From 2ac8ceb73e03ff977c001175177d1874880229e5 Mon Sep 17 00:00:00 2001 From: abmiguez Date: Fri, 28 Aug 2020 16:10:20 +0200 Subject: [PATCH] Fixes minor problem with the new PhyloPhlAn version --- metaphlan/utils/external_exec.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/metaphlan/utils/external_exec.py b/metaphlan/utils/external_exec.py index 9e64690..d8bd171 100755 --- a/metaphlan/utils/external_exec.py +++ b/metaphlan/utils/external_exec.py @@ -98,7 +98,7 @@ def create_phylophlan_db(output_dir, clade): "command_line" : "#program_name# #input# #params#" } execute(compose_command(params, input_file=markers)) - os.rename(output_dir+clade+".fna", markers+"/"+clade+".fna") + #os.rename(output_dir+clade+".fna", markers+"/"+clade+".fna") """