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Location of gapfill outputs #201

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AzizBenA opened this issue May 21, 2024 · 0 comments
Open

Location of gapfill outputs #201

AzizBenA opened this issue May 21, 2024 · 0 comments

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@AzizBenA
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AzizBenA commented May 21, 2024

Hello ,

I was finally able to run the gapfill method in carveme but im curious to know where are the output files located. I already have the output model because i specified the location in the command line but for the annotation tsv file i have no clue .

this is the command i used :
gapfill GEM/models/curated_gramneg_updated_Biomass_equation.sbml -m SF -o GEM/models/gapfilled_BE.xml

Thank you for your help in advance .

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