From 3fd42fe7c6e43ac67aaa976e0259efc976d3aa50 Mon Sep 17 00:00:00 2001
From: Nicolas Brichet <nicolas.brichet@quantstack.net>
Date: Wed, 20 Nov 2024 14:22:28 +0100
Subject: [PATCH 1/5] Switch from full windowing mode to no windowing before
 starting presenter

---
 js/jupyterlab-deck/src/notebook/presenter.ts | 17 +++++++++++++++++
 1 file changed, 17 insertions(+)

diff --git a/js/jupyterlab-deck/src/notebook/presenter.ts b/js/jupyterlab-deck/src/notebook/presenter.ts
index 81afb4e..cdb7e66 100644
--- a/js/jupyterlab-deck/src/notebook/presenter.ts
+++ b/js/jupyterlab-deck/src/notebook/presenter.ts
@@ -62,6 +62,8 @@ export class NotebookPresenter implements IPresenter<NotebookPanel> {
   protected _extents = new Map<INotebookModel, NotebookPresenter.TExtentMap>();
   protected _layers = new Map<INotebookModel, NotebookPresenter.TLayerMap>();
 
+  private _windowingModeBackup: 'defer' | 'full' | 'none' = 'full';
+
   constructor(options: NotebookPresenter.IOptions) {
     this._manager = options.manager;
     this._commands = options.commands;
@@ -90,6 +92,13 @@ export class NotebookPresenter implements IPresenter<NotebookPanel> {
     }
     this._removeStyle(panel);
     panel.content.activeCellChanged.disconnect(this._onActiveCellChanged, this);
+
+    // restore the windowing mode of the notebook.
+    panel.content.notebookConfig = {
+      ...panel.content.notebookConfig,
+      windowingMode: this._windowingModeBackup
+    };
+
     panel.update();
 
     const { activeCell } = panel.content;
@@ -106,6 +115,14 @@ export class NotebookPresenter implements IPresenter<NotebookPanel> {
 
   public async start(panel: NotebookPanel): Promise<void> {
     const { model, content: notebook } = panel;
+
+    // Switch to not windowing mode
+    this._windowingModeBackup = notebook.notebookConfig.windowingMode;
+    notebook.notebookConfig = {...panel.content.notebookConfig, windowingMode: 'none'};
+    // Force viewport properties that may not be properly set, depending on lab version.
+    notebook.viewportNode.style.minHeight = '';
+    (notebook.viewportNode.parentNode as HTMLDivElement).style.height = '';
+
     if (model) {
       const _watchPanel = async (change: any) => {
         /* istanbul ignore if */

From b8eff6478967d2a2a55dbb48fb224b0b27fec238 Mon Sep 17 00:00:00 2001
From: Nicolas Brichet <nicolas.brichet@quantstack.net>
Date: Wed, 20 Nov 2024 18:02:13 +0100
Subject: [PATCH 2/5] Fix white background

---
 js/jupyterlab-deck/style/shell.css | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/js/jupyterlab-deck/style/shell.css b/js/jupyterlab-deck/style/shell.css
index 9fe6eb4..8adbc49 100644
--- a/js/jupyterlab-deck/style/shell.css
+++ b/js/jupyterlab-deck/style/shell.css
@@ -1,4 +1,5 @@
-body[data-jp-deck-mode='presenting'] {
+body[data-jp-deck-mode='presenting'],
+body[data-jp-deck-mode='presenting'] .jp-ThemedContainer:has(.jp-Deck){
   background: var(--jp-layout-color0);
 }
 

From a00de4f44cf27ec15fc6426ee0c8d0064600ab89 Mon Sep 17 00:00:00 2001
From: Nicolas Brichet <nicolas.brichet@quantstack.net>
Date: Thu, 21 Nov 2024 14:39:18 +0100
Subject: [PATCH 3/5] Fix background in notebook application

---
 js/jupyterlab-deck/style/shell.css | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/js/jupyterlab-deck/style/shell.css b/js/jupyterlab-deck/style/shell.css
index 8adbc49..611751e 100644
--- a/js/jupyterlab-deck/style/shell.css
+++ b/js/jupyterlab-deck/style/shell.css
@@ -1,5 +1,6 @@
 body[data-jp-deck-mode='presenting'],
-body[data-jp-deck-mode='presenting'] .jp-ThemedContainer:has(.jp-Deck){
+body[data-jp-deck-mode='presenting'] .jp-ThemedContainer:has(.jp-Deck),
+body[data-jp-deck-mode='presenting'][data-notebook='notebooks'] .jp-WindowedPanel-outer {
   background: var(--jp-layout-color0);
 }
 

From 73dd97b3b318150586a539022961cfdfc81387b7 Mon Sep 17 00:00:00 2001
From: Nicolas Brichet <nicolas.brichet@quantstack.net>
Date: Thu, 21 Nov 2024 14:42:39 +0100
Subject: [PATCH 4/5] update dependency and fix keyboard shortcuts

---
 js/jupyterlab-deck/package.json              |   16 +-
 js/jupyterlab-deck/src/manager.ts            |    9 +-
 js/jupyterlab-deck/src/notebook/presenter.ts |    7 +-
 js/jupyterlab-deck/src/plugin.ts             |    5 +-
 js/jupyterlab-deck/style/notebook.css        |    5 +
 pyproject.toml                               |    2 +-
 yarn.lock                                    | 1598 ++++++++++--------
 7 files changed, 943 insertions(+), 699 deletions(-)

diff --git a/js/jupyterlab-deck/package.json b/js/jupyterlab-deck/package.json
index 84d0b2b..1237628 100644
--- a/js/jupyterlab-deck/package.json
+++ b/js/jupyterlab-deck/package.json
@@ -21,18 +21,18 @@
   },
   "types": "lib/index.d.ts",
   "dependencies": {
-    "@jupyterlab/application": "3 || 4",
-    "@jupyterlab/apputils": "3 || 4",
-    "@jupyterlab/fileeditor": "3 || 4",
-    "@jupyterlab/markdownviewer": "3 || 4",
-    "@jupyterlab/notebook": "3 || 4",
-    "@jupyterlab/statusbar": "3 || 4",
-    "@jupyterlab/ui-components": "3 || 4",
+    "@jupyterlab/application": "^4.1.0",
+    "@jupyterlab/apputils": "^4.2.0",
+    "@jupyterlab/fileeditor": "^4.1.0",
+    "@jupyterlab/markdownviewer": "^4.1.0",
+    "@jupyterlab/notebook": "^4.1.0",
+    "@jupyterlab/statusbar": "^4.1.0",
+    "@jupyterlab/ui-components": "^4.1.0",
     "d3-drag": "3"
   },
   "devDependencies": {
     "@deathbeds/jupyterlab-fonts": "^3.0.0",
-    "@jupyter-notebook/application": "^7.0.5",
+    "@jupyter-notebook/application": "^7.1.0",
     "@jupyterlab/builder": "^4.0.7",
     "@types/d3-drag": "3"
   },
diff --git a/js/jupyterlab-deck/src/manager.ts b/js/jupyterlab-deck/src/manager.ts
index fe922de..566210d 100644
--- a/js/jupyterlab-deck/src/manager.ts
+++ b/js/jupyterlab-deck/src/manager.ts
@@ -44,6 +44,7 @@ export class DeckManager implements IDeckManager {
   protected _designTools: DesignTools | null = null;
   protected _settings: Promise<ISettingRegistry.ISettings>;
   protected _labShell?: LabShell | null;
+  protected _notebookShell?: INotebookShell | null;
   protected _dockPanel: DockPanel | null = null;
   protected _shell: JupyterFrontEnd.IShell;
   protected _statusbar: StatusBar | null;
@@ -508,15 +509,16 @@ export class DeckManager implements IDeckManager {
   }
 
   protected get _shellActiveWidget(): Widget | null {
-    const { _labShell, _shell, _dockPanel } = this;
+    const { _labShell, _notebookShell, _dockPanel } = this;
     if (_labShell && _dockPanel) {
       if (_labShell.activeWidget) {
         return _labShell.activeWidget;
       }
       return getSelectedWidget(_dockPanel);
-    } else {
-      return (_shell as INotebookShell).currentWidget || null;
+    } else if (_notebookShell) {
+      return _notebookShell.currentWidget || null;
     }
+    return null;
   }
 
   protected async _onSettingsChanged() {
@@ -601,6 +603,7 @@ export namespace DeckManager {
   export interface IOptions {
     commands: CommandRegistry;
     labShell: ILabShell | null;
+    notebookShell: INotebookShell | null;
     shell: JupyterFrontEnd.IShell;
     translator: TranslationBundle;
     statusbar: StatusBar | null;
diff --git a/js/jupyterlab-deck/src/notebook/presenter.ts b/js/jupyterlab-deck/src/notebook/presenter.ts
index cdb7e66..4808dfe 100644
--- a/js/jupyterlab-deck/src/notebook/presenter.ts
+++ b/js/jupyterlab-deck/src/notebook/presenter.ts
@@ -324,7 +324,7 @@ export class NotebookPresenter implements IPresenter<NotebookPanel> {
       this._commands.addKeyBinding({
         command: CommandIds[direction],
         keys: DIRECTION_KEYS[direction],
-        selector: `.${CSS.deck} .jp-Notebook.jp-mod-commandMode:focus`,
+        selector: `.${CSS.deck} .jp-Notebook.jp-mod-commandMode:not(.jp-mod-readWrite) :focus`,
       });
     }
     for (const [directions, keys] of COMPOUND_KEYS.entries()) {
@@ -333,7 +333,7 @@ export class NotebookPresenter implements IPresenter<NotebookPanel> {
         command: CommandIds.go,
         args: { direction, alternate },
         keys,
-        selector: `.${CSS.deck} .jp-Notebook.jp-mod-commandMode:focus`,
+        selector: `.${CSS.deck} .jp-Notebook.jp-mod-commandMode:not(.jp-mod-readWrite) :focus`,
       });
     }
   }
@@ -522,6 +522,9 @@ export class NotebookPresenter implements IPresenter<NotebookPanel> {
     if (this._manager.layover) {
       this._manager.layover.model.parts = onScreen;
     }
+
+    // Force the focus on the new active cell.
+    notebook.activeCell?.node.focus();
   }
 
   protected _forceStyle() {
diff --git a/js/jupyterlab-deck/src/plugin.ts b/js/jupyterlab-deck/src/plugin.ts
index 7bd63af..b65c9bc 100644
--- a/js/jupyterlab-deck/src/plugin.ts
+++ b/js/jupyterlab-deck/src/plugin.ts
@@ -1,4 +1,5 @@
 import { IFontManager } from '@deathbeds/jupyterlab-fonts';
+import { INotebookShell } from '@jupyter-notebook/application';
 import {
   JupyterFrontEnd,
   JupyterFrontEndPlugin,
@@ -32,7 +33,7 @@ import '../style/index.css';
 const plugin: JupyterFrontEndPlugin<IDeckManager> = {
   id: `${NS}:plugin`,
   requires: [ITranslator, ISettingRegistry, IFontManager],
-  optional: [ILabShell, ILayoutRestorer, ICommandPalette, IStatusBar],
+  optional: [ILabShell, INotebookShell, ILayoutRestorer, ICommandPalette, IStatusBar],
   provides: IDeckManager,
   autoStart: true,
   activate: (
@@ -41,6 +42,7 @@ const plugin: JupyterFrontEndPlugin<IDeckManager> = {
     settings: ISettingRegistry,
     fonts: IFontManager,
     labShell?: ILabShell,
+    notebookShell?: INotebookShell,
     restorer?: ILayoutRestorer,
     palette?: ICommandPalette,
     statusbar?: IStatusBar,
@@ -54,6 +56,7 @@ const plugin: JupyterFrontEndPlugin<IDeckManager> = {
       commands,
       shell,
       labShell: labShell || null,
+      notebookShell: notebookShell || null,
       translator: (translator || /* istanbul ignore next */ nullTranslator).load(NS),
       statusbar: theStatusBar,
       fonts,
diff --git a/js/jupyterlab-deck/style/notebook.css b/js/jupyterlab-deck/style/notebook.css
index f8e3207..a8682c1 100644
--- a/js/jupyterlab-deck/style/notebook.css
+++ b/js/jupyterlab-deck/style/notebook.css
@@ -95,6 +95,11 @@ body[data-notebook='notebooks']
   position: fixed;
 }
 
+/** cell focus not visible **/
+.jp-Deck .jp-Notebook.jp-mod-commandMode .jp-Cell.jp-mod-active:focus-visible {
+  box-shadow: none;
+}
+
 /** markdown tweaks **/
 .jp-Deck .jp-MarkdownOutput {
   border: 0;
diff --git a/pyproject.toml b/pyproject.toml
index e6b8a41..0bc1023 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -23,7 +23,7 @@ classifiers = [
 requires-python = ">=3.8"
 dynamic = ["description"]
 dependencies = [
-    "jupyterlab >=3.5,<5.0.0a0",
+    "jupyterlab >=4.1,<5.0.0a0",
     "jupyterlab-fonts >=3.0.0"
 ]
 
diff --git a/yarn.lock b/yarn.lock
index 8f7e050..e92e5f7 100644
--- a/yarn.lock
+++ b/yarn.lock
@@ -265,9 +265,9 @@ __metadata:
   languageName: node
   linkType: hard
 
-"@codemirror/autocomplete@npm:^6.0.0, @codemirror/autocomplete@npm:^6.3.2, @codemirror/autocomplete@npm:^6.5.1, @codemirror/autocomplete@npm:^6.7.1":
-  version: 6.11.1
-  resolution: "@codemirror/autocomplete@npm:6.11.1"
+"@codemirror/autocomplete@npm:^6.0.0, @codemirror/autocomplete@npm:^6.16.0, @codemirror/autocomplete@npm:^6.3.2, @codemirror/autocomplete@npm:^6.7.1":
+  version: 6.18.3
+  resolution: "@codemirror/autocomplete@npm:6.18.3"
   dependencies:
     "@codemirror/language": ^6.0.0
     "@codemirror/state": ^6.0.0
@@ -278,19 +278,19 @@ __metadata:
     "@codemirror/state": ^6.0.0
     "@codemirror/view": ^6.0.0
     "@lezer/common": ^1.0.0
-  checksum: 69cb77d51dbc4c76a990fb8e562075d6fa11b2aef00fce33d2a98dd701f6a89050b1b464ae8ee1e2cbe1a4210522b1a3c2260cdf5c933a062093acaf98a5eedc
+  checksum: 48f3a09e05a2ab236641c3df0dbd577ef4c04da8ea8c26c47bc90f5652342a62d6e736e6b89428a85ff50efe039c01f0f0864134914a40a1513a4d57024cbb76
   languageName: node
   linkType: hard
 
-"@codemirror/commands@npm:^6.2.3":
-  version: 6.3.2
-  resolution: "@codemirror/commands@npm:6.3.2"
+"@codemirror/commands@npm:^6.5.0":
+  version: 6.7.1
+  resolution: "@codemirror/commands@npm:6.7.1"
   dependencies:
     "@codemirror/language": ^6.0.0
-    "@codemirror/state": ^6.2.0
-    "@codemirror/view": ^6.0.0
+    "@codemirror/state": ^6.4.0
+    "@codemirror/view": ^6.27.0
     "@lezer/common": ^1.1.0
-  checksum: 683c444d8e6ad889ab5efd0d742b0fa28b78c8cad63276ec60d298b13d4939c8bd7e1d6fd3535645b8d255147de0d3aef46d89a29c19d0af58a7f2914bdcb3ab
+  checksum: 507ae0cc7f3a7bd869bca0de7e942ecb2bc0bd95a42484e5b06835ebf8caf7626c39d2bea26cefab99d07ab83ba5934afd2d07ce00dac4190aca014523f3c97e
   languageName: node
   linkType: hard
 
@@ -304,22 +304,22 @@ __metadata:
   languageName: node
   linkType: hard
 
-"@codemirror/lang-css@npm:^6.0.0, @codemirror/lang-css@npm:^6.1.1":
-  version: 6.2.1
-  resolution: "@codemirror/lang-css@npm:6.2.1"
+"@codemirror/lang-css@npm:^6.0.0, @codemirror/lang-css@npm:^6.2.1":
+  version: 6.3.0
+  resolution: "@codemirror/lang-css@npm:6.3.0"
   dependencies:
     "@codemirror/autocomplete": ^6.0.0
     "@codemirror/language": ^6.0.0
     "@codemirror/state": ^6.0.0
     "@lezer/common": ^1.0.2
-    "@lezer/css": ^1.0.0
-  checksum: 5a8457ee8a4310030a969f2d3128429f549c4dc9b7907ee8888b42119c80b65af99093801432efdf659b8ec36a147d2a947bc1ecbbf69a759395214e3f4834a8
+    "@lezer/css": ^1.1.7
+  checksum: e98e89fa436f0a27c95323efbb6a1c43a52ca0b9253ab3c12af16f38cb93670d42f8a63cc566e2f6b0348af2cdfa1a6c03cf045af2d6cb253b27b2efdce9b2b2
   languageName: node
   linkType: hard
 
-"@codemirror/lang-html@npm:^6.0.0, @codemirror/lang-html@npm:^6.4.3":
-  version: 6.4.7
-  resolution: "@codemirror/lang-html@npm:6.4.7"
+"@codemirror/lang-html@npm:^6.0.0, @codemirror/lang-html@npm:^6.4.9":
+  version: 6.4.9
+  resolution: "@codemirror/lang-html@npm:6.4.9"
   dependencies:
     "@codemirror/autocomplete": ^6.0.0
     "@codemirror/lang-css": ^6.0.0
@@ -330,7 +330,7 @@ __metadata:
     "@lezer/common": ^1.0.0
     "@lezer/css": ^1.1.0
     "@lezer/html": ^1.3.0
-  checksum: 26e3d9243bd8dea2c0f7769315f8ed4b77969497f52c545c84ff32f155489b3a29e476aa78ffc11e910a0f927bbebce4d28f4e17e1994f6c9d8df6bdd3c33ef1
+  checksum: ac8c3ceb0396f2e032752c5079bd950124dca708bc64e96fc147dc5fe7133e5cee0814fe951abdb953ec1d11fa540e4b30a712b5149d9a36016a197a28de45d7
   languageName: node
   linkType: hard
 
@@ -344,9 +344,9 @@ __metadata:
   languageName: node
   linkType: hard
 
-"@codemirror/lang-javascript@npm:^6.0.0, @codemirror/lang-javascript@npm:^6.1.7":
-  version: 6.2.1
-  resolution: "@codemirror/lang-javascript@npm:6.2.1"
+"@codemirror/lang-javascript@npm:^6.0.0, @codemirror/lang-javascript@npm:^6.2.2":
+  version: 6.2.2
+  resolution: "@codemirror/lang-javascript@npm:6.2.2"
   dependencies:
     "@codemirror/autocomplete": ^6.0.0
     "@codemirror/language": ^6.6.0
@@ -355,7 +355,7 @@ __metadata:
     "@codemirror/view": ^6.17.0
     "@lezer/common": ^1.0.0
     "@lezer/javascript": ^1.0.0
-  checksum: 3df38c4cced06195283a9a2a9365aaa7c8c1b157852b331bc3a118403f774bbba57d2a392de52f5e28d2b344a323bc0146bcf7c8ef8be2473f167d815e4a37cd
+  checksum: 66379942a8347dff2bd76d10ed7cf313bca83872f8336fdd3e14accfef23e7b690cd913c9d11a3854fba2b32299da07fc3275995327642c9ee43c2a8e538c19d
   languageName: node
   linkType: hard
 
@@ -369,18 +369,18 @@ __metadata:
   languageName: node
   linkType: hard
 
-"@codemirror/lang-markdown@npm:^6.1.1":
-  version: 6.2.3
-  resolution: "@codemirror/lang-markdown@npm:6.2.3"
+"@codemirror/lang-markdown@npm:^6.2.5":
+  version: 6.3.1
+  resolution: "@codemirror/lang-markdown@npm:6.3.1"
   dependencies:
     "@codemirror/autocomplete": ^6.7.1
     "@codemirror/lang-html": ^6.0.0
     "@codemirror/language": ^6.3.0
     "@codemirror/state": ^6.0.0
     "@codemirror/view": ^6.0.0
-    "@lezer/common": ^1.0.0
+    "@lezer/common": ^1.2.1
     "@lezer/markdown": ^1.0.0
-  checksum: 9b9e13cca288c36c68ad7e2cc5058cb4da2232e74479124c4952ecd2310d2e91f182c606414680570218119ceae99bdab6540dce081ce564030c9e4cadc96a64
+  checksum: cd0281c6b7130b2f12903c82a2f36b53b428002577a9fdab09de810a95ef0db5049ef951e2a065b0f38b42af854bee176492238e5ab116099e4799950638cadc
   languageName: node
   linkType: hard
 
@@ -397,14 +397,16 @@ __metadata:
   languageName: node
   linkType: hard
 
-"@codemirror/lang-python@npm:^6.1.3":
-  version: 6.1.3
-  resolution: "@codemirror/lang-python@npm:6.1.3"
+"@codemirror/lang-python@npm:^6.1.6":
+  version: 6.1.6
+  resolution: "@codemirror/lang-python@npm:6.1.6"
   dependencies:
     "@codemirror/autocomplete": ^6.3.2
     "@codemirror/language": ^6.8.0
+    "@codemirror/state": ^6.0.0
+    "@lezer/common": ^1.2.1
     "@lezer/python": ^1.1.4
-  checksum: 65a0276a4503e4e3b70dd28d1c93ef472632b6d2c4bf3ae92d305d14ee8cf60b0bbbf62d5ceb51294de9598d9e2d42eafcde26f317ee7b90d0a11dfa863c1d1a
+  checksum: eb1faabd332bb95d0f3e227eb19ac5a31140cf238905bbe73e061040999f5680a012f9145fb3688bc2fcbb1908c957511edc8eeb8a9aa88d27d4fa55ad451e95
   languageName: node
   linkType: hard
 
@@ -418,63 +420,66 @@ __metadata:
   languageName: node
   linkType: hard
 
-"@codemirror/lang-sql@npm:^6.4.1":
-  version: 6.5.4
-  resolution: "@codemirror/lang-sql@npm:6.5.4"
+"@codemirror/lang-sql@npm:^6.6.4":
+  version: 6.8.0
+  resolution: "@codemirror/lang-sql@npm:6.8.0"
   dependencies:
     "@codemirror/autocomplete": ^6.0.0
     "@codemirror/language": ^6.0.0
     "@codemirror/state": ^6.0.0
+    "@lezer/common": ^1.2.0
     "@lezer/highlight": ^1.0.0
     "@lezer/lr": ^1.0.0
-  checksum: face21b0231ac5a7981949b5bf6a99ed092d0d6f7eb83f35dcd31d56ecf07dafa19d21623e0bad36cec7a12e3149df7b45c3588aeee31eae41e9b05942c4fdd7
+  checksum: 1b5a3c8129b09f24039d8c0906fc4cb8d0f706a424a1d56721057bd1e647797c2b1240bb53eed9bf2bac5806a4e0363e555a3963f04c478efa05829890c537f7
   languageName: node
   linkType: hard
 
-"@codemirror/lang-wast@npm:^6.0.1":
-  version: 6.0.1
-  resolution: "@codemirror/lang-wast@npm:6.0.1"
+"@codemirror/lang-wast@npm:^6.0.2":
+  version: 6.0.2
+  resolution: "@codemirror/lang-wast@npm:6.0.2"
   dependencies:
     "@codemirror/language": ^6.0.0
+    "@lezer/common": ^1.2.0
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+  checksum: 853f8ebd5b425d350bffa97dd6958143179a5938352ccae092c62d1267c4e392a039be1bae7d51b6e4ffad25f51f9617531fedf5237f15df302ccfb452cbf2d7
   languageName: node
   linkType: hard
 
@@ -5378,6 +5587,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"exenv-es6@npm:^1.1.1":
+  version: 1.1.1
+  resolution: "exenv-es6@npm:1.1.1"
+  checksum: 7f2aa12025e6f06c48dc286f380cf3183bb19c6017b36d91695034a3e5124a7235c4f8ff24ca2eb88ae801322f0f99605cedfcfd996a5fcbba7669320e2a448e
+  languageName: node
+  linkType: hard
+
 "exponential-backoff@npm:^3.1.1":
   version: 3.1.1
   resolution: "exponential-backoff@npm:3.1.1"
@@ -6242,15 +6458,15 @@ __metadata:
   languageName: node
   linkType: hard
 
-"htmlparser2@npm:^6.0.0":
-  version: 6.1.0
-  resolution: "htmlparser2@npm:6.1.0"
+"htmlparser2@npm:^8.0.0":
+  version: 8.0.2
+  resolution: "htmlparser2@npm:8.0.2"
   dependencies:
-    domelementtype: ^2.0.1
-    domhandler: ^4.0.0
-    domutils: ^2.5.2
-    entities: ^2.0.0
-  checksum: 81a7b3d9c3bb9acb568a02fc9b1b81ffbfa55eae7f1c41ae0bf840006d1dbf54cb3aa245b2553e2c94db674840a9f0fdad7027c9a9d01a062065314039058c4e
+    domelementtype: ^2.3.0
+    domhandler: ^5.0.3
+    domutils: ^3.0.1
+    entities: ^4.4.0
+  checksum: 29167a0f9282f181da8a6d0311b76820c8a59bc9e3c87009e21968264c2987d2723d6fde5a964d4b7b6cba663fca96ffb373c06d8223a85f52a6089ced942700
   languageName: node
   linkType: hard
 
@@ -7963,12 +8179,12 @@ __metadata:
   languageName: node
   linkType: hard
 
-"markdown-to-jsx@npm:^7.3.2":
-  version: 7.3.2
-  resolution: "markdown-to-jsx@npm:7.3.2"
+"markdown-to-jsx@npm:^7.4.1":
+  version: 7.7.0
+  resolution: "markdown-to-jsx@npm:7.7.0"
   peerDependencies:
     react: ">= 0.14.0"
-  checksum: 8885c6343b71570b0a7ec16cd85a49b853a830234790ee7430e2517ea5d8d361ff138bd52147f650790f3e7b3a28a15c755fc16f8856dd01ddf09a6161782e06
+  checksum: 534f4d688378a94a6c8c2ce5e4b22c1551efea974c2bb7d4ea820d8f2b7956e4979a2b886b3d14227d4cd8af09682b9e7f7f9ce34d39703eb1a981e2337e12ce
   languageName: node
   linkType: hard
 
@@ -8358,7 +8574,7 @@ __metadata:
   languageName: node
   linkType: hard
 
-"nanoid@npm:^3.3.6, nanoid@npm:^3.3.7":
+"nanoid@npm:^3.3.7":
   version: 3.3.7
   resolution: "nanoid@npm:3.3.7"
   bin:
@@ -9693,12 +9909,12 @@ __metadata:
   languageName: node
   linkType: hard
 
-"react@npm:^18.2.0":
-  version: 18.2.0
-  resolution: "react@npm:18.2.0"
+"react@npm:>=17.0.0 <19.0.0, react@npm:^18.2.0":
+  version: 18.3.1
+  resolution: "react@npm:18.3.1"
   dependencies:
     loose-envify: ^1.1.0
-  checksum: 88e38092da8839b830cda6feef2e8505dec8ace60579e46aa5490fc3dc9bba0bd50336507dc166f43e3afc1c42939c09fe33b25fae889d6f402721dcd78fca1b
+  checksum: a27bcfa8ff7c15a1e50244ad0d0c1cb2ad4375eeffefd266a64889beea6f6b64c4966c9b37d14ee32d6c9fcd5aa6ba183b6988167ab4d127d13e7cb5b386a376
   languageName: node
   linkType: hard
 
@@ -10157,17 +10373,17 @@ __metadata:
   languageName: node
   linkType: hard
 
-"sanitize-html@npm:~2.7.3":
-  version: 2.7.3
-  resolution: "sanitize-html@npm:2.7.3"
+"sanitize-html@npm:~2.12.1":
+  version: 2.12.1
+  resolution: "sanitize-html@npm:2.12.1"
   dependencies:
     deepmerge: ^4.2.2
     escape-string-regexp: ^4.0.0
-    htmlparser2: ^6.0.0
+    htmlparser2: ^8.0.0
     is-plain-object: ^5.0.0
     parse-srcset: ^1.0.2
     postcss: ^8.3.11
-  checksum: 2399d1fdbbc3a263fb413c1fe1971b3dc2b51abc6cc5cb49490624539d1c57a8fe31e2b21408c118e2a957f4e673e3169b1f9a5807654408f17b130a9d78aed7
+  checksum: fb96ea7170d51b5af2607f5cfd84464c78fc6f47e339407f55783e781c6a0288a8d40bbf97ea6a8758924ba9b2d33dcc4846bb94caacacd90d7f2de10ed8541a
   languageName: node
   linkType: hard
 
@@ -10933,6 +11149,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"tabbable@npm:^5.2.0":
+  version: 5.3.3
+  resolution: "tabbable@npm:5.3.3"
+  checksum: 1aa56e1bb617cc10616c407f4e756f0607f3e2d30f9803664d70b85db037ca27e75918ed1c71443f3dc902e21dc9f991ce4b52d63a538c9b69b3218d3babcd70
+  languageName: node
+  linkType: hard
+
 "table@npm:^6.8.1":
   version: 6.8.1
   resolution: "table@npm:6.8.1"
@@ -11243,6 +11466,13 @@ __metadata:
   languageName: node
   linkType: hard
 
+"tslib@npm:^1.13.0":
+  version: 1.14.1
+  resolution: "tslib@npm:1.14.1"
+  checksum: dbe628ef87f66691d5d2959b3e41b9ca0045c3ee3c7c7b906cc1e328b39f199bb1ad9e671c39025bd56122ac57dfbf7385a94843b1cc07c60a4db74795829acd
+  languageName: node
+  linkType: hard
+
 "tslib@npm:^2.1.0, tslib@npm:^2.3.0, tslib@npm:^2.4.0, tslib@npm:^2.4.1, tslib@npm:^2.6.0, tslib@npm:^2.6.2":
   version: 2.6.2
   resolution: "tslib@npm:2.6.2"

From 4a5cceb412ace260c573e036b42c0484cb108ba3 Mon Sep 17 00:00:00 2001
From: Nicolas Brichet <nicolas.brichet@quantstack.net>
Date: Thu, 21 Nov 2024 15:02:15 +0100
Subject: [PATCH 5/5] Revert useless changes to handle notebook shell

---
 js/jupyterlab-deck/src/manager.ts | 9 +++------
 js/jupyterlab-deck/src/plugin.ts  | 5 +----
 2 files changed, 4 insertions(+), 10 deletions(-)

diff --git a/js/jupyterlab-deck/src/manager.ts b/js/jupyterlab-deck/src/manager.ts
index 566210d..fe922de 100644
--- a/js/jupyterlab-deck/src/manager.ts
+++ b/js/jupyterlab-deck/src/manager.ts
@@ -44,7 +44,6 @@ export class DeckManager implements IDeckManager {
   protected _designTools: DesignTools | null = null;
   protected _settings: Promise<ISettingRegistry.ISettings>;
   protected _labShell?: LabShell | null;
-  protected _notebookShell?: INotebookShell | null;
   protected _dockPanel: DockPanel | null = null;
   protected _shell: JupyterFrontEnd.IShell;
   protected _statusbar: StatusBar | null;
@@ -509,16 +508,15 @@ export class DeckManager implements IDeckManager {
   }
 
   protected get _shellActiveWidget(): Widget | null {
-    const { _labShell, _notebookShell, _dockPanel } = this;
+    const { _labShell, _shell, _dockPanel } = this;
     if (_labShell && _dockPanel) {
       if (_labShell.activeWidget) {
         return _labShell.activeWidget;
       }
       return getSelectedWidget(_dockPanel);
-    } else if (_notebookShell) {
-      return _notebookShell.currentWidget || null;
+    } else {
+      return (_shell as INotebookShell).currentWidget || null;
     }
-    return null;
   }
 
   protected async _onSettingsChanged() {
@@ -603,7 +601,6 @@ export namespace DeckManager {
   export interface IOptions {
     commands: CommandRegistry;
     labShell: ILabShell | null;
-    notebookShell: INotebookShell | null;
     shell: JupyterFrontEnd.IShell;
     translator: TranslationBundle;
     statusbar: StatusBar | null;
diff --git a/js/jupyterlab-deck/src/plugin.ts b/js/jupyterlab-deck/src/plugin.ts
index b65c9bc..7bd63af 100644
--- a/js/jupyterlab-deck/src/plugin.ts
+++ b/js/jupyterlab-deck/src/plugin.ts
@@ -1,5 +1,4 @@
 import { IFontManager } from '@deathbeds/jupyterlab-fonts';
-import { INotebookShell } from '@jupyter-notebook/application';
 import {
   JupyterFrontEnd,
   JupyterFrontEndPlugin,
@@ -33,7 +32,7 @@ import '../style/index.css';
 const plugin: JupyterFrontEndPlugin<IDeckManager> = {
   id: `${NS}:plugin`,
   requires: [ITranslator, ISettingRegistry, IFontManager],
-  optional: [ILabShell, INotebookShell, ILayoutRestorer, ICommandPalette, IStatusBar],
+  optional: [ILabShell, ILayoutRestorer, ICommandPalette, IStatusBar],
   provides: IDeckManager,
   autoStart: true,
   activate: (
@@ -42,7 +41,6 @@ const plugin: JupyterFrontEndPlugin<IDeckManager> = {
     settings: ISettingRegistry,
     fonts: IFontManager,
     labShell?: ILabShell,
-    notebookShell?: INotebookShell,
     restorer?: ILayoutRestorer,
     palette?: ICommandPalette,
     statusbar?: IStatusBar,
@@ -56,7 +54,6 @@ const plugin: JupyterFrontEndPlugin<IDeckManager> = {
       commands,
       shell,
       labShell: labShell || null,
-      notebookShell: notebookShell || null,
       translator: (translator || /* istanbul ignore next */ nullTranslator).load(NS),
       statusbar: theStatusBar,
       fonts,