diff --git a/.github/workflows/dockerhub.yml b/.github/workflows/dockerhub.yml index 3367d6f..a9901d7 100644 --- a/.github/workflows/dockerhub.yml +++ b/.github/workflows/dockerhub.yml @@ -1,7 +1,7 @@ --- -# Build and publish docker image(s) -# Publishing to Dockerhub requires a username and token -# as the secrets DOCKERHUB_USERNAME and DOCKERHUB_TOKEN +# Build and publish image(s) to GitHub (ghcr.io) +# Publishing to GitHub requires a username (who triggered the action) +# and password (as the secrets GITHUB_TOKEN) # remember to change repo-name and set dockerfile(s)/image name(s) in the matrix name: Publish Docker image @@ -31,22 +31,13 @@ jobs: matrix: include: - dockerfile: Dockerfiles/Dockerfile - images: | - docker.io/scilifelabdatacentre/covid-sample-collection-database - ghcr.io/scilifelabdatacentre/covid-sample-collection-database + images: ghcr.io/scilifelabdatacentre/covid-sample-collection-database permissions: contents: read packages: write steps: - name: Check out the repo uses: actions/checkout@v3 - # only needed when publishing to Dockerhub - - name: Log in to Docker Hub - uses: docker/login-action@v2 - with: - # available in scilifelabdatacentre, ask admin for help - username: ${{ secrets.DOCKERHUB_USERNAME }} - password: ${{ secrets.DOCKERHUB_TOKEN }} # only needed when publishing to Github (ghcr.io) - name: Log in to Github Container Repository uses: docker/login-action@v2 diff --git a/content/_index.md b/content/_index.md index 6482085..6b308ad 100644 --- a/content/_index.md +++ b/content/_index.md @@ -1,5 +1,5 @@ --- -title: Home +title: Swedish COVID-19 Sample Collection Database aliases: /menu/main/app-scd/ --- diff --git a/content/collections/NAT/1.md b/content/collections/NAT/1.md index 41606ea..116533b 100644 --- a/content/collections/NAT/1.md +++ b/content/collections/NAT/1.md @@ -25,7 +25,7 @@ diagnosis_available: ["urn:miriam:icd:U07.1"] order_of_magnitude_donors: autopsy: minors: -inclusion_criteria: Alla provgivare som gav ett informerat samtycke i samband med provtagning som visade ettt positivt svar, oavsett ålder och kön. +inclusion_criteria: Sample donors that provided informed consent for inclusion, regardless of age or sex. exclusion_criteria: materials: [Nasal swab,Throat swab] head_firstname: diff --git a/content/collections/NAT/_index.md b/content/collections/NAT/_index.md index 8e5f9e8..d7dd502 100644 --- a/content/collections/NAT/_index.md +++ b/content/collections/NAT/_index.md @@ -7,7 +7,7 @@ country: SE biobank_sverige: TRUE ivo_regnum: N/A (individual regional biobanks) bbmri_id: -website_url: https://biobanksverige.se/kontakta-oss/biobankssamordnare-och-nej-talonger/ +website_url: https://biobanksverige.se/forskning/ description: address: contact: c19dp:contact:SE_NAT diff --git a/layouts/partials/head.html b/layouts/partials/head.html index 628de82..233320e 100644 --- a/layouts/partials/head.html +++ b/layouts/partials/head.html @@ -2,7 +2,7 @@ - {{ if eq .Page.Section "collections" }} {{ .Params.name }}{{ else }}{{ .Title }}{{ end }} | {{ .Site.Title }} + {{ if eq .Page.Section "collections" }} {{ .Params.name }} | {{ .Site.Title }}{{ else if eq .Title "Swedish COVID-19 Sample Collection Database" }} {{ .Title }}{{ else }}{{ .Title }} | {{ .Site.Title }}{{ end }}