diff --git a/run_swing.py b/run_swing.py index cc950f1..0b30f2e 100644 --- a/run_swing.py +++ b/run_swing.py @@ -1,6 +1,5 @@ import pandas as pd from Swing import Swing - # Load data gene_start_column = 1 time_label = "Time" @@ -29,8 +28,6 @@ sg.rank_edges(permutation_n=10) sg.compile_roller_edges(self_edges=False) - -# Load the reference standard for scoring in silico predictions sg.make_static_edge_dict(self_edges=False, lag_method='mean_mean') ranked_edges = sg.make_sort_df(sg.edge_dict)