forked from equinor/xtgeo
-
Notifications
You must be signed in to change notification settings - Fork 0
202 lines (172 loc) · 5.28 KB
/
test.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
name: Tests
on:
push:
branches: [main, "version-*"]
pull_request:
branches: [main, "version-*"]
release:
types:
- published
schedule:
# Run nightly to check that tests are working with latest dependencies
- cron: "0 0 * * *"
jobs:
test:
runs-on: ${{ matrix.os }}
timeout-minutes: 15
strategy:
matrix:
python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"]
os: [ubuntu-latest]
include:
- os: macos-latest
python-version: "3.10"
- os: macos-latest
python-version: 3.12
- os: windows-latest
python-version: 3.8
- os: windows-latest
python-version: 3.12
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Fix macos HDF5 library for pytables install (works for python >= 3.10)
if: ${{ matrix.os == 'macos-latest' }}
run: |
brew update
brew install hdf5
- name: Setup xtgeo
env:
# relevant for macos builds only
HDF5_DIR: /opt/homebrew
uses: "./.github/actions/setup_xtgeo"
with:
python-version: ${{ matrix.python-version }}
- name: Setup testdata
uses: "./.github/actions/setup_testdata"
- name: Run tests
run: pytest -n 4 tests --disable-warnings --generate-plots
hypothesis:
runs-on: ubuntu-latest
timeout-minutes: 15
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Setup xtgeo
uses: "./.github/actions/setup_xtgeo"
with:
python-version: 3.9
- name: Setup testdata
uses: "./.github/actions/setup_testdata"
- name: Run just hypothesis tests with more examples
run: pytest -n 4 tests --disable-warnings -m hypothesis --generate-plots
rms:
name: ${{ matrix.config.name }}
runs-on: ${{ matrix.config.os }}
timeout-minutes: 15
strategy:
fail-fast: false
matrix:
config:
- {
name: "RMS 12.1.4, 13.0.3, 13.1.0, 14.1.1",
os: ubuntu-20.04,
python: 3.8.6,
pip: 23.2.1,
wheel: 0.37.1,
setuptools: 63.4.3,
matplotlib: 3.3.2,
numpy: 1.19.2,
pandas: 1.1.3,
scipy: 1.5.3,
}
- {
name: "RMS 14.2",
os: ubuntu-latest,
python: 3.11.3,
pip: 23.3.1,
wheel: 0.37.1,
setuptools: 63.4.3,
matplotlib: 3.7.1,
numpy: 1.24.3,
pandas: 2.0.2,
scipy: 1.10.1,
}
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Setup testdata
uses: "./.github/actions/setup_testdata"
- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.config.python }}
- name: Build and install xtgeo
run: |
pip install pip==${{ matrix.config.pip }}
pip install \
wheel==${{ matrix.config.wheel }} \
setuptools==${{ matrix.config.setuptools }} \
matplotlib==${{ matrix.config.matplotlib }} \
numpy==${{ matrix.config.numpy }} \
pandas==${{ matrix.config.pandas }} \
scipy==${{ matrix.config.scipy }}
pip install ".[dev]"
- name: List dependencies
run: pip freeze
- name: Run tests
run: pytest -n 4 tests --disable-warnings --generate-plots
big:
runs-on: ubuntu-latest
timeout-minutes: 15
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Setup xtgeo
uses: "./.github/actions/setup_xtgeo"
with:
python-version: 3.9
- name: Setup testdata
uses: "./.github/actions/setup_testdata"
- name: Run just tests marked big
run: XTG_BIGTEST=1 pytest -n 4 tests --disable-warnings -m bigtest --generate-plots
codecov:
runs-on: ubuntu-latest
timeout-minutes: 15
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Setup xtgeo
uses: "./.github/actions/setup_xtgeo"
with:
python-version: 3.9
- name: Setup testdata
uses: "./.github/actions/setup_testdata"
- name: Generate coverage report
run: pytest -n 4 tests --doctest-modules --generate-plots --disable-warnings --cov=xtgeo --cov-report=xml:xtgeocoverage.xml;
- name: Upload coverage to Codecov
uses: codecov/codecov-action@v4
with:
files: xtgeocoverage.xml
opm-integration:
runs-on: ubuntu-latest
timeout-minutes: 15
steps:
- uses: actions/checkout@v4
- uses: "./.github/actions/setup_xtgeo"
with:
python-version: 3.9
- name: Setup testdata
uses: "./.github/actions/setup_testdata"
- name: Set up OPM
run: |
sudo apt install software-properties-common &&
sudo apt-add-repository ppa:opm/ppa &&
sudo apt install mpi-default-bin libopm-simulators-bin
- name: Integration test
run: HAS_OPM=1 python -m pytest -m requires_opm --disable-warnings