mkdocs.yml

site_name:        Computational Biology Core - Brown University
site_author:      Ashok Ragavendran
repo_url:         https://github.com/compbiocore/bioflows
site_description: Documentation for running Bioinformatics/Computational workflows with bioflowa
site_url:         https://compbiocore.github.io/
google_analytics: ['UA-115983496-2', 'compbiocore.github.io']

theme:
  name: material
  feature:
    tabs: true
  palette:
    primary: 'blue grey'
    accent: 'indigo'
  logo: assets/cbc-logo.svg

extra_css:
- styles/dark_mode.css
- docs/assets/adm.css
- https://use.fontawesome.com/releases/v5.8.0/css/all.css
markdown_extensions:
- extra
- tables
- admonition
- codehilite
- footnotes
- pymdownx.superfences
- pymdownx.details

nav:
- Home: index.md
- Docs: intro.md
- Specifications: yaml_description.md
- Tutorials:
  - About: tutorials/tutorials.md
  - Setup the bioflows environment: tutorials/Setup_bioflows_env.md
  - RNA-Seq tutorial: tutorials/rna-seq_tutorial.md
  - Qiime2 tutorial: tutorials/qiime2_tutorial.md