test_ardc_nrt.yml

name: ardc_nrt module

on:
  push:
    branches: [ master ]
  pull_request:
    branches: [ master ]

jobs:
  build-linux:
    runs-on: ubuntu-latest
    defaults:
      run:
        shell: bash -el {0}

    steps:
      - uses: actions/checkout@v4
        with:
          submodules: 'true'

      # ARDC NRT module unittests
      - name: Set up Miniconda
        uses: conda-incubator/setup-miniconda@v3
        with:
          activate-environment: ardc_nrt
          environment-file: AODN/AODN-WAVE-NRT/ARDC_API_NRT/environment.yml
          auto-activate-base: false  # Prevent activating base env

      - name: Install dependencies
        shell: bash -el {0}
        run: |
          conda install --yes mamba
          mamba env create --name ardc_nrt --file environment.yml || true  # Create only if not exists
          conda activate ardc_nrt
          mamba env update --name ardc_nrt --file AODN/AODN-WAVE-NRT/ARDC_API_NRT/environment.yml

      - name: Activate Conda environment
        shell: bash -el {0}
        run: |
          conda init
          conda activate ardc_nrt

      - name: Run pytest and coverage
        run: |
          pytest AODN/AODN-WAVE-NRT/ARDC_API_NRT