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DESCRIPTION
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Package: phylobase
Type: Package
Title: Base Package for Phylogenetic Structures and Comparative Data
Version: 0.8.12
Imports:
ade4,
ape (>= 3.0),
Rcpp (>= 0.11.0),
rncl (>= 0.6.0),
grid,
methods,
stats,
RNeXML
LinkingTo: Rcpp
Suggests:
MASS,
testthat (>= 0.8.1),
knitr,
rmarkdown
Author: R Hackathon et al. (alphabetically: Ben Bolker, Marguerite Butler,
Peter Cowan, Damien de Vienne, Dirk Eddelbuettel, Mark Holder, Thibaut
Jombart, Steve Kembel, Francois Michonneau, David Orme, Brian O'Meara,
Emmanuel Paradis, Jim Regetz, Derrick Zwickl)
Maintainer: Francois Michonneau <[email protected]>
Description: Provides a base S4 class for comparative methods, incorporating
one or more trees and trait data.
License: GPL (>= 2)
URL: https://github.com/fmichonneau/phylobase
BugReports: https://github.com/fmichonneau/phylobase/issues
LazyData: true
Collate:
'oldclasses-class.R'
'internal-constructors.R'
'phylo4-methods.R'
'RcppExports.R'
'checkdata.R'
'phylo4-class.R'
'getNode-methods.R'
'formatData.R'
'phylo4d-class.R'
'phylo4d-methods.R'
'MRCA-methods.R'
'addData-methods.R'
'ancestors.R'
'phylo4-accessors.R'
'root-methods.R'
'nodeId-methods.R'
'edgeLength-methods.R'
'setAs-methods.R'
'extractTree.R'
'labels-methods.R'
'multiphylo4-class.R'
'pdata.R'
'phylo4d-accessors.R'
'phylobase-package.R'
'phylobase.options.R'
'phylomats-class.R'
'print-methods.R'
'readNCL.R'
'reorder-methods.R'
'shortestPath-methods.R'
'subset-methods.R'
'summary-methods.R'
'tbind.R'
'tdata-methods.R'
'treePlot.R'
'treestruc.R'
'zzz.R'
VignetteBuilder: knitr
RoxygenNote: 7.3.1
Encoding: UTF-8