From e900e49f1f84b9516ae4ca40d309e0661a7379c2 Mon Sep 17 00:00:00 2001 From: Yasset Perez-Riverol Date: Wed, 1 Jan 2025 11:25:58 +0000 Subject: [PATCH 1/2] PXD030406.sdrf.tsv updated --- projects/cell-lines-proteomes/README.md | 1 + 1 file changed, 1 insertion(+) diff --git a/projects/cell-lines-proteomes/README.md b/projects/cell-lines-proteomes/README.md index 045f80e0..47bd066a 100644 --- a/projects/cell-lines-proteomes/README.md +++ b/projects/cell-lines-proteomes/README.md @@ -17,3 +17,4 @@ Rapid and Deep Proteomes by Faster Sequencing on a Benchtop Quadrupole Ultra-Hig - PXD039414: [Robust and High-Throughput Analytical Flow Proteomics Analysis of Cynomolgus Monkey and Human Matrices with Zeno SWATH Data Independent Acquisition](https://www.ebi.ac.uk/pride/archive/projects/PXD039414) - PXD010150: [Nanowell-Mediated Two-Dimensional Liquid Chromatography Proteome Profiling of Mammalian Cells](https://www.ebi.ac.uk/pride/archive/projects/PXD010150) - PXD005481: [High-flow LC-MS/MS analyses - Conventional-Flow Liquid Chromatography-Mass Spectrometry for Exploratory Bottom-Up Proteomic Analyses](https://www.ebi.ac.uk/pride/archive/projects/PXD005481) +- PXD030406: [Comparative analysis of MS sample preparation methods](https://www.ebi.ac.uk/pride/archive/projects/PXD030406) From 64323335fc4f4ac0247e4391e2c5911146e919bf Mon Sep 17 00:00:00 2001 From: Yasset Perez-Riverol Date: Wed, 1 Jan 2025 13:40:39 +0000 Subject: [PATCH 2/2] PXD030406.sdrf.tsv updated --- .../PMID22068331/PMID22068331-LysC.sdrf.tsv | 75 +++++++++++++++++++ ...sdrf.tsv => PMID22068331-Trypsin.sdrf.tsv} | 0 2 files changed, 75 insertions(+) create mode 100644 projects/cell-lines-proteomes/PMID22068331/PMID22068331-LysC.sdrf.tsv rename projects/cell-lines-proteomes/PMID22068331/{PMID22068331.sdrf.tsv => PMID22068331-Trypsin.sdrf.tsv} (100%) diff --git a/projects/cell-lines-proteomes/PMID22068331/PMID22068331-LysC.sdrf.tsv b/projects/cell-lines-proteomes/PMID22068331/PMID22068331-LysC.sdrf.tsv new file mode 100644 index 00000000..881bad00 --- /dev/null +++ b/projects/cell-lines-proteomes/PMID22068331/PMID22068331-LysC.sdrf.tsv @@ -0,0 +1,75 @@ +source name characteristics[organism] characteristics[organism part] characteristics[sampling site] characteristics[cell line] characteristics[cellosaurus] characteristics[ancestry category] characteristics[age] characteristics[sex] characteristics[disease] characteristics[cell type] characteristics[biological replicate] characteristics[developmental stage] characteristics[individual] Material Type assay name comment[file uri] comment[Fractionation method] comment[cleavage agent details] comment[instrument] comment[modification parameters] comment[modification parameters] comment[modification parameters] comment[modification parameters] comment[label] comment[fragment mass tolerance] comment[precursor mass tolerance] comment[technical replicate] comment[fraction identifier] comment[data file] factor value[cell line] +PMID22068331-Sample-11 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 11 adult not available cell line run 1 https://www.ebi.ac.uk/pride/archive/20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECA_SAXpH_03.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 1 20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECA_SAXpH_03.raw HeLa +PMID22068331-Sample-11 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 11 adult not available cell line run 2 https://www.ebi.ac.uk/pride/archive/20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECA_SAXpH_04.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 2 20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECA_SAXpH_04.raw HeLa +PMID22068331-Sample-11 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 11 adult not available cell line run 3 https://www.ebi.ac.uk/pride/archive/20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECA_SAXpH_05.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 3 20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECA_SAXpH_05.raw HeLa +PMID22068331-Sample-11 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 11 adult not available cell line run 4 https://www.ebi.ac.uk/pride/archive/20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECA_SAXpH_06.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 4 20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECA_SAXpH_06.raw HeLa +PMID22068331-Sample-11 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 11 adult not available cell line run 5 https://www.ebi.ac.uk/pride/archive/20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECA_SAXpH_08.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 5 20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECA_SAXpH_08.raw HeLa +PMID22068331-Sample-11 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 11 adult not available cell line run 6 https://www.ebi.ac.uk/pride/archive/20090806_Velos1_NaNa_SA_10k_Hela_LysC_SECA_SAXpH_11.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 6 20090806_Velos1_NaNa_SA_10k_Hela_LysC_SECA_SAXpH_11.raw HeLa +PMID22068331-Sample-12 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 12 adult not available cell line run 7 https://www.ebi.ac.uk/pride/archive/20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECB_SAXpH_03.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 1 20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECB_SAXpH_03.raw HeLa +PMID22068331-Sample-12 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 12 adult not available cell line run 8 https://www.ebi.ac.uk/pride/archive/20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECB_SAXpH_04_090918110947.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 2 20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECB_SAXpH_04_090918110947.raw HeLa +PMID22068331-Sample-12 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 12 adult not available cell line run 9 https://www.ebi.ac.uk/pride/archive/20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECB_SAXpH_05.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 3 20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECB_SAXpH_05.raw HeLa +PMID22068331-Sample-12 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 12 adult not available cell line run 10 https://www.ebi.ac.uk/pride/archive/20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECB_SAXpH_06.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 4 20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECB_SAXpH_06.raw HeLa +PMID22068331-Sample-12 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 12 adult not available cell line run 11 https://www.ebi.ac.uk/pride/archive/20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECB_SAXpH_08.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 5 20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECB_SAXpH_08.raw HeLa +PMID22068331-Sample-12 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 12 adult not available cell line run 12 https://www.ebi.ac.uk/pride/archive/20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECB_SAXpH_11.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 6 20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECB_SAXpH_11.raw HeLa +PMID22068331-Sample-13 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 13 adult not available cell line run 13 https://www.ebi.ac.uk/pride/archive/20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECC_SAXpH_03.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 1 20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECC_SAXpH_03.raw HeLa +PMID22068331-Sample-13 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 13 adult not available cell line run 14 https://www.ebi.ac.uk/pride/archive/20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECC_SAXpH_04.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 2 20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECC_SAXpH_04.raw HeLa +PMID22068331-Sample-13 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 13 adult not available cell line run 15 https://www.ebi.ac.uk/pride/archive/20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECC_SAXpH_05.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 3 20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECC_SAXpH_05.raw HeLa +PMID22068331-Sample-13 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 13 adult not available cell line run 16 https://www.ebi.ac.uk/pride/archive/20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECC_SAXpH_06.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 4 20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECC_SAXpH_06.raw HeLa +PMID22068331-Sample-13 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 13 adult not available cell line run 17 https://www.ebi.ac.uk/pride/archive/20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECC_SAXpH_08.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 5 20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECC_SAXpH_08.raw HeLa +PMID22068331-Sample-13 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 13 adult not available cell line run 18 https://www.ebi.ac.uk/pride/archive/20090806_Velos1_NaNa_SA_10k_Hela_LysC_SECC_SAXpH_11.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 6 20090806_Velos1_NaNa_SA_10k_Hela_LysC_SECC_SAXpH_11.raw HeLa +PMID22068331-Sample-14 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 14 adult not available cell line run 19 https://www.ebi.ac.uk/pride/archive/20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECD_SAXpH_03.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 1 20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECD_SAXpH_03.raw HeLa +PMID22068331-Sample-14 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 14 adult not available cell line run 20 https://www.ebi.ac.uk/pride/archive/20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECD_SAXpH_04.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 2 20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECD_SAXpH_04.raw HeLa +PMID22068331-Sample-14 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 14 adult not available cell line run 21 https://www.ebi.ac.uk/pride/archive/20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECD_SAXpH_05.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 3 20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECD_SAXpH_05.raw HeLa +PMID22068331-Sample-14 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 14 adult not available cell line run 22 https://www.ebi.ac.uk/pride/archive/20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECD_SAXpH_06.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 4 20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECD_SAXpH_06.raw HeLa +PMID22068331-Sample-14 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 14 adult not available cell line run 23 https://www.ebi.ac.uk/pride/archive/20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECD_SAXpH_08.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 5 20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECD_SAXpH_08.raw HeLa +PMID22068331-Sample-14 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 14 adult not available cell line run 24 https://www.ebi.ac.uk/pride/archive/20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECD_SAXpH_11.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 6 20090805_Velos1_NaNa_SA_10k_Hela_LysC_SECD_SAXpH_11.raw HeLa +PMID22068331-Sample-15 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 15 adult not available cell line run 25 https://www.ebi.ac.uk/pride/archive/20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecA_pH03.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 1 20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecA_pH03.raw HeLa +PMID22068331-Sample-15 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 15 adult not available cell line run 26 https://www.ebi.ac.uk/pride/archive/20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecA_pH04.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 2 20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecA_pH04.raw HeLa +PMID22068331-Sample-15 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 15 adult not available cell line run 27 https://www.ebi.ac.uk/pride/archive/20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecA_pH05.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 3 20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecA_pH05.raw HeLa +PMID22068331-Sample-15 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 15 adult not available cell line run 28 https://www.ebi.ac.uk/pride/archive/20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecA_pH06.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 4 20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecA_pH06.raw HeLa +PMID22068331-Sample-15 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 15 adult not available cell line run 29 https://www.ebi.ac.uk/pride/archive/20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecA_pH08.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 5 20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecA_pH08.raw HeLa +PMID22068331-Sample-15 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 15 adult not available cell line run 30 https://www.ebi.ac.uk/pride/archive/20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecA_pH11_091128150941.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 6 20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecA_pH11_091128150941.raw HeLa +PMID22068331-Sample-15 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 15 adult not available cell line run 31 https://www.ebi.ac.uk/pride/archive/20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecA_pH11.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 7 20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecA_pH11.raw HeLa +PMID22068331-Sample-16 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 16 adult not available cell line run 32 https://www.ebi.ac.uk/pride/archive/20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecB_pH03.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 1 20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecB_pH03.raw HeLa +PMID22068331-Sample-16 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 16 adult not available cell line run 33 https://www.ebi.ac.uk/pride/archive/20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecB_pH04.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 2 20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecB_pH04.raw HeLa +PMID22068331-Sample-16 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 16 adult not available cell line run 34 https://www.ebi.ac.uk/pride/archive/20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecB_pH05.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 3 20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecB_pH05.raw HeLa +PMID22068331-Sample-16 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 16 adult not available cell line run 35 https://www.ebi.ac.uk/pride/archive/20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecB_pH06.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 4 20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecB_pH06.raw HeLa +PMID22068331-Sample-16 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 16 adult not available cell line run 36 https://www.ebi.ac.uk/pride/archive/20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecB_pH08.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 5 20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecB_pH08.raw HeLa +PMID22068331-Sample-16 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 16 adult not available cell line run 37 https://www.ebi.ac.uk/pride/archive/20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecB_pH11_091130221633.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 6 20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecB_pH11_091130221633.raw HeLa +PMID22068331-Sample-17 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 17 adult not available cell line run 38 https://www.ebi.ac.uk/pride/archive/20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecC_pH03.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 1 20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecC_pH03.raw HeLa +PMID22068331-Sample-17 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 17 adult not available cell line run 39 https://www.ebi.ac.uk/pride/archive/20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecC_pH04.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 2 20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecC_pH04.raw HeLa +PMID22068331-Sample-17 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 17 adult not available cell line run 40 https://www.ebi.ac.uk/pride/archive/20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecC_pH05.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 3 20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecC_pH05.raw HeLa +PMID22068331-Sample-17 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 17 adult not available cell line run 41 https://www.ebi.ac.uk/pride/archive/20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecC_pH06.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 4 20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecC_pH06.raw HeLa +PMID22068331-Sample-17 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 17 adult not available cell line run 42 https://www.ebi.ac.uk/pride/archive/20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecC_pH08.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 5 20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecC_pH08.raw HeLa +PMID22068331-Sample-17 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 17 adult not available cell line run 43 https://www.ebi.ac.uk/pride/archive/20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecC_pH11.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 6 20091127_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecC_pH11.raw HeLa +PMID22068331-Sample-18 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 18 adult not available cell line run 44 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecD_pH03.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 1 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecD_pH03.raw HeLa +PMID22068331-Sample-18 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 18 adult not available cell line run 45 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecD_pH04.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 2 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecD_pH04.raw HeLa +PMID22068331-Sample-18 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 18 adult not available cell line run 46 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecD_pH05.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 3 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecD_pH05.raw HeLa +PMID22068331-Sample-18 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 18 adult not available cell line run 47 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecD_pH06.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 4 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecD_pH06.raw HeLa +PMID22068331-Sample-18 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 18 adult not available cell line run 48 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecD_pH08.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 5 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecD_pH08.raw HeLa +PMID22068331-Sample-18 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 18 adult not available cell line run 49 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecD_pH11.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 6 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecD_pH11.raw HeLa +PMID22068331-Sample-19 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 19 adult not available cell line run 50 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecE_pH03.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 1 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecE_pH03.raw HeLa +PMID22068331-Sample-19 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 19 adult not available cell line run 51 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecE_pH04.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 2 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecE_pH04.raw HeLa +PMID22068331-Sample-19 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 19 adult not available cell line run 52 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecE_pH05.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 3 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecE_pH05.raw HeLa +PMID22068331-Sample-19 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 19 adult not available cell line run 53 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecE_pH06.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 4 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecE_pH06.raw HeLa +PMID22068331-Sample-19 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 19 adult not available cell line run 54 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecE_pH08.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 5 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecE_pH08.raw HeLa +PMID22068331-Sample-19 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 19 adult not available cell line run 55 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecE_pH11.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 6 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecE_pH11.raw HeLa +PMID22068331-Sample-20 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 20 adult not available cell line run 56 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecF_pH03.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 1 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecF_pH03.raw HeLa +PMID22068331-Sample-20 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 20 adult not available cell line run 57 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecF_pH04.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 2 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecF_pH04.raw HeLa +PMID22068331-Sample-20 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 20 adult not available cell line run 58 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecF_pH05.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 3 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecF_pH05.raw HeLa +PMID22068331-Sample-20 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 20 adult not available cell line run 59 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecF_pH06.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 4 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecF_pH06.raw HeLa +PMID22068331-Sample-20 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 20 adult not available cell line run 60 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecF_pH08.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 5 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecF_pH08.raw HeLa +PMID22068331-Sample-20 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 20 adult not available cell line run 61 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecF_pH11.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 6 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecF_pH11.raw HeLa +PMID22068331-Sample-20 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 20 adult not available cell line run 62 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecF_pH11_run2.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 7 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecF_pH11_run2.raw HeLa +PMID22068331-Sample-21 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 21 adult not available cell line run 63 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecG_pH03.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 1 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecG_pH03.raw HeLa +PMID22068331-Sample-21 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 21 adult not available cell line run 64 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecG_pH04.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 2 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecG_pH04.raw HeLa +PMID22068331-Sample-21 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 21 adult not available cell line run 65 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecG_pH05.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 3 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecG_pH05.raw HeLa +PMID22068331-Sample-21 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 21 adult not available cell line run 66 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecG_pH06.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 4 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecG_pH06.raw HeLa +PMID22068331-Sample-21 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 21 adult not available cell line run 67 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecG_pH08.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 5 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecG_pH08.raw HeLa +PMID22068331-Sample-21 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 21 adult not available cell line run 68 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecG_pH11.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 6 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecG_pH11.raw HeLa +PMID22068331-Sample-22 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 22 adult not available cell line run 69 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecH_pH03.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 1 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecH_pH03.raw HeLa +PMID22068331-Sample-22 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 22 adult not available cell line run 70 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecH_pH04.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 2 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecH_pH04.raw HeLa +PMID22068331-Sample-22 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 22 adult not available cell line run 71 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecH_pH05.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 3 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecH_pH05.raw +PMID22068331-Sample-22 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 22 adult not available cell line run 72 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecH_pH06.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 4 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecH_pH06.raw +PMID22068331-Sample-22 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 22 adult not available cell line run 73 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecH_pH08.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 5 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecH_pH08.raw +PMID22068331-Sample-22 Homo sapiens cervix Uterus HeLa CVCL_0030 African American 30Y6M Female Human papillomavirus-related cervical adenocarcinoma epithelial 22 adult not available cell line run 74 https://www.ebi.ac.uk/pride/archive/20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecH_pH11.raw NT=High-performance liquid chromatography;AC=PRIDE:0000565 NT=Lys-C/P;AC=MS:1001310 NT=LTQ Orbitrap Velos;AC=MS:1001742 NT=Carbamidomethyl;TA=C;AC=UNIMOD:4;MT=fixed NT=Oxidation;MT=Variable;TA=M;AC=UNIMOD:35 "NT=Deamidated;AC=UNIMOD:7;TA=N,Q;MT=Variable" NT=Acetyl;AC=UNIMOD:1;TA=N-term;MT=Variable AC=MS:1002038;NT=label free sample 30 ppm 30 ppm 1 6 20091204_Velos1_NaNa_SA_10k_run2_Hela_LysC_SecH_pH11.raw \ No newline at end of file diff --git a/projects/cell-lines-proteomes/PMID22068331/PMID22068331.sdrf.tsv b/projects/cell-lines-proteomes/PMID22068331/PMID22068331-Trypsin.sdrf.tsv similarity index 100% rename from projects/cell-lines-proteomes/PMID22068331/PMID22068331.sdrf.tsv rename to projects/cell-lines-proteomes/PMID22068331/PMID22068331-Trypsin.sdrf.tsv