Apptainer.def

Bootstrap: docker
From: ubuntu:latest

%post
    export DEBIAN_FRONTEND=noninteractive && \
    apt-get clean all && apt-get update && apt-get -y upgrade && \
    apt-get -yq install build-essential cmake libboost-math-dev libboost-program-options-dev libboost-test-dev libboost-serialization-dev libarmadillo-dev binutils-dev python3-pandas python3-numpy python3-dev python-setuptools libensmallen-dev libstb-dev liblapack-dev libmlpack-dev libblas-dev libboost-dev libboost-iostreams-dev libarmadillo-dev && \
    apt -y install git && \
    cd /usr && git clone --recursive https://github.com/Transipedia/KaMRaT.git && cd KaMRaT && \
    cmake . && make -j && \
    echo "Creation Complete !"

%environment
    export LC_ALL=C
    export PATH="/usr/KaMRaT/apps/:$PATH"

%runscript
    kamrat