pyproject.toml

[project]
name = "polars-bio-bench"
version = "0.1.0"
description = ""
authors = [
    {name = "Marek Wieiwórka",email = "marek.wiewiorka@gmail.com"}
]
readme = "README.md"
requires-python = ">=3.12,<3.14.0"
dependencies = [
]


[build-system]
requires = ["poetry-core>=2.0.0,<3.0.0"]
build-backend = "poetry.core.masonry.api"

[tool.poetry.dev-dependencies]
emoji = "^2.14.0"
pre-commit = "^4.0.1"
tqdm = "^4.67.1"
gdown = "^5.2.0"
pyyaml = "^6.0.2"
jinja2 = "^3.1.5"
poetry-plugin-shell = "^1.0.0"
polars-bio = "^0.5.3"
setuptools = "^75.8.0"
rich = "^13.9.4"
bioframe = "^0.7.2"
pyranges = {git = "https://github.com/pyranges/pyranges.git", rev = "4f0a153336e7153cdfea15b141ce4ea35a24e233" }
GenomicRanges = "^0.5.0"
pyranges1 = { git = "https://github.com/mwiewior/pyranges1.git", rev = "949d7c15c1c2e217f4404415f79b386f326b6f8d"}
pybedtools = "^0.10.0"
pygenomics =  { git = "https://gitlab.com/gtamazian/pygenomics.git", rev = "0.1.1"}