diff --git a/pybwa/libbwamem.pyx b/pybwa/libbwamem.pyx index df71e89..aec8bbd 100644 --- a/pybwa/libbwamem.pyx +++ b/pybwa/libbwamem.pyx @@ -792,7 +792,6 @@ cdef class BwaMem: cdef bseq1_t* seq cdef char* s_char cdef kstring_t* kstr - cdef mem_alnreg_v mem_alnregs cdef int take_all cdef size_t j cdef char **XA @@ -926,8 +925,6 @@ cdef class BwaMem: else: self._add_sa_tag(mapped_recs) recs_to_return.append(mapped_recs) - sys.stderr.write(f"[loop] end free'ing mem_alnregs.a i={i}\n") - free(mem_alnregs.a) sys.stderr.write(f"[loop] end free'ing\n") for i in range(num_seqs):