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Add example using non-georeference imagery #43

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lewfish opened this issue Mar 11, 2019 · 4 comments
Open

Add example using non-georeference imagery #43

lewfish opened this issue Mar 11, 2019 · 4 comments

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@lewfish
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lewfish commented Mar 11, 2019

Medical would be good? Single band would also be good to test. Something with a permissive license.

@simonkassel
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simonkassel commented May 8, 2019

is this a high priority? I could potentially take it on. Do we have any ideas about what we would want to use?

Here are a few options I found from kaggle:

Pneumonia detection challenge

  • object detection, locate lung opacities in chest radiographs
  • labels come in a csv of long/lat bounding boxes
  • images are in DICOM format which seems common for medical stuff

CT medical images

  • just a dataset, not a competition
  • seems like it's just a dataset of images with age and some boolean field called contrast (not sure exactly what it signifies)
  • we could potentially classify images by either of these categories (although age is continuous)
  • DIRCOM and TIFF format
  • looks like these images are only 512x512

NIH chest x-rays

  • just dataset, not a competition
  • 112,120 total images with size 1024 x 1024 (not sure if this is big enough to make it useful to use RV)
  • seems like this would be classifying images into 15 categories (14 diseases + no disease category)
  • looks like there are a limited number of labeled bounding boxes for specific locations of disease within imagery

also here is a curated list of machine learning medical imagery datasets. I haven't looked through them yet but it looks like a lot require registration

@simonkassel
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looks like the pneumonia detection images are only 1024x1024 as well

@lewfish
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lewfish commented May 8, 2019

Rob is working on https://camelyon16.grand-challenge.org/ so I would hold off on this.

@simonkassel
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ok, right, I forgot about that

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