dcrk|crk|dCRK|dCrk protein taxon:7227 20180912 GO_Central ! FAILS GORULE:0000002 - TEST 1 - has a 'NOT' annotations to 'protein binding ; GO:0005515 UniProtKB O76187 darA NOT|enables GO:0005515 PMID:9802899 IPI UniProtKB:P34149 F GORULE_TEST:0000002-1 Darlin darA protein taxon:44689 20100205 GO_Central ! FAILS GORULE:0000002 - TEST 2 - has a 'NOT' annotations to 'binding ; GO:0005515 @@ -179,8 +181,6 @@ FB FBgn0020238 14-3-3epsilon involved_in GO:0006401 PMID:16931762 IGI FLYBASE:FB FB FBgn0020238 14-3-3epsilon involved_in GO:0006401 PMID:16931762 IGI FB:FBgn10004907 P GORULE_TEST:0000027-14 14-3-3epsilon 14-3-3|14-3-3 epsilon|14-3-3 protein epsilon protein taxon:7227 20220606 GO_Central ! SHOULD PASS GORULE:0000027 - TEST 15 - Two references in different ID spaces, pipe-separated FB FBgn0024811 Crk involved_in GO:0048010 FB:FBrf0180198|PMID:15457211 IMP P GORULE_TEST:0000027-15 Crk oncogene CED-2|CG1587|CRK|D-CRK|D-Crk|DCrk|Dcrk|crk|dCRK|dCrk protein taxon:7227 20180912 GO_Central -! FAILS GORULE:0000027 - TEST 16 - Two references in different ID spaces, space separated -FB FBgn0024811 Crk involved_in GO:0048010 FB:FBrf0180198 PMID:15457211 IMP P GORULE_TEST:0000027-16 Crk oncogene CED-2|CG1587|CRK|D-CRK|D-Crk|DCrk|Dcrk|crk|dCRK|dCrk protein taxon:7227 20180912 GO_Central ! FAILS GORULE:0000027 - TEST 17 - bad PMID ID syntax FB FBgn0024811 Crk involved_in GO:0048010 FB:FBrf0180198|PMID:1545721X IMP P GORULE_TEST:0000027-17 Crk oncogene CED-2|CG1587|CRK|D-CRK|D-Crk|DCrk|Dcrk|crk|dCRK|dCrk protein taxon:7227 20180912 GO_Central ! SHOULD PASS GORULE:0000027 - TEST 18 - 'Assigned by' is in groups.yaml (but not in dbxref.yaml)