From b7d79bf7088c704ec14365486d673ebcc65328f0 Mon Sep 17 00:00:00 2001 From: Friederike Hanssen Date: Tue, 30 Jul 2024 09:35:02 +0200 Subject: [PATCH] Update subworkflows/local/bam_variant_calling_cnvkit/main.nf --- subworkflows/local/bam_variant_calling_cnvkit/main.nf | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/subworkflows/local/bam_variant_calling_cnvkit/main.nf b/subworkflows/local/bam_variant_calling_cnvkit/main.nf index 58051d5fa6..800d4b60d6 100644 --- a/subworkflows/local/bam_variant_calling_cnvkit/main.nf +++ b/subworkflows/local/bam_variant_calling_cnvkit/main.nf @@ -37,7 +37,8 @@ workflow BAM_VARIANT_CALLING_CNVKIT { versions = versions.mix(CNVKIT_BATCH.out.versions) versions = versions.mix(CNVKIT_GENEMETRICS.out.versions) - + versions = versions.mix( CNVKIT_CALL.out.versions) + versions = versions.mix( CNVKIT_EXPORT.out.versions) emit: cnv_calls_raw = CNVKIT_CALL.out.cns // channel: [ meta, cns ] cnv_calls_export = CNVKIT_EXPORT.out.output // channel: [ meta, export_format ]