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csmo.ttl
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@prefix nfo: <http://www.semanticdesktop.org/ontologies/2007/03/22/nfo#> .
@prefix terms: <http://purl.org/dc/terms/> .
@prefix org: <http://www.w3.org/ns/org#> .
@prefix gn: <http://www.geonames.org/ontology#> .
@prefix foaf: <http://xmlns.com/foaf/0.1/> .
@prefix xml: <http://www.w3.org/XML/1998/namespace> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix bibo: <http://purl.org/ontology/bibo/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix csmo: <https://www.escidoc.org/ontologies/csmo/> .
@prefix : <https://www.escidoc.org/ontologies/csmo/> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix skos: <http://www.w3.org/2004/02/skos/core#> .
@base <https://www.escidoc.org/ontologies/csmo/> .
<https://www.escidoc.org/ontologies/csmo/> rdf:type owl:Ontology ;
terms:creator "Armand Brahaj" ;
owl:versionInfo "0.2" ;
terms:description "An ontology for the representation of scientific study metadata based on the Core Scientific Metadata Model."@en ;
terms:publisher "http://www.escidoc.org"@en ;
owl:versionIRI <https://www.escidoc.org/ontologies/csmo/> .
#################################################################
#
# Annotation properties
#
#################################################################
terms:creator rdf:type owl:AnnotationProperty .
terms:description rdf:type owl:AnnotationProperty .
terms:hasVersion rdf:type owl:AnnotationProperty .
terms:publisher rdf:type owl:AnnotationProperty .
terms:modified rdf:type owl:AnnotationProperty .
skos:note rdf:type owl:AnnotationProperty .
terms:issued rdf:type owl:AnnotationProperty .
terms:title rdf:type owl:AnnotationProperty ;
rdfs:label "title"@en ;
rdfs:comment "A name given to the resource."@en ;
rdfs:isDefinedBy terms: .
#################################################################
#
# Datatypes
#
#################################################################
#################################################################
#
# Object Properties
#
#################################################################
### http://www.w3.org/ns/org#'has_member'
org:'has_member' rdf:type owl:ObjectProperty ;
rdfs:domain org:Organisation ;
rdfs:range foaf:Person .
### http://www.w3.org/ns/org#'member_of'
org:'member_of' rdf:type owl:ObjectProperty ;
owl:inverseOf org:'has_member' ;
rdfs:range org:Organisation ;
rdfs:domain foaf:Agent .
### http://www.w3.org/ns/org#hasSite
org:hasSite rdf:type owl:ObjectProperty ;
rdfs:range org:Site ;
rdfs:domain csmo:#Institution ,
csmo:#Instrument .
### https://www.escidoc.org/ontologies/csmo/#hasAccess
csmo:#hasAccess rdf:type owl:ObjectProperty ;
rdfs:label "hasAccess" ;
rdfs:range nfo:Folder ;
rdfs:domain org:Role ;
rdfs:range csmo:#Investigation .
### https://www.escidoc.org/ontologies/csmo/#hasData
csmo:#hasData rdf:type owl:ObjectProperty ;
rdfs:label "hasData" ;
rdfs:domain csmo:#Investigation .
### https://www.escidoc.org/ontologies/csmo/#hasDataSetParameter
csmo:#hasDataSetParameter rdf:type owl:ObjectProperty ;
rdfs:label "hasDataSetParameter"@de ;
rdfs:range csmo:#DataSetParameter ;
rdfs:domain csmo:#Investigation .
### https://www.escidoc.org/ontologies/csmo/#hasDataset
csmo:#hasDataset rdf:type owl:AsymmetricProperty ,
owl:ObjectProperty ;
rdfs:label "hasDataset" ;
rdfs:domain nfo:Folder .
### https://www.escidoc.org/ontologies/csmo/#hasFacility
csmo:#hasFacility rdf:type owl:ObjectProperty ;
rdfs:label "hasFacility" ;
rdfs:domain [ rdf:type owl:Restriction ;
owl:onProperty csmo:#hasFacility ;
owl:someValuesFrom csmo:#Institution
] ;
rdfs:range [ rdf:type owl:Restriction ;
owl:onProperty csmo:#hasFacility ;
owl:someValuesFrom csmo:#Facility
] .
### https://www.escidoc.org/ontologies/csmo/#hasInstrument
csmo:#hasInstrument rdf:type owl:ObjectProperty ;
rdfs:label "hasInstrument"@en ;
rdfs:range csmo:#Instrument ;
rdfs:domain csmo:#Investigation .
### https://www.escidoc.org/ontologies/csmo/#hasInvestigation
csmo:#hasInvestigation rdf:type owl:AsymmetricProperty ,
owl:ObjectProperty ;
rdfs:label "hasInvestigation"@en ;
rdfs:range csmo:#Investigation ;
rdfs:domain csmo:#Study ;
owl:inverseOf csmo:#isInvestigationOf .
### https://www.escidoc.org/ontologies/csmo/#hasInvestigator
csmo:#hasInvestigator rdf:type owl:ObjectProperty ;
rdfs:domain csmo:#Investigation ;
rdfs:range csmo:#Investigator ;
owl:inverseOf csmo:#isInvestigatorOf .
### https://www.escidoc.org/ontologies/csmo/#hasLocation
csmo:#hasLocation rdf:type owl:ObjectProperty ;
rdfs:label "hasLocation"@en ;
rdfs:comment "An investigation might take place in a specific location."@en ;
rdfs:range gn:Feature .
### https://www.escidoc.org/ontologies/csmo/#hasMember
csmo:#hasMember rdf:type owl:ObjectProperty ;
rdfs:label "hasMember" ;
rdfs:domain csmo:#Institution ;
rdfs:range csmo:#Investigator ;
owl:inverseOf csmo:#memberOf .
### https://www.escidoc.org/ontologies/csmo/#hasParameter
csmo:#hasParameter rdf:type owl:ObjectProperty ;
rdfs:label "hasParameter"@en .
### https://www.escidoc.org/ontologies/csmo/#hasPrincipalInvestigator
csmo:#hasPrincipalInvestigator rdf:type owl:ObjectProperty ;
rdfs:label "hasPrincipalInvestigator"@en ;
rdfs:range csmo:#PrincipleInvestigator ;
rdfs:domain csmo:#Study ;
owl:inverseOf csmo:#isPrincipalInvestigatorOf .
### https://www.escidoc.org/ontologies/csmo/#hasProgramme
csmo:#hasProgramme rdf:type owl:ObjectProperty ;
rdfs:label "hasProgramme"@en ;
rdfs:domain csmo:#Policy ;
rdfs:range csmo:#Programme .
### https://www.escidoc.org/ontologies/csmo/#hasPublication
csmo:#hasPublication rdf:type owl:ObjectProperty ;
rdfs:label "hasPublication" ;
rdfs:domain csmo:#Project ;
rdfs:range csmo:#Publication ;
rdfs:domain csmo:#Study .
### https://www.escidoc.org/ontologies/csmo/#hasResult
csmo:#hasResult rdf:type owl:ObjectProperty ;
rdfs:label "hasResult" ;
rdfs:domain csmo:#Investigation ;
rdfs:range csmo:#Result ;
rdfs:domain csmo:#Study ;
owl:inverseOf csmo:#isResultOf .
### https://www.escidoc.org/ontologies/csmo/#hasRole
csmo:#hasRole rdf:type owl:ObjectProperty ;
rdfs:label "hasRole"@en ;
rdfs:range org:Role ;
rdfs:domain foaf:Person .
### https://www.escidoc.org/ontologies/csmo/#hasSample
csmo:#hasSample rdf:type owl:ObjectProperty ;
rdfs:label "hasSample"@en ;
rdfs:domain nfo:Folder ,
csmo:#Investigation ;
rdfs:range csmo:#Sample ;
owl:inverseOf csmo:#isSampleOf .
### https://www.escidoc.org/ontologies/csmo/#hasSampleParameter
csmo:#hasSampleParameter rdf:type owl:ObjectProperty ;
rdfs:label "hasSampleParameter"@en ;
rdfs:domain csmo:#Sample ;
rdfs:range csmo:#SampleParameter ;
owl:inverseOf csmo:#isSampleParameterOf .
### https://www.escidoc.org/ontologies/csmo/#hasStudy
csmo:#hasStudy rdf:type owl:ObjectProperty ;
rdfs:label "hasStudy"@en ;
rdfs:domain csmo:#Programme ,
csmo:#Project ;
rdfs:range csmo:#Study .
### https://www.escidoc.org/ontologies/csmo/#hasStudyManager
csmo:#hasStudyManager rdf:type owl:ObjectProperty ;
rdfs:label "hasStudyManager"@en .
### https://www.escidoc.org/ontologies/csmo/#hasSubDataSet
csmo:#hasSubDataSet rdf:type owl:ObjectProperty ;
rdfs:label "hasSubDataSet"@de .
### https://www.escidoc.org/ontologies/csmo/#isADOParameter
csmo:#isADOParameter rdf:type owl:ObjectProperty ;
rdfs:label "isADOParameter"@en ;
rdfs:range csmo:#AtomicDataObject ;
rdfs:domain csmo:#AtomicDataObjectParameter .
### https://www.escidoc.org/ontologies/csmo/#isDataOf
csmo:#isDataOf rdf:type owl:ObjectProperty ;
rdfs:label "associatedWith" ;
rdfs:range csmo:#Investigation ;
owl:inverseOf csmo:#hasData .
### https://www.escidoc.org/ontologies/csmo/#isDataParameterOf
csmo:#isDataParameterOf rdf:type owl:ObjectProperty ;
rdfs:label "isDataParameterOf"@en ;
rdfs:domain csmo:#Parameter .
### https://www.escidoc.org/ontologies/csmo/#isInstrumentOf
csmo:#isInstrumentOf rdf:type owl:FunctionalProperty ,
owl:ObjectProperty ;
rdfs:range csmo:#Facility ;
rdfs:domain csmo:#Instrument ;
owl:inverseOf csmo:#hasInstrument .
### https://www.escidoc.org/ontologies/csmo/#isInvestigationOf
csmo:#isInvestigationOf rdf:type owl:AsymmetricProperty ,
owl:ObjectProperty ;
rdfs:comment "Relates an Investigation to a Study"@en ;
rdfs:domain csmo:#Investigation ;
rdfs:range csmo:#Study .
### https://www.escidoc.org/ontologies/csmo/#isInvestigatorOf
csmo:#isInvestigatorOf rdf:type owl:ObjectProperty ;
rdfs:label "isInvestigatorOf"@de ;
rdfs:range csmo:#Investigation ;
rdfs:domain csmo:#Investigator .
### https://www.escidoc.org/ontologies/csmo/#isPartOf
csmo:#isPartOf rdf:type owl:ObjectProperty ;
rdfs:label "isPartOf" ;
owl:inverseOf csmo:#hasFacility ;
rdfs:range [ rdf:type owl:Restriction ;
owl:onProperty csmo:#isPartOf ;
owl:someValuesFrom csmo:#Institution
] ;
rdfs:domain [ rdf:type owl:Restriction ;
owl:onProperty csmo:#isPartOf ;
owl:someValuesFrom csmo:#Facility
] .
### https://www.escidoc.org/ontologies/csmo/#isPrincipalInvestigatorOf
csmo:#isPrincipalInvestigatorOf rdf:type owl:ObjectProperty ;
rdfs:label "isPrincipalInvestigatorOf"@en ;
rdfs:domain csmo:#PrincipleInvestigator ;
rdfs:range csmo:#Study .
### https://www.escidoc.org/ontologies/csmo/#isProgrammeOf
csmo:#isProgrammeOf rdf:type owl:ObjectProperty ;
rdfs:label "isProgrammeOf"@en ;
rdfs:comment "Provides information on the funding of a Programe"@en ;
rdfs:range csmo:#Institution ,
csmo:#Policy ;
rdfs:domain csmo:#Programme ;
owl:inverseOf csmo:#hasProgramme .
### https://www.escidoc.org/ontologies/csmo/#isResultOf
csmo:#isResultOf rdf:type owl:ObjectProperty ;
rdfs:label "isResultOf" ;
rdfs:range csmo:#Investigation ;
rdfs:domain csmo:#Result ;
rdfs:range csmo:#Study .
### https://www.escidoc.org/ontologies/csmo/#isRoleOf
csmo:#isRoleOf rdf:type owl:ObjectProperty ;
rdfs:label "isRoleOf"@en ;
rdfs:domain org:Role ;
rdfs:range foaf:Person ;
owl:inverseOf csmo:#hasRole .
### https://www.escidoc.org/ontologies/csmo/#isSampleOf
csmo:#isSampleOf rdf:type owl:ObjectProperty ;
rdfs:label "isSampleOf"@en ;
rdfs:domain csmo:#Sample ;
rdfs:range csmo:#Study .
### https://www.escidoc.org/ontologies/csmo/#isSampleParameterOf
csmo:#isSampleParameterOf rdf:type owl:ObjectProperty ;
rdfs:label "isSampleParameterOf"@en ;
rdfs:range csmo:#Sample ;
rdfs:domain csmo:#SampleParameter .
### https://www.escidoc.org/ontologies/csmo/#isStudyOf
csmo:#isStudyOf rdf:type owl:ObjectProperty ;
rdfs:label "isStudyOf"@en ;
rdfs:range csmo:#Programme ,
csmo:#Project ;
rdfs:domain csmo:#Study ;
owl:inverseOf csmo:#hasStudy .
### https://www.escidoc.org/ontologies/csmo/#issuedPolicy
csmo:#issuedPolicy rdf:type owl:ObjectProperty ;
rdfs:label "issuedPolicy"@en ;
rdfs:domain csmo:#Institution ;
rdfs:range csmo:#Policy ;
owl:inverseOf csmo:#policyCreatedBy .
### https://www.escidoc.org/ontologies/csmo/#memberOf
csmo:#memberOf rdf:type owl:ObjectProperty ;
rdfs:label "memberOf" ;
rdfs:range csmo:#Institution ;
rdfs:domain csmo:#Investigator .
### https://www.escidoc.org/ontologies/csmo/#policyCreatedBy
csmo:#policyCreatedBy rdf:type owl:ObjectProperty ;
rdfs:label "policyCreatedBy"@en ;
rdfs:range csmo:#Institution ;
rdfs:domain csmo:#Policy .
### https://www.escidoc.org/ontologies/csmo/#runBy
csmo:#runBy rdf:type owl:ObjectProperty ;
rdfs:label "runBy"@en ;
rdfs:range csmo:#Institution ;
rdfs:domain csmo:#Study ;
owl:inverseOf csmo:#runsStudy .
### https://www.escidoc.org/ontologies/csmo/#runsStudy
csmo:#runsStudy rdf:type owl:ObjectProperty ;
rdfs:label "runsStudy"@en ;
rdfs:domain csmo:#Institution ;
rdfs:range csmo:#Study .
#################################################################
#
# Data properties
#
#################################################################
### http://purl.org/dc/terms/alternative
terms:alternative rdf:type owl:DatatypeProperty ;
rdfs:label "alternative"@en ;
rdfs:comment "An alternative name for the resource."@en ;
rdfs:isDefinedBy terms: .
### http://purl.org/dc/terms/title
terms:title rdf:type owl:DatatypeProperty ;
rdfs:label "title"@en ;
rdfs:comment "A name given to the resource."@en ;
rdfs:isDefinedBy terms: ;
rdfs:range rdfs:Literal .
### http://xmlns.com/foaf/0.1/name
foaf:name rdf:type owl:DatatypeProperty ,
owl:FunctionalProperty ;
rdfs:range rdfs:Literal ;
rdfs:domain foaf:Person .
### https://www.escidoc.org/ontologies/csmo/#abstract
csmo:#abstract rdf:type owl:DatatypeProperty ;
rdfs:label "abstract"@de .
### https://www.escidoc.org/ontologies/csmo/#chemicalFormula
csmo:#chemicalFormula rdf:type owl:DatatypeProperty ;
rdfs:label "chemicalFormula"@de .
### https://www.escidoc.org/ontologies/csmo/#creationDate
csmo:#creationDate rdf:type owl:DatatypeProperty ;
rdfs:label "creationDate"@de .
### https://www.escidoc.org/ontologies/csmo/#dataStatus
csmo:#dataStatus rdf:type owl:DatatypeProperty ;
rdfs:label "dataStatus"@de ;
rdfs:range rdfs:Literal .
### https://www.escidoc.org/ontologies/csmo/#derivedPublication
csmo:#derivedPublication rdf:type owl:DatatypeProperty ;
rdfs:label "derivedPublication"@en .
### https://www.escidoc.org/ontologies/csmo/#fixity
csmo:#fixity rdf:type owl:DatatypeProperty ;
rdfs:label "fixity"@en ;
rdfs:comment "Fixity information such as checksum"@en .
### https://www.escidoc.org/ontologies/csmo/#hasDataSetStatus
csmo:#hasDataSetStatus rdf:type owl:DatatypeProperty ;
rdfs:label "hasDataSetStatus" ;
rdfs:domain nfo:Folder .
### https://www.escidoc.org/ontologies/csmo/#hasDataSetType
csmo:#hasDataSetType rdf:type owl:DatatypeProperty ;
rdfs:label "hasDataSetType" ;
rdfs:domain nfo:Folder .
### https://www.escidoc.org/ontologies/csmo/#hasKeyword
csmo:#hasKeyword rdf:type owl:DatatypeProperty ;
rdfs:label "hasKeyword"@en .
### https://www.escidoc.org/ontologies/csmo/#hasPurpose
csmo:#hasPurpose rdf:type owl:DatatypeProperty ,
owl:FunctionalProperty ;
rdfs:label "hasPurpose"@en ;
rdfs:range rdfs:Literal ;
rdfs:domain csmo:#Study .
### https://www.escidoc.org/ontologies/csmo/#hasTopic
csmo:#hasTopic rdf:type owl:DatatypeProperty ;
rdfs:label "hasTopic"@en .
### https://www.escidoc.org/ontologies/csmo/#investigationAbstract
csmo:#investigationAbstract rdf:type owl:DatatypeProperty ;
rdfs:range rdfs:Literal ;
rdfs:domain csmo:#Investigation .
### https://www.escidoc.org/ontologies/csmo/#investigationDate
csmo:#investigationDate rdf:type owl:DatatypeProperty ;
rdfs:range xsd:dateTime ;
rdfs:domain csmo:#Investigation .
### https://www.escidoc.org/ontologies/csmo/#link
csmo:#link rdf:type owl:DatatypeProperty ;
rdfs:label "link" ;
rdfs:range xsd:anyURI ;
rdfs:domain csmo:#Publication .
### https://www.escidoc.org/ontologies/csmo/#modificationDate
csmo:#modificationDate rdf:type owl:DatatypeProperty ;
rdfs:label "modificationDate"@de .
### https://www.escidoc.org/ontologies/csmo/#motivatingPublication
csmo:#motivatingPublication rdf:type owl:DatatypeProperty ;
rdfs:label "motivatingPublication"@en .
### https://www.escidoc.org/ontologies/csmo/#relatedMaterial
csmo:#relatedMaterial rdf:type owl:DatatypeProperty ;
rdfs:label "relatedMaterial"@de .
### https://www.escidoc.org/ontologies/csmo/#settings
csmo:#settings rdf:type owl:DatatypeProperty ;
rdfs:label "settings"@de .
### https://www.escidoc.org/ontologies/csmo/#studyCreationDate
csmo:#studyCreationDate rdf:type owl:DatatypeProperty ;
rdfs:label "studyCreationDate"@de .
### https://www.escidoc.org/ontologies/csmo/#studyStatus
csmo:#studyStatus rdf:type owl:DatatypeProperty ;
rdfs:label "studyStatus"@en .
### https://www.escidoc.org/ontologies/csmo/#version
csmo:#version rdf:type owl:DatatypeProperty ;
rdfs:label "version"@en .
#################################################################
#
# Classes
#
#################################################################
### http://purl.org/ontology/bibo/Document
bibo:Document rdf:type owl:Class ;
owl:equivalentClass csmo:#Publication .
### http://www.geonames.org/ontology#Feature
gn:Feature rdf:type owl:Class ;
rdfs:label "Location"@en ;
rdfs:comment "A geographical object uniquely defined by its geonames id."@en ;
skos:note "Original Label gn:Feature"@en .
### http://www.semanticdesktop.org/ontologies/2007/03/22/nfo#Folder
nfo:Folder rdf:type owl:Class ;
rdfs:label "Dataset"@en ;
rdfs:subClassOf owl:Thing ,
[ rdf:type owl:Restriction ;
owl:onProperty csmo:#hasDataSetStatus ;
owl:someValuesFrom xsd:string
] ,
[ rdf:type owl:Restriction ;
owl:onProperty csmo:#hasDataSetType ;
owl:someValuesFrom xsd:string
] ,
[ rdf:type owl:Restriction ;
owl:onProperty csmo:#hasDataset ;
owl:someValuesFrom nfo:Folder
] ,
[ rdf:type owl:Restriction ;
owl:onProperty csmo:#hasSample ;
owl:onClass csmo:#Sample ;
owl:maxQualifiedCardinality "1"^^xsd:nonNegativeInteger
] ;
rdfs:comment "A resource containing a finite sequence of bytes with arbitrary information, that is available to a computer program and is usually based on some kind of durable storage. A file is durable in the sense that it remains available for programs to use after the current program has finished."@en ;
terms:description """Datafile
The CSMD takes a hierarchical view of data holdings, as data sets may contain other dataset as well as units of storage, typically datafiles. Each datafile has more detailed information, including its name, version, location, data format, creation and modification time, and fixity information such as a Checksum. """@en ;
rdfs:isDefinedBy nfo:Folder .
### http://www.w3.org/ns/org#Organisation
org:Organisation rdf:type owl:Class ;
owl:equivalentClass csmo:#Institution .
### http://www.w3.org/ns/org#Role
org:Role rdf:type owl:Class ;
rdfs:label "Role"@en ;
rdfs:subClassOf owl:Thing ,
[ rdf:type owl:Restriction ;
owl:onProperty csmo:#hasAccess ;
owl:someValuesFrom nfo:Folder
] ,
[ rdf:type owl:Restriction ;
owl:onProperty csmo:#hasAccess ;
owl:someValuesFrom csmo:#Investigation
] ;
rdfs:comment "Denotes a role that a Person or other Agent can take in an organization."@en ;
rdfs:isDefinedBy "org:Role" ;
skos:note "sameAs foaf:Group" .
### http://www.w3.org/ns/org#Site
org:Site rdf:type owl:Class ;
rdfs:label "Site"@en ;
owl:equivalentClass csmo:#Facility ;
rdfs:subClassOf owl:Thing ;
rdfs:comment "An office or other premise at which the study/investigation takes place is located. Many studies/investigations are spread across multiple sites. In most cases a Site will be a physical location."@en .
### http://xmlns.com/foaf/0.1/Agent
foaf:Agent rdf:type owl:Class .
### http://xmlns.com/foaf/0.1/Person
foaf:Person rdf:type owl:Class ;
owl:equivalentClass csmo:#Investigator ;
rdfs:subClassOf foaf:Agent ,
[ rdf:type owl:Restriction ;
owl:onProperty org:'member_of' ;