NAMESPACE

# Generated by roxygen2: do not edit by hand

export(annotateAnyIDs)
export(annotateEnsemblGeneIDs)
export(annotateEnsemblGeneIDsWithEnsembl)
export(annotateEnsemblGeneIDsWithHumanOrtholog)
export(annotateEnsemblGeneIDsWithNCBI)
export(annotateEnsemblGeneIDsWithoutHumanOrtholog)
export(annotateGeneIDs)
export(annotateGeneIDsWithHumanOrtholog)
export(annotateGeneIDsWithoutHumanOrtholog)
export(annotateGeneSymbols)
export(annotateHumanOrthologsWithNCBI)
export(annotateNonHumanGenesHumanOrthologsWithNCBI)
export(annotateProteinGroups)
export(annotateTaxID)
export(appendHumanOrthologsWithNCBI)
export(bioc2gti)
export(connectMongoDB)
export(formatIn)
export(gti2bioc)
export(guessAndAnnotate)
export(guessFeatureType)
export(humanOrthologsByTaxID)
export(isValidFeatureID)
export(likeEnsembl)
export(likeEnsemblGeneID)
export(likeGeneID)
export(likeGeneSymbol)
export(likeHumanGeneSymbol)
export(likeRefSeq)
export(likeUniProt)
export(loadMongodbSecrets)
export(locateSecretsFile)
export(majorityLikeHumanGeneSymbol)
export(removeEnsemblVersion)
export(returnFieldsJson)
export(ribiosAnnotationSecretEnvVar)
export(ribiosAnnotationSecretFile)
export(sortAnnotationByQuery)
export(uniprotByTaxID)
export(validFeatureIDs)
importFrom(dplyr,any_of)
importFrom(dplyr,arrange)
importFrom(dplyr,group_by)
importFrom(dplyr,group_modify)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,rename)
importFrom(dplyr,right_join)
importFrom(dplyr,select)
importFrom(magrittr,"%>%")
importFrom(magrittr,'%>%')
importFrom(mongolite,mongo)
importFrom(ribiosUtils,haltifnot)
importFrom(ribiosUtils,matchColumn)
importFrom(ribiosUtils,matchColumnIndex)
importFrom(ribiosUtils,putColsFirst)
importFrom(rjson,fromJSON)
importFrom(rjson,toJSON)
importFrom(tidyr,unnest)
importFrom(utils,data)
importFrom(utils,globalVariables)