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uAUG_lost - AUG lost variant #627

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CristianRiccio opened this issue Sep 13, 2023 · 0 comments
Open

uAUG_lost - AUG lost variant #627

CristianRiccio opened this issue Sep 13, 2023 · 0 comments

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@CristianRiccio
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What is this request referring to?
A variant which results in the loss of an AUG codon in an ORF in a 5'UTR.

What is the name you would like SO to give the term?
5_prime_UTR_uORF_AUG_codon_loss_variant

What is the definition that you would like for this term?
A 5'UTR variant where an AUG codon is lost in an upstream open reading frame.

Synonyms
uAUG_lost(UTRannotator)

Parent Term
5_prime_UTR_uORF_AUG_codon_variant

Relevant Publications
PMID: 32461616, Whiffin et al 2020
Characterising the loss-of-function impact of 5' untranslated region variants in 15,708 individuals. (Nature Communications)

PMID: 32926138, Zhang et al 2021
Annotating high-impact 5'untranslated region variants with the UTRannotator (Bioinformatics)

@CristianRiccio CristianRiccio changed the title uAUG_lost uAUG_lost - AUG lost variant Sep 13, 2023
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