From e7f7c4f5c9a075458059a996dcfa30f3fa44c46b Mon Sep 17 00:00:00 2001 From: Andres Cumsille <38113501+AndresICM@users.noreply.github.com> Date: Tue, 20 Aug 2024 19:49:12 +0100 Subject: [PATCH] Update 09-OtherResources.md --- _episodes/09-OtherResources.md | 6 ++++++ 1 file changed, 6 insertions(+) diff --git a/_episodes/09-OtherResources.md b/_episodes/09-OtherResources.md index 8bcef9c..58b1a0c 100644 --- a/_episodes/09-OtherResources.md +++ b/_episodes/09-OtherResources.md @@ -31,11 +31,17 @@ Finally, to prioritize genomes or species, [autoMLST](https://automlst.ziemertla [Novelty Index](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9973853/) ### Visualize annotated genomes +[GenoVi](https://github.com/robotoD/GenoVi) [CGView](https://github.com/paulstothard/cgview) ### Specialized data bases - BGCs in human Microbiome [Humi](https://ccb-web.cs.uni-saarland.de/abc_humi/) +### Genomic data databases +- [NCBI Large dataset tool](https://www.ncbi.nlm.nih.gov/datasets/docs/v2/how-tos/genomes/large-download/) +- [NPDC Natural Product Discovery Center](https://npdc.rc.ufl.edu/home) +- [AllTheBacteria dataset](https://www.biorxiv.org/content/10.1101/2024.03.08.584059v1) + ### MAssive studies - [Big FAM](https://pubmed.ncbi.nlm.nih.gov/33010170/) - [Earth Microbiome Project](https://www.nature.com/articles/s41587-020-0718-6)