diff --git a/.github/workflows/push-tests.yml b/.github/workflows/push-tests.yml
index c29b29fe3d..976738d9cd 100644
--- a/.github/workflows/push-tests.yml
+++ b/.github/workflows/push-tests.yml
@@ -195,7 +195,7 @@ jobs:
           docker buildx build --cache-from=type=registry,ref=${{ secrets.ECR_REPO }}/genepi-backend:branch-trunk -t ${{ secrets.ECR_REPO }}/genepi-backend:latest src/backend
           make local-init LOCALDEV_PROFILE=backend
           make backend-test
-  gisaid-test:
+  workflows-gisaid-pangolin-test:
     runs-on: ubuntu-20.04
     steps:
       - name: Configure AWS prod Credentials
@@ -221,9 +221,12 @@ jobs:
           make gha-setup
           # Build gisaid image
           # docker buildx build --cache-from=type=registry,ref=${{ secrets.ECR_REPO }}/genepi-backend:branch-trunk -t ${{ secrets.ECR_REPO }}/genepi-gisaid:latest -f src/backend/Dockerfile.gisaid src/backend
+          # Build pangolin image
+          # docker buildx build --cache-from=type=registry,ref=${{ secrets.ECR_REPO }}/genepi-backend:branch-trunk -t ${{ secrets.ECR_REPO }}/genepi-pangolin:latest -f src/backend/Dockerfile.pangolin src/backend
           make local-init LOCALDEV_PROFILE=gisaid
           python3 -m pip install miniwdl
           make pipeline-test-gisaid
+          make pipeline-test-pangolin
   build-push-images:
     if: github.ref == 'refs/heads/trunk'
     runs-on: ubuntu-20.04
diff --git a/.happy/terraform/modules/sfn_config/pangolin-ondemand.wdl b/.happy/terraform/modules/sfn_config/pangolin-ondemand.wdl
index faeba854bb..51551e8190 100644
--- a/.happy/terraform/modules/sfn_config/pangolin-ondemand.wdl
+++ b/.happy/terraform/modules/sfn_config/pangolin-ondemand.wdl
@@ -2,13 +2,12 @@ version 1.1
 
 workflow pangolin {
     input {
-        String docker_image_id = "pangolin:latest"
+        String docker_image_id = "genepi-pangolin:latest"
         String aws_region = "us-west-2"
         String genepi_config_secret_name
         String remote_dev_prefix = ""
         Array[String] samples
     }
-
     call pangolin_workflow {
         input:
         docker_image_id = docker_image_id,
@@ -29,6 +28,7 @@ task pangolin_workflow {
     }
 
     command <<<
+    export AWS_REGION="~{aws_region}"
     export GENEPI_CONFIG_SECRET_NAME="~{genepi_config_secret_name}"
     if [ "~{remote_dev_prefix}" != "" ]; then
         export REMOTE_DEV_PREFIX="~{remote_dev_prefix}"
diff --git a/Makefile b/Makefile
index b233b8449f..54e556c946 100644
--- a/Makefile
+++ b/Makefile
@@ -269,6 +269,18 @@ pipeline-test-gisaid:
 	miniwdl run --cfg miniwdl.cfg --env AWS_ACCESS_KEY_ID --env AWS_SECRET_ACCESS_KEY --env BOTO_ENDPOINT_URL --input test_inputs.json --verbose -o output.json ../../../.happy/terraform/modules/sfn_config/gisaid.wdl
 	$(docker_compose) run --no-deps --rm backend make pipeline-test-gisaid
 
+.PHONY: pipeline-test-pangolin
+pipeline-test-pangolin:
+	source .env.ecr; \
+	export DOCKER_REPO; \
+	export BOTO_ENDPOINT_URL=http://localstack.genepinet.localdev:4566; \
+	export AWS_ACCESS_KEY_ID=NONCE; \
+	export AWS_SECRET_ACCESS_KEY=NONCE; \
+	export MINIWDL_CFG=miniwdl.cfg; \
+	cd src/backend/pipeline_tests; \
+	cat test_data/pangolin_pipeline_inputs.json | envsubst > test_inputs.json; \
+	miniwdl run --debug --cfg miniwdl.cfg --env AWS_ACCESS_KEY_ID --env AWS_SECRET_ACCESS_KEY --env BOTO_ENDPOINT_URL --input test_inputs.json --verbose -o output.json ../../../.happy/terraform/modules/sfn_config/pangolin-ondemand.wdl
+	$(docker_compose) run --no-deps --rm backend make pipeline-test-pangolin
 
 ### WDL ###################################################
 .PHONY: wdl-lint
diff --git a/src/backend/pipeline_tests/test_data/pangolin_pipeline_inputs.json b/src/backend/pipeline_tests/test_data/pangolin_pipeline_inputs.json
new file mode 100644
index 0000000000..d00c30c016
--- /dev/null
+++ b/src/backend/pipeline_tests/test_data/pangolin_pipeline_inputs.json
@@ -0,0 +1,6 @@
+{
+"docker_image_id": "${DOCKER_REPO}genepi-pangolin:latest",
+"aws_region": "us-west-2",
+"genepi_config_secret_name": "genepi-config",
+"samples": ["OCPH20", "OCPH21", "OCPH22", "OCPH23", "OCPH24"]
+}
\ No newline at end of file