From 0b6d4676dabf88f9185a91e05225cf356343558f Mon Sep 17 00:00:00 2001 From: ColinFay Date: Wed, 28 Feb 2024 16:27:50 +0000 Subject: [PATCH] Re-build README.md --- README.md | 493 ++++++------------------------------------------------ 1 file changed, 54 insertions(+), 439 deletions(-) diff --git a/README.md b/README.md index 315c398e..1bec8440 100644 --- a/README.md +++ b/README.md @@ -108,454 +108,69 @@ You’re reading the doc about version: 0.4.20 This `README` has been compiled on the Sys.time() - #> [1] "2024-02-28 16:04:13 UTC" + #> [1] "2024-02-28 16:25:55 UTC" Here are the test & coverage results: devtools::check(quiet = TRUE) #> ℹ Loading golem - #> ✖ add_dockerfiles_renv.R:149: @param refers to unavailable topic - #> attachment::att_amend_desc. - #> ✖ add_dockerfiles_renv.R:152: @param refers to unavailable topic - #> renv::snapshot. #> ── R CMD check results ─────────────────────────────────────── golem 0.4.20 ──── - #> Duration: 1m 16.3s + #> Duration: 1m 11.1s #> - #> ❯ checking tests ... - #> See below... - #> - #> ❯ checking package dependencies ... NOTE - #> Packages suggested but not available for checking: - #> 'attachment', 'dockerfiler', 'mockery', 'renv', 'rsconnect', - #> 'spelling' - #> - #> ❯ checking Rd cross-references ... NOTE - #> Packages unavailable to check Rd xrefs: ‘attachment’, ‘renv’ - #> - #> ── Test failures ───────────────────────────────────────────────── testthat ──── - #> - #> > library(testthat) - #> > library(golem) - #> > - #> > test_check("golem") - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/zctkynojhc20240228160448.494241 - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummygolem1f29d049237 - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummygolem1f291fec6c5 - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummygolem1f2937135ae7 - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummygolem1f2928960d8b - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummygolem1f29310a1c25 - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> The path file doesn't exist. - #> It's possible that you might not be in a {golem} based project. - #> Do you want to create the {golem} files?File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummy1f2971fafd66/koko - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummy1f2971fafd66/kokogui - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummy1f2971fafd66/sesame - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummy1f2971fafd66/gigit - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummy1f2971fafd66/gigitgui - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummy1f2971fafd66/withooutcomments - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummy1f2971fafd66/withooutcommentsgui - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummy1f2971fafd66/2cou_cou - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummy1f2971fafd66/2cou_cou - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummy1f2971fafd66/examplehook - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummy1f2971fafd66/examplehookgui - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> i the `authors` argument is empty, using `author_first_name`, `author_last_name`, `author_email` and `author_orcid` to fill the DESCRIPTION file. - #> v Setting `golem_version` to 0.0.0.9000 - #> v Setting `golem_name` to zctkynojhc20240228160448.494241 - #> v DESCRIPTION file modified - #> -- Setting {golem} options in `golem-config.yml` ------------------------------- - #> v Setting `golem_name` to zctkynojhc20240228160448.494241 - #> v Setting `golem_wd` to golem::pkg_path() - #> You can change golem working directory with set_golem_wd('path/to/wd') - #> v Setting `golem_version` to 0.0.0.9000 - #> v Setting `app_prod` to FALSE - #> -- Setting {usethis} project as `golem_wd` ------------------------------------- - #> % Total % Received % Xferd Average Speed Time Time Time Current - #> Dload Upload Total Spent Left Speed - #> 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0100 2734 100 2734 0 0 28417 0 --:--:-- --:--:-- --:--:-- 28479 - #> Installing package into '/tmp/RtmpBXmSgR/RLIBS_1c6454e2a000' - #> (as 'lib' is unspecified) - #> trying URL 'https://cran.rstudio.com/src/contrib/attachment_0.4.1.tar.gz' - #> Content type 'application/x-gzip' length 196468 bytes (191 KB) - #> ================================================== - #> downloaded 191 KB - #> - #> * installing *source* package ‘attachment’ ... - #> ** package ‘attachment’ successfully unpacked and MD5 sums checked - #> ** using staged installation - #> ** R - #> ** inst - #> ** byte-compile and prepare package for lazy loading - #> ** help - #> *** installing help indices - #> *** copying figures - #> ** building package indices - #> ** installing vignettes - #> ** testing if installed package can be loaded from temporary location - #> ** testing if installed package can be loaded from final location - #> ** testing if installed package keeps a record of temporary installation path - #> * DONE (attachment) - #> - #> The downloaded source packages are in - #> '/tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/downloaded_packages' - #> Installing package into '/tmp/RtmpBXmSgR/RLIBS_1c6454e2a000' - #> (as 'lib' is unspecified) - #> also installing the dependency 'pak' - #> - #> trying URL 'https://cran.rstudio.com/src/contrib/pak_0.7.1.tar.gz' - #> Content type 'application/x-gzip' length 2022732 bytes (1.9 MB) - #> ================================================== - #> downloaded 1.9 MB - #> - #> trying URL 'https://cran.rstudio.com/src/contrib/dockerfiler_0.2.2.tar.gz' - #> Content type 'application/x-gzip' length 269151 bytes (262 KB) - #> ================================================== - #> downloaded 262 KB - #> - #> * installing *source* package ‘pak’ ... - #> ** package ‘pak’ successfully unpacked and MD5 sums checked - #> ** using staged installation - #> ** Running ./configure - #> ** libs - #> Current platform: x86_64-pc-linux-gnu - #> Build platform: - #> Target platform: - #> - #> Compiling R6 - #> - #> Compiling cli - #> using C compiler: ‘gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’ - #> make[1]: Entering directory '/tmp/RtmpBXmSgR/working_dir/Rtmpkq2OX9/R.INSTALL1f922d0cbea/pak/src/library/cli/src' - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c ansi.c -o ansi.o - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c cleancall.c -o cleancall.o - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c diff.c -o diff.o - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c errors.c -o errors.o - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c glue.c -o glue.o - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c init.c -o init.o - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c inst.c -o inst.o - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c keypress-unix.c -o keypress-unix.o - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c keypress-win.c -o keypress-win.o - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c keypress.c -o keypress.o - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c md5.c -o md5.o - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c progress-altrep.c -o progress-altrep.o - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c progress.c -o progress.o - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c sha1.c -o sha1.o - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c sha256.c -o sha256.o - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c thread.c -o thread.o - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c tty.c -o tty.o - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c utf8.c -o utf8.o - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c utils.c -o utils.o - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c vt.c -o vt.o - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c vtparse.c -o vtparse.o - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c vtparse_table.c -o vtparse_table.o - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c win-utf8.c -o win-utf8.o - #> gcc -I"/opt/R/4.3.2/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -I../inst/include -fpic -g -O2 -c winfiles.c -o winfiles.o - #> gcc -shared -L/opt/R/4.3.2/lib/R/lib -L/usr/local/lib -o cli.so ansi.o cleancall.o diff.o errors.o glue.o init.o inst.o keypress-unix.o keypress-win.o keypress.o md5.o progress-altrep.o progress.o sha1.o sha256.o thread.o tty.o utf8.o utils.o vt.o vtparse.o vtparse_table.o win-utf8.o winfiles.o -L/opt/R/4.3.2/lib/R/lib -lR - #> make[1]: Leaving directory '/tmp/RtmpBXmSgR/working_dir/Rtmpkq2OX9/R.INSTALL1f922d0cbea/pak/src/library/cli/src' - #> make[1]: Entering directory '/tmp/RtmpBXmSgR/working_dir/Rtmpkq2OX9/R.INSTALL1f922d0cbea/pak/src/library/cli/src' - #> make[1]: Leaving directory '/tmp/RtmpBXmSgR/working_dir/Rtmpkq2OX9/R.INSTALL1f922d0cbea/pak/src/library/cli/src' - #> installing to /tmp/RtmpBXmSgR/RLIBS_1c6454e2a000/00LOCK-pak/00new/pak/library/cli/libs - #> - #> Compiling curl - #> Package libcurl was not found in the pkg-config search path. - #> Perhaps you should add the directory containing `libcurl.pc' - #> to the PKG_CONFIG_PATH environment variable - #> No package 'libcurl' found - #> Package libcurl was not found in the pkg-config search path. - #> Perhaps you should add the directory containing `libcurl.pc' - #> to the PKG_CONFIG_PATH environment variable - #> No package 'libcurl' found - #> Using PKG_CFLAGS= - #> Using PKG_LIBS=-lcurl - #> --------------------------- [ANTICONF] -------------------------------- - #> Configuration failed because libcurl was not found. Try installing: - #> * deb: libcurl4-openssl-dev (Debian, Ubuntu, etc) - #> * rpm: libcurl-devel (Fedora, CentOS, RHEL) - #> If libcurl is already installed, check that 'pkg-config' is in your - #> PATH and PKG_CONFIG_PATH contains a libcurl.pc file. If pkg-config - #> is unavailable you can set INCLUDE_DIR and LIB_DIR manually via: - #> R CMD INSTALL --configure-vars='INCLUDE_DIR=... LIB_DIR=...' - #> -------------------------- [ERROR MESSAGE] --------------------------- - #> :1:10: fatal error: curl/curl.h: No such file or directory - #> compilation terminated. - #> -------------------------------------------------------------------- - #> ERROR: configuration failed for package ‘curl’ - #> Error in install_one(pkg, lib = lib) : FAILED - #> Calls: install_embedded_main -> install_all -> install_one - #> Execution halted - #> installing via 'install.libs.R' to /tmp/RtmpBXmSgR/RLIBS_1c6454e2a000/00LOCK-pak/00new/pak - #> Error in eval(ei, envir) : Compilation failed. - #> * removing ‘/tmp/RtmpBXmSgR/RLIBS_1c6454e2a000/pak’ - #> ERROR: dependency ‘pak’ is not available for package ‘dockerfiler’ - #> * removing ‘/tmp/RtmpBXmSgR/RLIBS_1c6454e2a000/dockerfiler’ - #> - #> The downloaded source packages are in - #> '/tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/downloaded_packages' - #> Installing package into '/tmp/RtmpBXmSgR/RLIBS_1c6454e2a000' - #> (as 'lib' is unspecified) - #> trying URL 'https://cran.rstudio.com/src/contrib/renv_1.0.4.tar.gz' - #> Content type 'application/x-gzip' length 1165157 bytes (1.1 MB) - #> ================================================== - #> downloaded 1.1 MB - #> - #> * installing *source* package ‘renv’ ... - #> ** package ‘renv’ successfully unpacked and MD5 sums checked - #> ** using staged installation - #> ** R - #> ** inst - #> ** byte-compile and prepare package for lazy loading - #> ** help - #> *** installing help indices - #> *** copying figures - #> ** building package indices - #> ** installing vignettes - #> ** testing if installed package can be loaded from temporary location - #> ** testing if installed package can be loaded from final location - #> ** testing if installed package keeps a record of temporary installation path - #> * DONE (renv) - #> - #> The downloaded source packages are in - #> '/tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/downloaded_packages' - #> Installing package into '/tmp/RtmpBXmSgR/RLIBS_1c6454e2a000' - #> (as 'lib' is unspecified) - #> also installing the dependency 'packrat' - #> - #> trying URL 'https://cran.rstudio.com/src/contrib/packrat_0.9.2.tar.gz' - #> Content type 'application/x-gzip' length 376653 bytes (367 KB) - #> ================================================== - #> downloaded 367 KB - #> - #> trying URL 'https://cran.rstudio.com/src/contrib/rsconnect_1.2.1.tar.gz' - #> Content type 'application/x-gzip' length 470779 bytes (459 KB) - #> ================================================== - #> downloaded 459 KB - #> - #> * installing *source* package ‘packrat’ ... - #> ** package ‘packrat’ successfully unpacked and MD5 sums checked - #> ** using staged installation - #> ** R - #> ** inst - #> ** byte-compile and prepare package for lazy loading - #> ** help - #> *** installing help indices - #> ** building package indices - #> ** testing if installed package can be loaded from temporary location - #> ** testing if installed package can be loaded from final location - #> ** testing if installed package keeps a record of temporary installation path - #> * DONE (packrat) - #> * installing *source* package ‘rsconnect’ ... - #> ** package ‘rsconnect’ successfully unpacked and MD5 sums checked - #> ** using staged installation - #> ** R - #> ** inst - #> ** byte-compile and prepare package for lazy loading - #> ** help - #> *** installing help indices - #> *** copying figures - #> ** building package indices - #> ** installing vignettes - #> ** testing if installed package can be loaded from temporary location - #> ** testing if installed package can be loaded from final location - #> ** testing if installed package keeps a record of temporary installation path - #> * DONE (rsconnect) - #> - #> The downloaded source packages are in - #> '/tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/downloaded_packages' - #> [1] "test" - #> [1] "test" - #> [1] "test" - #> [1] "test" - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummygolem1f2943d3400f - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummygolem1f29791e5b1e - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> trying URL 'https://raw.githubusercontent.com/ThinkR-open/golem/dev/inst/utils/testfile_template_plainfile.txt' - #> Content type 'text/plain; charset=utf-8' length 11 bytes - #> ================================================== - #> downloaded 11 bytes - #> - #> trying URL 'https://raw.githubusercontent.com/ThinkR-open/golem/dev/inst/utils/testfile_template_html.html' - #> Content type 'text/plain; charset=utf-8' length 102 bytes - #> ================================================== - #> downloaded 102 bytes - #> - #> trying URL 'https://raw.githubusercontent.com/ThinkR-open/golem/dev/inst/utils/testfile_template_js.js' - #> Content type 'text/plain; charset=utf-8' length 88 bytes - #> ================================================== - #> downloaded 88 bytes - #> - #> trying URL 'https://raw.githubusercontent.com/ThinkR-open/golem/dev/inst/utils/testfile_template_css.css' - #> Content type 'text/plain; charset=utf-8' length 137 bytes - #> ================================================== - #> downloaded 137 bytes - #> - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummygolem1f297515eaf5 - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> Loading required namespace: DT - #> Failed with error: 'there is no package called 'DT'' - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummygolem1f296d8c39ea - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummygolem1f2940e003c5 - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummygolem1f29ac5d133 - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummygolem1f29568ce2c4 - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummygolem1f29698e4aa0 - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> The path some_type doesn't exist, create? - #> To use this html file as a template, add the following code in your UI: - #> htmlTemplate( - #> app_sys("app/www/NAME-OF-HTML-FILE.html"), - #> body = tagList() - #> # add here other template arguments - #> ) - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummygolem1f293aa4b2d1 - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummygolem1f293a4afed4 - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/dummygolem1f294a4c9c12 - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> File .here already exists in /tmp/RtmpBXmSgR/working_dir/RtmpxMF9tX/uhrvkxdsxx - #> We noticed that some dev dependencies are not installed. - #> You can install them with `golem::install_dev_deps()`. - #> Setting `RoxygenNote` to "7.3.1" - #> i Loading uhrvkxdsxx - #> Writing 'NAMESPACE' - #> i Loading uhrvkxdsxx - #> [ FAIL 5 | WARN 2 | SKIP 7 | PASS 375 ] - #> - #> ══ Skipped tests (7) ═══════════════════════════════════════════════════════════ - #> • dockerfiler cannot be loaded (4): 'test-add_deploy_helpers.R:37:3', - #> 'test-extra_sysreqs.R:1:1', 'test-renv_stuff.R:4:3', 'test-renv_stuff.R:41:3' - #> • exists("run_app") is not TRUE (2): 'test-with_opt.R:12:7', - #> 'test-with_opt.R:54:9' - #> • renv cannot be loaded (1): 'test-add_deploy_helpers.R:3:3' - #> - #> ══ Warnings ════════════════════════════════════════════════════════════════════ - #> ── Warning ('test-install_dev_deps.R:2:3'): install_dev_deps works ───────────── - #> installation of package 'pak' had non-zero exit status - #> Backtrace: - #> ▆ - #> 1. └─golem::install_dev_deps(force_install = TRUE, repos = "https://cran.rstudio.com") at test-install_dev_deps.R:2:3 - #> 2. └─utils (local) f(pak, ...) - #> ── Warning ('test-install_dev_deps.R:2:3'): install_dev_deps works ───────────── - #> installation of package 'dockerfiler' had non-zero exit status - #> Backtrace: - #> ▆ - #> 1. └─golem::install_dev_deps(force_install = TRUE, repos = "https://cran.rstudio.com") at test-install_dev_deps.R:2:3 - #> 2. └─utils (local) f(pak, ...) - #> - #> ══ Failed tests ════════════════════════════════════════════════════════════════ - #> ── Error ('test-config.R:245:3'): get_current_config() interactively recreates files upon user wish ── - #> - #> Error in `loadNamespace(x)`: there is no package called 'mockery' - #> Backtrace: - #> ▆ - #> 1. └─base::loadNamespace(x) at test-config.R:245:3 - #> 2. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL) - #> 3. └─base (local) withOneRestart(expr, restarts[[1L]]) - #> 4. └─base (local) doWithOneRestart(return(expr), restart) - #> ── Error ('test-config.R:289:3'): get_current_config() interactively returns NULL upon user wish ── - #> - #> Error in `loadNamespace(x)`: there is no package called 'mockery' - #> Backtrace: - #> ▆ - #> 1. └─base::loadNamespace(x) at test-config.R:289:3 - #> 2. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL) - #> 3. └─base (local) withOneRestart(expr, restarts[[1L]]) - #> 4. └─base (local) doWithOneRestart(return(expr), restart) - #> ── Failure ('test-install_dev_deps.R:28:5'): install_dev_deps works ──────────── - #> rlang::is_installed(pak) is not TRUE - #> - #> `actual`: FALSE - #> `expected`: TRUE - #> ── Error ('test-utils.R:100:5'): file creation utils work interactively with user mimick 'no' ── - #> - #> Error in `loadNamespace(x)`: there is no package called 'mockery' - #> Backtrace: - #> ▆ - #> 1. ├─withr::with_dir(...) at test-utils.R:97:3 - #> 2. │ └─base::force(code) - #> 3. └─base::loadNamespace(x) at test-utils.R:100:5 - #> 4. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL) - #> 5. └─base (local) withOneRestart(expr, restarts[[1L]]) - #> 6. └─base (local) doWithOneRestart(return(expr), restart) - #> ── Error ('test-utils.R:139:5'): file creation utils work interactively with user mimick 'yes' ── - #> - #> Error in `loadNamespace(x)`: there is no package called 'mockery' - #> Backtrace: - #> ▆ - #> 1. ├─withr::with_dir(...) at test-utils.R:131:3 - #> 2. │ └─base::force(code) - #> 3. └─base::loadNamespace(x) at test-utils.R:139:5 - #> 4. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL) - #> 5. └─base (local) withOneRestart(expr, restarts[[1L]]) - #> 6. └─base (local) doWithOneRestart(return(expr), restart) - #> - #> [ FAIL 5 | WARN 2 | SKIP 7 | PASS 375 ] - #> Error: Test failures - #> Execution halted - #> - #> 1 error ✖ | 0 warnings ✔ | 2 notes ✖ - #> Error: R CMD check found ERRORs + #> 0 errors ✔ | 0 warnings ✔ | 0 notes ✔ covr::package_coverage() - #> Error: Failure in `/tmp/RtmpRdE1Bs/R_LIBS1b6d7cf0d5f/golem/golem-tests/testthat.Rout.fail` - #> () NULL) - #> 5. └─base (local) withOneRestart(expr, restarts[[1L]]) - #> 6. └─base (local) doWithOneRestart(return(expr), restart) - #> - #> [ FAIL 5 | WARN 2 | SKIP 7 | PASS 375 ] - #> Error: Test failures - #> Execution halted + #> golem Coverage: 85.38% + #> R/addins.R: 0.00% + #> R/bootstrap_rstudio_api.R: 0.00% + #> R/enable_roxygenize.R: 0.00% + #> R/get_sysreqs.R: 0.00% + #> R/sanity_check.R: 0.00% + #> R/test_helpers.R: 30.26% + #> R/js.R: 43.75% + #> R/reload.R: 45.36% + #> R/install_dev_deps.R: 60.87% + #> R/bootstrap_attachment.R: 61.54% + #> R/bootstrap_dockerfiler.R: 63.33% + #> R/bootstrap_desc.R: 66.67% + #> R/add_dockerfiles.R: 74.19% + #> R/add_r_files.R: 78.50% + #> R/bootstrap_usethis.R: 78.57% + #> R/modules_fn.R: 78.71% + #> R/use_recommended.R: 78.79% + #> R/golem-yaml-set.R: 83.02% + #> R/use_utils.R: 83.33% + #> R/utils.R: 83.75% + #> R/add_rstudio_files.R: 88.52% + #> R/add_resource_path.R: 88.89% + #> R/create_golem.R: 89.47% + #> R/make_dev.R: 90.00% + #> R/add_files.R: 91.96% + #> R/golem-yaml-get.R: 93.18% + #> R/add_dockerfiles_renv.R: 93.78% + #> R/run_dev.R: 95.65% + #> R/desc.R: 96.67% + #> R/use_favicon.R: 96.67% + #> R/boostrap_cli.R: 100.00% + #> R/boostrap_crayon.R: 100.00% + #> R/boostrap_fs.R: 100.00% + #> R/bootstrap_pkgload.R: 100.00% + #> R/bootstrap_roxygen2.R: 100.00% + #> R/browser_button.R: 100.00% + #> R/bundle_resources.R: 100.00% + #> R/config.R: 100.00% + #> R/disable_autoload.R: 100.00% + #> R/globals.R: 100.00% + #> R/golem_welcome_page.R: 100.00% + #> R/golem-yaml-utils.R: 100.00% + #> R/is_golem.R: 100.00% + #> R/is_running.R: 100.00% + #> R/pkg_tools.R: 100.00% + #> R/set_golem_options.R: 100.00% + #> R/templates.R: 100.00% + #> R/use_files.R: 100.00% + #> R/use_readme.R: 100.00% + #> R/with_opt.R: 100.00% ## CoC