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clust_stdout.log
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clust_stdout.log
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usearch v8.1.1861_i86linux32, 4.0Gb RAM (12.1Gb total), 4 cores
(C) Copyright 2013-15 Robert C. Edgar, all rights reserved.
http://drive5.com/usearch
License: [email protected]
00:00 38Mb 0.1% 0 clusters, max size 0, avg 0.000:01 45Mb 0.3% 677 clusters, max size 514883, avg 13880.000:02 47Mb 0.7% 1665 clusters, max size 591210, avg 6615.200:03 48Mb 1.3% 2584 clusters, max size 610399, avg 4581.500:04 49Mb 2.1% 3447 clusters, max size 622435, avg 3585.100:05 50Mb 3.1% 4245 clusters, max size 638316, avg 3000.100:06 50Mb 4.2% 5006 clusters, max size 645947, avg 2601.000:07 51Mb 5.3% 5644 clusters, max size 650466, avg 2346.300:08 52Mb 6.7% 6197 clusters, max size 654426, avg 2169.000:09 52Mb 8.2% 6705 clusters, max size 657068, avg 2029.400:10 53Mb 9.7% 7115 clusters, max size 659520, avg 1932.400:11 53Mb 11.5% 7573 clusters, max size 660945, avg 1832.700:12 54Mb 13.4% 7931 clusters, max size 662234, avg 1765.100:13 54Mb 15.5% 8234 clusters, max size 663487, avg 1714.000:14 54Mb 17.9% 8450 clusters, max size 663946, avg 1683.000:15 54Mb 20.2% 8686 clusters, max size 665112, avg 1648.100:16 55Mb 22.9% 8862 clusters, max size 665337, avg 1626.200:17 55Mb 24.8% 9082 clusters, max size 666432, avg 1595.400:18 55Mb 28.0% 9156 clusters, max size 667015, avg 1592.000:19 55Mb 31.2% 9268 clusters, max size 667019, avg 1581.900:20 55Mb 33.0% 9571 clusters, max size 667351, avg 1538.400:21 56Mb 34.8% 9752 clusters, max size 668783, avg 1516.100:22 56Mb 38.0% 9801 clusters, max size 669140, avg 1515.000:23 56Mb 41.4% 9831 clusters, max size 669155, avg 1517.200:24 56Mb 44.9% 9867 clusters, max size 669176, avg 1518.400:25 56Mb 47.2% 10110 clusters, max size 669320, avg 1487.200:26 56Mb 49.1% 10342 clusters, max size 669662, avg 1458.400:27 56Mb 50.9% 10485 clusters, max size 670241, avg 1443.100:28 57Mb 52.8% 10697 clusters, max size 671708, avg 1418.700:29 57Mb 54.7% 10758 clusters, max size 672727, avg 1414.800:30 57Mb 58.0% 10794 clusters, max size 672759, avg 1414.000:31 57Mb 61.1% 10855 clusters, max size 672821, avg 1409.700:32 57Mb 62.9% 10902 clusters, max size 674837, avg 1406.400:33 57Mb 65.6% 11027 clusters, max size 675787, avg 1393.800:34 57Mb 68.7% 11080 clusters, max size 675825, avg 1390.800:35 57Mb 71.9% 11118 clusters, max size 675859, avg 1389.800:36 57Mb 75.1% 11150 clusters, max size 675875, avg 1389.600:37 57Mb 78.3% 11193 clusters, max size 675891, avg 1387.900:38 57Mb 80.8% 11292 clusters, max size 675899, avg 1379.100:39 58Mb 82.7% 11444 clusters, max size 675899, avg 1363.700:40 58Mb 84.5% 11599 clusters, max size 675913, avg 1348.300:41 58Mb 86.6% 11721 clusters, max size 675913, avg 1337.200:42 58Mb 88.5% 11879 clusters, max size 675913, avg 1322.200:43 58Mb 90.2% 11950 clusters, max size 676221, avg 1316.800:44 58Mb 91.9% 11978 clusters, max size 677129, avg 1316.000:45 58Mb 93.6% 12019 clusters, max size 677867, avg 1313.900:46 58Mb 95.2% 12151 clusters, max size 678239, avg 1301.900:47 59Mb 96.9% 12393 clusters, max size 678949, avg 1278.600:48 59Mb 98.6% 12471 clusters, max size 679475, avg 1272.700:48 59Mb 100.0% 12601 clusters, max size 681167, avg 1261.0
00:48 59Mb 0.0% Writing centroids to otus_95_combo.fasta 00:48 59Mb 100.0% Writing centroids to otus_95_combo.fasta
Seqs 748827 (748827 ()
Clusters 12601 (12601 (12601 (126)
Max size 681167 (681167 (681167 (681167 (6)
Avg size 1261.0
Min size 2
Singletons 0, 0.0% of seqs, 0.0% of clusters
Max mem 59Mb
Time 48.0s
Throughput 15.6k seqs/sec.