From 2838425b85b8c36376c7f4cec2a98abefc627120 Mon Sep 17 00:00:00 2001 From: Tom Gillespie Date: Mon, 4 Mar 2024 10:32:13 -0800 Subject: [PATCH 1/5] neurons sparc-nlp updates for femrep --- ttl/generated/neurons/sparc-nlp.ttl | 2475 ++++++++++++++++++++++++++- 1 file changed, 2389 insertions(+), 86 deletions(-) diff --git a/ttl/generated/neurons/sparc-nlp.ttl b/ttl/generated/neurons/sparc-nlp.ttl index 648a17fd..e3db9f9f 100644 --- a/ttl/generated/neurons/sparc-nlp.ttl +++ b/ttl/generated/neurons/sparc-nlp.ttl @@ -19,10 +19,1889 @@ owl:imports , , ; - prov:wasGeneratedBy . + prov:wasGeneratedBy . ### Classes + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-pre ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0016508 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0739295 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0787009 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0789862 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0007715 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0007716 ] ] ) ] ; + rdfs:label "T1-L2 spinal cord to paravertebral sympathetic chain of T12-L1 via white rami communicantes" ; + ilxtr:curatorNote "Wulf (2023) https://doi.org/10.3389/fncel.2023.999253 mentioned about the sympathetic innervation “The SPNs reside in the intermediolateral cell column (IML) of thoracolumbar spinal cord segments T1-L2 (McLachlan and Oldfield, 1981; Oldfield and McLachlan, 1981; Anderson et al., 1989)”. In light of the absense of experimental data on the level of the spinal cord that this connection arises from and suggested by the knowledge expert we decided to include all the sympathetic spinal cord from T1-L2." ; + ilxtr:genLabel "Rattus norvegicus female lumbar subsegment of spinal cord thoracic subsegment of spinal cord (with-axon-in pelvic ganglion) (with-axon-presynaptic-element-in First lumbar ganglion Thirteenth thoracic ganglion Twelfth thoracic ganglion) (projecting-onto ilxtr:sparc-nlp/femrep/31 ilxtr:sparc-nlp/femrep/32 ilxtr:sparc-nlp/femrep/33) Sympathetic Pre-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation , + ; + ilxtr:neuronPartialOrder ( + "blank" + ( + UBERON:0007715 + ( + UBERON:0016508 + ( + ILX:0739295 ) + ( + ILX:0787009 ) + ( + ILX:0789862 ) ) ) + ( + UBERON:0007716 + ( + UBERON:0016508 ) ) ) ; + ilxtr:reference "Mónica Brauer (2015) https://doi.org/10.1016/j.autneu.2014.11.009, Houdeau (1998) http://dx.doi.org/10.1002/(SICI)1096-9861(19980928)399:3%3C403::AID-CNE8%3E3.0.CO;2-4" . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-post ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0793832 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0794730 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0003715 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0794765 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0739295 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0787009 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0789862 ] ] ) ] ; + rdfs:label "paravertebral sympathetic chain of T12-L1 to blood vessel of the upper uterus via splanchnic nerve via aortecorenal ganglion via ovarian plexus nerve" ; + ilxtr:curatorNote "1) The term \"celiac\" was delete from \"aorticorenal ganglion\" because it will bring more confusion than clarity here. In Houdeau (1998) in figure 7 the ganglia are depicted together. As I understand celiac ganglion gives rise and is closely connected with aorticorenal so it is safe to include the aorticorenal ganglion here. 2) IZ: I changed the original destination \"upper uterine blood vessel of the myometrium or endometrium\" to \"blood vessel of the upper uterus\" that covers the vasculature of the upper uterine segment." ; + ilxtr:genLabel "Rattus norvegicus female First lumbar ganglion Thirteenth thoracic ganglion Twelfth thoracic ganglion (with-axons-in aorticorenal ganglion ovarian nerve plexus splanchnic nerve) (with-axon-presynaptic-element-in blood vessel of the upper uterus) Sympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation , + , + ; + ilxtr:neuronPartialOrder ( + "blank" + ( + ILX:0739295 + ( + UBERON:0003715 + ( + ILX:0794730 + ( + ILX:0793832 + ( + ILX:0794765 ) ) ) ) ) + ( + ILX:0787009 + ( + UBERON:0003715 ) ) + ( + ILX:0789862 + ( + UBERON:0003715 ) ) ) ; + ilxtr:reference "Mónica Brauer (2015) https://doi.org/10.1016/j.autneu.2014.11.009, Garfield (1986) https://doi.org/10.1152/ajpcell.1986.251.1.C41 , Houdeau (1998) http://dx.doi.org/10.1002/(SICI)1096-9861(19980928)399:3%3C403::AID-CNE8%3E3.0.CO;2-4" . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-post ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0793832 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0794730 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0003715 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0794767 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0739295 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0787009 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0789862 ] ] ) ] ; + rdfs:label "paravertebral sympathetic chain of T12-L1 to smooth muscle of the upper uterus via splanchnic nerve via aortecorenal ganglion via ovarian plexus nerve" ; + ilxtr:genLabel "Rattus norvegicus female First lumbar ganglion Thirteenth thoracic ganglion Twelfth thoracic ganglion (with-axons-in aorticorenal ganglion ovarian nerve plexus splanchnic nerve) (with-axon-presynaptic-element-in smooth muscle of the upper uterus) Sympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation , + ; + ilxtr:neuronPartialOrder ( + "blank" + ( + ILX:0739295 + ( + UBERON:0003715 + ( + ILX:0794730 + ( + ILX:0793832 + ( + ILX:0794767 ) ) ) ) ) + ( + ILX:0787009 + ( + UBERON:0003715 ) ) + ( + ILX:0789862 + ( + UBERON:0003715 ) ) ) ; + ilxtr:reference "Garfield (1986) https://doi.org/10.1152/ajpcell.1986.251.1.C41 , Houdeau (1998) http://dx.doi.org/10.1002/(SICI)1096-9861(19980928)399:3%3C403::AID-CNE8%3E3.0.CO;2-4" . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0793832 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0794730 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0003715 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0003984 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0739295 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0787009 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0789862 ] ] ) ] ; + rdfs:label "paravertebral sympathetic chain of T12-L1 to uterine tube infundibulum via splanchnic nerve via aortecorenal ganglion via ovarian plexus nerve" ; + ilxtr:genLabel "First lumbar ganglion Thirteenth thoracic ganglion Twelfth thoracic ganglion (with-axons-in aorticorenal ganglion ovarian nerve plexus splanchnic nerve) (with-axon-presynaptic-element-in uterine tube infundibulum) neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation ; + ilxtr:neuronPartialOrder ( + "blank" + ( + ILX:0739295 + ( + UBERON:0003715 + ( + ILX:0794730 + ( + ILX:0793832 + ( + UBERON:0003984 ) ) ) ) ) + ( + ILX:0787009 + ( + UBERON:0003715 ) ) + ( + ILX:0789862 + ( + UBERON:0003715 ) ) ) ; + ilxtr:reference "Houdeau (1998) http://dx.doi.org/10.1002/(SICI)1096-9861(19980928)399:3%3C403::AID-CNE8%3E3.0.CO;2-4" . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-pre ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0003715 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0794764 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0007715 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0007716 ] ] ) ] ; + rdfs:label "T1-L2 spinal cord to suprarenal ganglion via splanchnic nerve" ; + ilxtr:curatorNote "Wulf (2023) https://doi.org/10.3389/fncel.2023.999253 mentioned about the sympathetic innervation “The SPNs reside in the intermediolateral cell column (IML) of thoracolumbar spinal cord segments T1-L2 (McLachlan and Oldfield, 1981; Oldfield and McLachlan, 1981; Anderson et al., 1989)”. In light of the absense of experimental data on the level of the spinal cord that this connection arises from and suggested by the knowledge expert we decided to include all the sympathetic spinal cord from T1-L2." ; + ilxtr:genLabel "Rattus norvegicus female lumbar subsegment of spinal cord thoracic subsegment of spinal cord (with-axon-in splanchnic nerve) (with-axon-presynaptic-element-in suprarenal ganglion) (projecting-onto ilxtr:sparc-nlp/femrep/35) Sympathetic Pre-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation ; + ilxtr:neuronPartialOrder ( + "blank" + ( + UBERON:0007715 + ( + UBERON:0003715 + ( + ILX:0794764 ) ) ) + ( + UBERON:0007716 + ( + UBERON:0003715 ) ) ) ; + ilxtr:reference "Sangari (2014) https://doi.org/10.1016/j.jasi.2014.04.008" . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-post ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0793832 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0003984 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0794764 ] ] ) ] ; + rdfs:label "suprarenal ganglion to uterine tube infundibulum via ovarian plexus nerve" ; + ilxtr:genLabel "Rattus norvegicus female suprarenal ganglion (with-axon-in ovarian nerve plexus) (with-axon-presynaptic-element-in uterine tube infundibulum) Sympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation ; + ilxtr:neuronPartialOrder ( + ILX:0794764 + ( + ILX:0793832 + ( + UBERON:0003984 ) ) ) ; + ilxtr:reference "Serghini (1997) http://dx.doi.org/10.1016/S0165-1838(97)00091-X" . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-pre ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0016508 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0739295 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0789862 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002262 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0005479 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0006465 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0006466 ] ] ) ] ; + rdfs:label "T9-T10 spinal cord to paravertebral sympathetic chain of T12-L1 or celiac ganglion or superior mesenteric ganglion via white rami communicantes" ; + ilxtr:curatorNote "Originally the population had as via \"splanchnic nerve\" but considering it is a communication between spinal cord and sympathetic chain \"white rami communicantes\" is representing the route more appropriately." ; + ilxtr:genLabel "Rattus norvegicus female T10 segment of thoracic spinal cord T9 segment of thoracic spinal cord (with-axon-in pelvic ganglion) (with-axon-presynaptic-element-in First lumbar ganglion Thirteenth thoracic ganglion celiac ganglion superior mesenteric ganglion) (projecting-onto ilxtr:sparc-nlp/femrep/37 ilxtr:sparc-nlp/femrep/38) Sympathetic Pre-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation , + , + , + ; + ilxtr:neuronPartialOrder ( + "blank" + ( + UBERON:0006465 + ( + UBERON:0016508 + ( + ILX:0739295 ) + ( + ILX:0789862 ) + ( + UBERON:0002262 ) + ( + UBERON:0005479 ) ) ) + ( + UBERON:0006466 + ( + UBERON:0016508 ) ) ) ; + ilxtr:reference "Gerendai (2000) https://doi.org/10.1016/S0165-1838(00)00071-0 , Gerendai (1998) https://doi.org/10.1159/000054372 , Klein (1988) https://doi.org/10.1016/0304-3940(88)90354-0 , Pastelín (2017) http://dx.doi.org/10.1186/s13048-017-0311-x" ; + ilxtr:sentenceNumber "Addition 24Feb24" . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-post ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0793832 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002119 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0739295 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0789862 ] ] ) ] ; + rdfs:label "paravertebral sympathetic chain of T13-L1 to left ovary via ovarian plexus nerve" ; + ilxtr:curatorNote "There is a laterality difference in the innervation of right and left ovary." ; + ilxtr:genLabel "Rattus norvegicus female First lumbar ganglion Thirteenth thoracic ganglion (with-axon-in ovarian nerve plexus) (with-axon-presynaptic-element-in left ovary) Sympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation , + , + , + , + ; + ilxtr:neuronPartialOrder ( + "blank" + ( + ILX:0739295 + ( + ILX:0793832 + ( + UBERON:0002119 ) ) ) + ( + ILX:0789862 + ( + ILX:0793832 ) ) ) ; + ilxtr:reference "Pastelín (2017) http://dx.doi.org/10.1186/s13048-017-0311-x, Houdeau (1998) http://dx.doi.org/10.1002/(SICI)1096-9861(19980928)399:3%3C403::AID-CNE8%3E3.0.CO;2-4, Morán (2009) http://dx.doi.org/10.1186/1477-7827-7-50 , Uchida (2016) https://doi.org/10.1016/j.autneu.2016.04.003, Klein (1988) https://doi.org/10.1016/0304-3940(88)90354-0" ; + ilxtr:sentenceNumber "Addition 24Feb24" . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-post ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0793822 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002119 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0739295 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0789862 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002262 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0005479 ] ] ) ] ; + rdfs:label "celiac ganglion or superior mesenteric ganglion or paravertebral sympathetic chain of T12-L1 to left ovary via superior ovarian nerve" ; + ilxtr:curatorNote "There is a laterality difference in the innervation of right and left ovary." ; + ilxtr:genLabel "Rattus norvegicus female First lumbar ganglion Thirteenth thoracic ganglion celiac ganglion superior mesenteric ganglion (with-axon-in SON) (with-axon-presynaptic-element-in left ovary) Sympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation , + , + , + ; + ilxtr:neuronPartialOrder ( + "blank" + ( + ILX:0739295 + ( + ILX:0793822 ) ) + ( + ILX:0789862 + ( + ILX:0793822 ) ) + ( + UBERON:0002262 + ( + ILX:0793822 + ( + UBERON:0002119 ) ) ) + ( + UBERON:0005479 + ( + ILX:0793822 ) ) ) ; + ilxtr:reference "Pastelín (2017) http://dx.doi.org/10.1186/s13048-017-0311-x, Morán (2009) http://dx.doi.org/10.1186/1477-7827-7-50 , Uchida (2016) https://doi.org/10.1016/j.autneu.2016.04.003 , Klein (1988) https://doi.org/10.1016/0304-3940(88)90354-0 " ; + ilxtr:sentenceNumber "Addition 24Feb24" . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-pre ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0003715 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0739295 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0789862 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002262 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0005479 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0006465 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0006466 ] ] ) ] ; + rdfs:label "T9-T10 spinal cord to celiac ganglion or superior mesenteric ganglion or paravertebral sympathetic chain of T12-L1 via splanchnic nerve" ; + ilxtr:genLabel "Rattus norvegicus female T10 segment of thoracic spinal cord T9 segment of thoracic spinal cord (with-axon-in splanchnic nerve) (with-axon-presynaptic-element-in First lumbar ganglion Thirteenth thoracic ganglion celiac ganglion superior mesenteric ganglion) (projecting-onto ilxtr:sparc-nlp/femrep/40) Sympathetic Pre-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation , + , + ; + ilxtr:neuronPartialOrder ( + "blank" + ( + UBERON:0006465 + ( + UBERON:0003715 + ( + ILX:0739295 ) + ( + ILX:0789862 ) + ( + UBERON:0002262 ) + ( + UBERON:0005479 ) ) ) + ( + UBERON:0006466 + ( + UBERON:0003715 ) ) ) ; + ilxtr:reference "Gerendai (2000) https://doi.org/10.1016/S0165-1838(00)00071-0, Pastelín (2017) http://dx.doi.org/10.1186/s13048-017-0311-x, Klein (1988) https://doi.org/10.1016/0304-3940(88)90354-0" ; + ilxtr:sentenceNumber "Addition 24Feb24" . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-post ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0793832 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002118 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0739295 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0789862 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002262 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0005479 ] ] ) ] ; + rdfs:label "celiac ganglion or superior mesenteric ganglion or paravertebral sympathetic chain of T13-L1 to right ovary via ovarian plexus nerve" ; + ilxtr:curatorNote "There is a laterality difference in the innervation of right and left ovary." ; + ilxtr:genLabel "Rattus norvegicus female First lumbar ganglion Thirteenth thoracic ganglion celiac ganglion superior mesenteric ganglion (with-axon-in ovarian nerve plexus) (with-axon-presynaptic-element-in right ovary) Sympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation , + , + ; + ilxtr:neuronPartialOrder ( + "blank" + ( + ILX:0739295 + ( + ILX:0793832 ) ) + ( + ILX:0789862 + ( + ILX:0793832 ) ) + ( + UBERON:0002262 + ( + ILX:0793832 + ( + UBERON:0002118 ) ) ) + ( + UBERON:0005479 + ( + ILX:0793832 ) ) ) ; + ilxtr:reference "Pastelín (2017) http://dx.doi.org/10.1186/s13048-017-0311-x, Houdeau (1998) http://dx.doi.org/10.1002/(SICI)1096-9861(19980928)399:3%3C403::AID-CNE8%3E3.0.CO;2-4, Klein (1988) https://doi.org/10.1016/0304-3940(88)90354-0" ; + ilxtr:sentenceNumber "Addition 24Feb24" . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-pre ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0016508 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0786933 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0788315 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0790472 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0007715 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0007716 ] ] ) ] ; + rdfs:label "T1-L2 spinal cord to paravertebral sympathetic chain of L2-L4 via white rami communicantes" ; + ilxtr:curatorNote "In light of the absense of experimental data on the level of the spinal cord that this connection arises from and suggested by the knowledge expert we decided to include all the sympathetic spinal cord from T1-L2." ; + ilxtr:genLabel "Rattus norvegicus female lumbar subsegment of spinal cord thoracic subsegment of spinal cord (with-axon-in pelvic ganglion) (with-axon-presynaptic-element-in Fourth lumbar ganglion Second lumbar ganglion Third lumbar ganglion) (projecting-onto ilxtr:sparc-nlp/femrep/42 ilxtr:sparc-nlp/femrep/43 ilxtr:sparc-nlp/femrep/44) Sympathetic Pre-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation ; + ilxtr:neuronPartialOrder ( + "blank" + ( + UBERON:0007715 + ( + UBERON:0016508 + ( + ILX:0786933 ) + ( + ILX:0788315 ) + ( + ILX:0790472 ) ) ) + ( + UBERON:0007716 + ( + UBERON:0016508 ) ) ) ; + ilxtr:reference "Houdeau (1998) http://dx.doi.org/10.1002/(SICI)1096-9861(19980928)399:3%3C403::AID-CNE8%3E3.0.CO;2-4" . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-post ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0003715 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0005303 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0794768 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0786933 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0788315 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0790472 ] ] ) ] ; + rdfs:label "paravertebral sympathetic chain of L2-L4 to smooth muscle of the lower uterus via splanchnic nerve via hypogastric nerve" ; + ilxtr:genLabel "Rattus norvegicus female Fourth lumbar ganglion Second lumbar ganglion Third lumbar ganglion (with-axons-in hypogastric nerve splanchnic nerve) (with-axon-presynaptic-element-in smooth muscle of the lower uterus) Sympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation , + , + ; + ilxtr:neuronPartialOrder ( + "blank" + ( + ILX:0786933 + ( + UBERON:0003715 + ( + UBERON:0005303 + ( + ILX:0794768 ) ) ) ) + ( + ILX:0788315 + ( + UBERON:0003715 ) ) + ( + ILX:0790472 + ( + UBERON:0003715 ) ) ) ; + ilxtr:reference "Sato (1996) https://doi.org/10.1016/0165-1838(96)00019-7 , Serghini (1997) https://doi.org/10.1016/S0165-1838(97)00091-X , Houdeau (1998) http://dx.doi.org/10.1002/(SICI)1096-9861(19980928)399:3%3C403::AID-CNE8%3E3.0.CO;2-4 " . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-post ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0003715 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0005303 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0794766 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0786933 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0788315 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0790472 ] ] ) ] ; + rdfs:label "paravertebral sympathetic chain of L2-L4 to blood vessel of the lower uterus via splanchnic nerve via hypogastric nerve" ; + ilxtr:curatorNote "IZ: I changed the original destination \"lower uterine blood vessel of the myometrium or endometrium\" to \"blood vessel of the lower uterus\" that covers the vasculature of the upper uterine segment." ; + ilxtr:genLabel "Rattus norvegicus female Fourth lumbar ganglion Second lumbar ganglion Third lumbar ganglion (with-axons-in hypogastric nerve splanchnic nerve) (with-axon-presynaptic-element-in blood vessel of the lower uterus) Sympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation ; + ilxtr:neuronPartialOrder ( + "blank" + ( + ILX:0786933 + ( + UBERON:0003715 + ( + UBERON:0005303 + ( + ILX:0794766 ) ) ) ) + ( + ILX:0788315 + ( + UBERON:0003715 ) ) + ( + ILX:0790472 + ( + UBERON:0003715 ) ) ) ; + ilxtr:reference "Sato (1996) https://doi.org/10.1016/0165-1838(96)00019-7" . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-post ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0003715 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0005303 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0000002 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0786933 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0788315 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0790472 ] ] ) ] ; + rdfs:label "paravertebral sympathetic chain of L2-L4 to uterine cervix via splanchnic nerve via hypogastric nerve" ; + ilxtr:genLabel "Rattus norvegicus female Fourth lumbar ganglion Second lumbar ganglion Third lumbar ganglion (with-axons-in hypogastric nerve splanchnic nerve) (with-axon-presynaptic-element-in uterine cervix) Sympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation ; + ilxtr:neuronPartialOrder ( + "blank" + ( + ILX:0786933 + ( + UBERON:0003715 + ( + UBERON:0000002 ) ) + ( + UBERON:0005303 + ( + UBERON:0000002 ) ) ) + ( + ILX:0788315 + ( + UBERON:0003715 ) + ( + UBERON:0005303 ) ) + ( + ILX:0790472 + ( + UBERON:0003715 ) + ( + UBERON:0005303 ) ) ) ; + ilxtr:reference "Serghini (1997) https://doi.org/10.1016/S0165-1838(97)00091-X" . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-para-pre ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0018675 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0793823 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0793877 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0793878 ] ] ) ] ; + rdfs:label "intermediolateral nucleus of L6-S1 to major pelvic ganglion via pelvic splanchnic nerve" ; + ilxtr:genLabel "Rattus norvegicus female Intermediolateral nucleus of first sacral segment Intermediolateral nucleus of sixth lumbar segment (with-axon-in pelvic splanchnic nerve) (with-axon-presynaptic-element-in MPG) (projecting-onto ilxtr:sparc-nlp/femrep/53 ilxtr:sparc-nlp/femrep/54 ilxtr:sparc-nlp/femrep/55 ilxtr:sparc-nlp/femrep/56) Parasympathetic Pre-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation , + ; + ilxtr:neuronPartialOrder ( + "blank" + ( + ILX:0793877 + ( + UBERON:0018675 + ( + ILX:0793823 ) ) ) + ( + ILX:0793878 + ( + UBERON:0018675 ) ) ) ; + ilxtr:reference "Papka (1995) https://doi.org/10.1002/ar.10924104133, Collins (1999) https://doi.org/10.1016/S0306-4522(99)00396-6" . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-para-post ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0011929 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0794737 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0793823 ] ] ) ] ; + rdfs:label "major pelvic ganglion to uterine blood vessels via postganglionic nerve" ; + ilxtr:genLabel "Rattus norvegicus female MPG (with-axon-in postganglionic parasympathetic fiber) (with-axon-presynaptic-element-in blood vessel of the uterus) Parasympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation , + , + , + , + ; + ilxtr:neuronPartialOrder ( + ILX:0793823 + ( + UBERON:0011929 + ( + ILX:0794737 ) ) ) ; + ilxtr:reference "Sato (1996) https://doi.org/10.1016/0165-1838(96)00019-7, Gnanamanickam (2011) https://doi.org/10.1002/cne.22515 , Brauer (2015) https://doi.org/10.1016/j.autneu.2014.11.009 , Garfield (1986) https://doi.org/10.1152/ajpcell.1986.251.1.C41 , Papka (1999) http://dx.doi.org/10.1007/s004410051290" . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-para-post ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0011929 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0001296 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0793823 ] ] ) ] ; + rdfs:label "major pelvic ganglion to myometrium via postganglionic nerve" ; + ilxtr:genLabel "Rattus norvegicus female MPG (with-axon-in postganglionic parasympathetic fiber) (with-axon-presynaptic-element-in myometrium) Parasympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation , + , + , + , + ; + ilxtr:neuronPartialOrder ( + ILX:0793823 + ( + UBERON:0011929 + ( + UBERON:0001296 ) ) ) ; + ilxtr:reference "Sato (1996) https://doi.org/10.1016/0165-1838(96)00019-7, Gnanamanickam (2011) https://doi.org/10.1002/cne.22515 , Brauer (2015) https://doi.org/10.1016/j.autneu.2014.11.009 , Garfield (1986) https://doi.org/10.1152/ajpcell.1986.251.1.C41 , Papka (1999) http://dx.doi.org/10.1007/s004410051290" . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-para-post ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0011929 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0001295 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0793823 ] ] ) ] ; + rdfs:label "major pelvic ganglion to the uterine endometrium via postganglionic nerve" ; + ilxtr:genLabel "Rattus norvegicus female MPG (with-axon-in postganglionic parasympathetic fiber) (with-axon-presynaptic-element-in endometrium) Parasympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation , + , + , + , + ; + ilxtr:neuronPartialOrder ( + ILX:0793823 + ( + UBERON:0011929 + ( + UBERON:0001295 ) ) ) ; + ilxtr:reference "Sato (1996) https://doi.org/10.1016/0165-1838(96)00019-7, Gnanamanickam (2011) https://doi.org/10.1002/cne.22515 , Brauer (2015) https://doi.org/10.1016/j.autneu.2014.11.009 , Garfield (1986) https://doi.org/10.1152/ajpcell.1986.251.1.C41 , Papka (1999) http://dx.doi.org/10.1007/s004410051290" . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-para-post ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0011929 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0000002 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0793823 ] ] ) ] ; + rdfs:label "major pelvic ganglion to uterine cervix via postganglionic nerve" ; + ilxtr:genLabel "Rattus norvegicus female MPG (with-axon-in postganglionic parasympathetic fiber) (with-axon-presynaptic-element-in uterine cervix) Parasympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation , + ; + ilxtr:neuronPartialOrder ( + ILX:0793823 + ( + UBERON:0011929 + ( + UBERON:0000002 ) ) ) ; + ilxtr:reference "Papka (1999) http://dx.doi.org/10.1007/s004410051290, Brauer (2015) https://doi.org/10.1016/j.autneu.2014.11.009" . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002261 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0005303 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0793357 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0006448 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0006449 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0006450 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0006451 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonSensorySubcellularElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0794769 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasCircuitRolePhenotype ; + owl:someValuesFrom ilxtr:SensoryPhenotype ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0793359 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002856 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002857 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002858 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0003943 ] ] ) ] ; + rdfs:label "T13-L4 dorsal root ganglion with axon sensory terminal in upper uterine segment via hypogastric nerve with axon terminal in T13-L4 spinal cord via dorsal root of spinal cord" ; + ilxtr:genLabel "Rattus norvegicus female first lumbar dorsal root ganglion fourth lumbar dorsal root ganglion second lumbar dorsal root ganglion third lumbar dorsal root ganglion thirteenth thoracic dorsal root ganglion (with-axons-in dorsal root of spinal cord hypogastric nerve) (with-axon-presynaptic-element-in L1 segment of lumbar spinal cord L2 segment of lumbar spinal cord L3 segment of lumbar spinal cord L4 segment of lumbar spinal cord Thirteenth thoracic spinal cord segment) sensory neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation , + , + , + , + ; + ilxtr:neuronPartialOrder ( + ILX:0794769 + ( + UBERON:0002261 + ( + ILX:0793359 + ( + ILX:0793357 ) + ( + UBERON:0006448 ) + ( + UBERON:0006449 ) + ( + UBERON:0006450 ) + ( + UBERON:0006451 ) ) + ( + UBERON:0002856 + ( + ILX:0793357 ) + ( + UBERON:0006448 ) + ( + UBERON:0006449 ) + ( + UBERON:0006450 ) + ( + UBERON:0006451 ) ) + ( + UBERON:0002857 + ( + ILX:0793357 ) + ( + UBERON:0006448 ) + ( + UBERON:0006449 ) + ( + UBERON:0006450 ) + ( + UBERON:0006451 ) ) + ( + UBERON:0002858 + ( + ILX:0793357 ) + ( + UBERON:0006448 ) + ( + UBERON:0006449 ) + ( + UBERON:0006450 ) + ( + UBERON:0006451 ) ) + ( + UBERON:0003943 + ( + ILX:0793357 ) + ( + UBERON:0006448 ) + ( + UBERON:0006449 ) + ( + UBERON:0006450 ) + ( + UBERON:0006451 ) ) ) + ( + UBERON:0005303 + ( + ILX:0793359 ) + ( + UBERON:0002856 ) + ( + UBERON:0002857 ) + ( + UBERON:0002858 ) + ( + UBERON:0003943 ) ) ) ; + ilxtr:reference "Ortega-Villalobos (1990) https://doi.org/10.1016/0361-9230(90)90221-K , Brauer (2015) https://doi.org/10.1016/j.autneu.2014.11.009 , Komisaruk (1996) https://doi.org/10.1016/0006-8993(95)01312-1 , Collins (1999) http://dx.doi.org/10.1007/s004410051211 , Ghatei (1985) https://doi.org/10.1016/0196-9781(85)90306-7" . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002261 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0005303 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0793357 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0006448 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0006449 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0006450 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0006451 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonSensorySubcellularElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0000992 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasCircuitRolePhenotype ; + owl:someValuesFrom ilxtr:SensoryPhenotype ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0793359 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002856 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002857 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002858 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0003943 ] ] ) ] ; + rdfs:label "T13-L4 dorsal root ganglion with axon sensory terminal in ovary via hypogastric nerve with axon terminal in T13-L4 spinal cord via dorsal root of spinal cord" ; + ilxtr:genLabel "Rattus norvegicus female first lumbar dorsal root ganglion fourth lumbar dorsal root ganglion second lumbar dorsal root ganglion third lumbar dorsal root ganglion thirteenth thoracic dorsal root ganglion (with-axons-in dorsal root of spinal cord hypogastric nerve) (with-axon-presynaptic-element-in L1 segment of lumbar spinal cord L2 segment of lumbar spinal cord L3 segment of lumbar spinal cord L4 segment of lumbar spinal cord Thirteenth thoracic spinal cord segment) sensory neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation , + , + , + , + ; + ilxtr:neuronPartialOrder ( + UBERON:0000992 + ( + UBERON:0002261 + ( + ILX:0793359 + ( + ILX:0793357 ) + ( + UBERON:0006448 ) + ( + UBERON:0006449 ) + ( + UBERON:0006450 ) + ( + UBERON:0006451 ) ) + ( + UBERON:0002856 + ( + ILX:0793357 ) + ( + UBERON:0006448 ) + ( + UBERON:0006449 ) + ( + UBERON:0006450 ) + ( + UBERON:0006451 ) ) + ( + UBERON:0002857 + ( + ILX:0793357 ) + ( + UBERON:0006448 ) + ( + UBERON:0006449 ) + ( + UBERON:0006450 ) + ( + UBERON:0006451 ) ) + ( + UBERON:0002858 + ( + ILX:0793357 ) + ( + UBERON:0006448 ) + ( + UBERON:0006449 ) + ( + UBERON:0006450 ) + ( + UBERON:0006451 ) ) + ( + UBERON:0003943 + ( + ILX:0793357 ) + ( + UBERON:0006448 ) + ( + UBERON:0006449 ) + ( + UBERON:0006450 ) + ( + UBERON:0006451 ) ) ) + ( + UBERON:0005303 + ( + ILX:0793359 ) + ( + UBERON:0002856 ) + ( + UBERON:0002857 ) + ( + UBERON:0002858 ) + ( + UBERON:0003943 ) ) ) ; + ilxtr:reference "Ortega-Villalobos (1990) https://doi.org/10.1016/0361-9230(90)90221-K , Brauer (2015) https://doi.org/10.1016/j.autneu.2014.11.009 , Komisaruk (1996) https://doi.org/10.1016/0006-8993(95)01312-1 , Collins (1999) http://dx.doi.org/10.1007/s004410051211 , Ghatei (1985) https://doi.org/10.1016/0196-9781(85)90306-7" . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002261 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0018675 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0738432 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0006460 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0006461 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonSensorySubcellularElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0794770 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasCircuitRolePhenotype ; + owl:someValuesFrom ilxtr:SensoryPhenotype ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0793360 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002860 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002861 ] ] ) ] ; + rdfs:label "L6-S2 dorsal root ganglion with axon sensory terminal in lower uterine segment via pelvic nerve with axon terminal in L6-S2 spinal cord via dorsal root of spinal cord" ; + ilxtr:genLabel "Rattus norvegicus female first sacral dorsal root ganglion second sacral dorsal root ganglion sixth lumbar dorsal root ganglion (with-axons-in dorsal root of spinal cord pelvic splanchnic nerve) (with-axon-presynaptic-element-in L6 S1 segment of sacral spinal cord S2 segment of sacral spinal cord) sensory neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation , + , + , + , + ; + ilxtr:neuronPartialOrder ( + ILX:0794770 + ( + UBERON:0002261 + ( + ILX:0793360 + ( + ILX:0738432 ) + ( + UBERON:0006460 ) + ( + UBERON:0006461 ) ) + ( + UBERON:0002860 + ( + ILX:0738432 ) + ( + UBERON:0006460 ) + ( + UBERON:0006461 ) ) + ( + UBERON:0002861 + ( + ILX:0738432 ) + ( + UBERON:0006460 ) + ( + UBERON:0006461 ) ) ) + ( + UBERON:0018675 + ( + ILX:0793360 ) + ( + UBERON:0002860 ) + ( + UBERON:0002861 ) ) ) ; + ilxtr:reference "Ortega-Villalobos (1990) https://doi.org/10.1016/0361-9230(90)90221-K , Brauer (2015) https://doi.org/10.1016/j.autneu.2014.11.009 , Komisaruk (1996) https://doi.org/10.1016/0006-8993(95)01312-1 , Collins (1999) http://dx.doi.org/10.1007/s004410051211 , Ghatei (1985) https://doi.org/10.1016/0196-9781(85)90306-7" . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002261 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0018675 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0738432 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0006460 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0006461 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonSensorySubcellularElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0000002 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasCircuitRolePhenotype ; + owl:someValuesFrom ilxtr:SensoryPhenotype ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0793360 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002860 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002861 ] ] ) ] ; + rdfs:label "L6-S2 dorsal root ganglion with axon sensory terminal in uterine cervix via pelvic nerve with axon terminal in L6-S2 spinal cord via dorsal root of spinal cord" ; + ilxtr:genLabel "Rattus norvegicus female first sacral dorsal root ganglion second sacral dorsal root ganglion sixth lumbar dorsal root ganglion (with-axons-in dorsal root of spinal cord pelvic splanchnic nerve) (with-axon-presynaptic-element-in L6 S1 segment of sacral spinal cord S2 segment of sacral spinal cord) sensory neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation , + , + , + , + ; + ilxtr:neuronPartialOrder ( + UBERON:0000002 + ( + UBERON:0002261 + ( + ILX:0793360 + ( + ILX:0738432 ) + ( + UBERON:0006460 ) + ( + UBERON:0006461 ) ) + ( + UBERON:0002860 + ( + ILX:0738432 ) + ( + UBERON:0006460 ) + ( + UBERON:0006461 ) ) + ( + UBERON:0002861 + ( + ILX:0738432 ) + ( + UBERON:0006460 ) + ( + UBERON:0006461 ) ) ) + ( + UBERON:0018675 + ( + ILX:0793360 ) + ( + UBERON:0002860 ) + ( + UBERON:0002861 ) ) ) ; + ilxtr:reference "Ortega-Villalobos (1990) https://doi.org/10.1016/0361-9230(90)90221-K , Brauer (2015) https://doi.org/10.1016/j.autneu.2014.11.009 , Komisaruk (1996) https://doi.org/10.1016/0006-8993(95)01312-1 , Collins (1999) http://dx.doi.org/10.1007/s004410051211 , Ghatei (1985) https://doi.org/10.1016/0196-9781(85)90306-7" . + + a owl:Class ; + owl:equivalentClass [ a owl:Class ; + owl:intersectionOf ( + ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0001759 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0009050 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonSensorySubcellularElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0000002 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonSensorySubcellularElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0000995 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasCircuitRolePhenotype ; + owl:someValuesFrom ilxtr:SensoryPhenotype ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:10116 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasSomaLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0005363 ] ] ) ] ; + rdfs:label "nodose ganglion with axon sensory terminal in uterus or uterine cervix via abdominal vagal nerve with axon terminal in nucleus of the tractus solitarius via vagus nerve" ; + ilxtr:genLabel "Rattus norvegicus female inferior vagus X ganglion (with-axon-in 10n) (with-axon-presynaptic-element-in nucleus of solitary tract) sensory neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system rat" ; + ilxtr:literatureCitation , + , + , + , + ; + ilxtr:neuronPartialOrder ( + "blank" + ( + UBERON:0000002 + ( + UBERON:0001759 + ( + UBERON:0005363 + ( + UBERON:0009050 ) ) + ( + UBERON:0005363 ) ) + ( + UBERON:0001759 ) ) + ( + UBERON:0000995 + ( + UBERON:0001759 ) + ( + UBERON:0001759 ) ) ) ; + ilxtr:reference "Ortega-Villalobos (1990) https://doi.org/10.1016/0361-9230(90)90221-K , Brauer (2015) https://doi.org/10.1016/j.autneu.2014.11.009 , Komisaruk (1996) https://doi.org/10.1016/0006-8993(95)01312-1 , Collins (1999) http://dx.doi.org/10.1007/s004410051211 , Ghatei (1985) https://doi.org/10.1016/0196-9781(85)90306-7" . + a owl:Class ; owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( @@ -56,6 +1935,18 @@ [ a owl:Restriction ; owl:onProperty ilxtr:hasForwardConnectionPhenotype ; owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] [ a owl:Restriction ; owl:onProperty ilxtr:hasForwardConnectionPhenotype ; owl:someValuesFrom ] @@ -84,8 +1975,8 @@ owl:someValuesFrom UBERON:0006468 ] ] ) ] ; rdfs:label "T10-L1 spinal cord to pelvic ganglion via superior hypogastric plexus via hypogastric nerve via inferior hypogastric plexus" ; ilxtr:curatorNote "Originally for many sympathetic and parasympethetic I had destination of preganglionic fibers and origin of postganglionic fibers the \"uterovaginal plexus\" as the literature was suggesting. The plexus is an extension of the inferior hypogastric plexus. I asked Caroline A Cobine if she knew a ganglion of the uterovaginal plexus so we add it as a synapse point. Her suggestion was to replace the plexus with \"pelvic ganglion\" and ass uterovaginal plexus as the postganglionic fiber leading to the end organ: \"I think that the uterovaginal plexus is likely itself to be the postganglionic nerve. Extending out from the inferior hypogastric plexus which is synonymous with the pelvic ganglion.\". This comment applies to all statements here that has \"pelvic ganglion\" and \"uterovaginal pelxus\"." ; - ilxtr:genLabel "Homo sapiens female L1 segment of lumbar spinal cord T10 segment of thoracic spinal cord T11 segment of thoracic spinal cord T12 segment of thoracic spinal cord (with-axons-in hypogastric nerve inferior hypogastric nerve plexus superior hypogastric nerve plexus) (with-axon-presynaptic-element-in pelvic ganglion) (projecting-onto ilxtr:sparc-nlp/femrep/67 ilxtr:sparc-nlp/femrep/72) Sympathetic Pre-Ganglionic neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female L1 segment of lumbar spinal cord T10 segment of thoracic spinal cord T11 segment of thoracic spinal cord T12 segment of thoracic spinal cord (with-axons-in hypogastric nerve inferior hypogastric nerve plexus superior hypogastric nerve plexus) (with-axon-presynaptic-element-in pelvic ganglion) (projecting-onto ilxtr:sparc-nlp/femrep/67 ilxtr:sparc-nlp/femrep/68 ilxtr:sparc-nlp/femrep/69 ilxtr:sparc-nlp/femrep/70 ilxtr:sparc-nlp/femrep/71 ilxtr:sparc-nlp/femrep/72) Sympathetic Pre-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation ; ilxtr:neuronPartialOrder ( "blank" @@ -117,6 +2008,9 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-post ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -131,15 +2025,21 @@ owl:onProperty ilxtr:hasAxonPresynapticElementIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; - owl:someValuesFrom ILX:0735601 ] ] + owl:someValuesFrom UBERON:0001296 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0016508 ] ] ) ] ; rdfs:label "pelvic ganglion to uterine myometrium via uterovaginal plexus via postganglionic nerve" ; - ilxtr:genLabel "pelvic ganglion (with-axons-in postganglionic sympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in myometrium) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female pelvic ganglion (with-axons-in postganglionic sympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in myometrium) Sympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation , , , @@ -151,13 +2051,16 @@ ( UBERON:0011926 ( - ILX:0735601 ) ) ) ) ; + UBERON:0001296 ) ) ) ) ; ilxtr:reference "Thorbert (1979) https://doi.org/10.1016/0002-9378(79)90348-X , Latini (2008) https://pubmed.ncbi.nlm.nih.gov/18677514/ , Jorgensen (1989) https://doi.org/10.1152/ajpendo.1989.257.2.E220 , Marshall https://pubmed.ncbi.nlm.nih.gov/4911145/" . a owl:Class ; owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-post ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -173,14 +2076,20 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0015173 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0016508 ] ] ) ] ; rdfs:label "pelvic ganglion to helicine branch of uterine artery of uterus via uterovaginal plexus via postganglionic nerve" ; - ilxtr:genLabel "pelvic ganglion (with-axons-in postganglionic sympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in helicine branch of uterine artery) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female pelvic ganglion (with-axons-in postganglionic sympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in helicine branch of uterine artery) Sympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation , , , @@ -199,6 +2108,9 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-post ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -214,14 +2126,20 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom ILX:0794731 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0016508 ] ] ) ] ; rdfs:label "pelvic ganglion to smooth muscle of cervix via uterovaginal plexus via postganglionic nerve" ; - ilxtr:genLabel "pelvic ganglion (with-axons-in postganglionic sympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in smooth muscle of the cervix) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female pelvic ganglion (with-axons-in postganglionic sympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in smooth muscle of the cervix) Sympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation ; ilxtr:neuronPartialOrder ( UBERON:0016508 @@ -237,6 +2155,9 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-post ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -252,14 +2173,20 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0002493 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0016508 ] ] ) ] ; rdfs:label "pelvic ganglion to uterine artery of the cervix via uterovaginal plexus via postganglionic nerve" ; - ilxtr:genLabel "pelvic ganglion (with-axons-in postganglionic sympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in uterine artery) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female pelvic ganglion (with-axons-in postganglionic sympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in uterine artery) Sympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation ; ilxtr:neuronPartialOrder ( UBERON:0016508 @@ -275,6 +2202,9 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-post ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -290,14 +2220,20 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0004223 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0016508 ] ] ) ] ; rdfs:label "pelvic ganglion to smooth muscle of vagina via uterovaginal plexus via postganglionic nerve" ; - ilxtr:genLabel "pelvic ganglion (with-axons-in postganglionic sympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in vagina smooth muscle) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female pelvic ganglion (with-axons-in postganglionic sympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in vagina smooth muscle) Sympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation ; ilxtr:neuronPartialOrder ( UBERON:0016508 @@ -313,6 +2249,9 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-post ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -328,14 +2267,20 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom ILX:0794734 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0016508 ] ] ) ] ; rdfs:label "pelvic ganglion to blood vessel of vagina via uterovaginal plexus via postganglionic nerve" ; - ilxtr:genLabel "pelvic ganglion (with-axons-in postganglionic sympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in blood vessel of the vagina) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female pelvic ganglion (with-axons-in postganglionic sympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in blood vessel of the vagina) Sympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation ; ilxtr:neuronPartialOrder ( UBERON:0016508 @@ -351,6 +2296,9 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-pre ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -386,6 +2334,15 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom ILX:0794733 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -412,8 +2369,8 @@ owl:onProperty partOf: ; owl:someValuesFrom UBERON:0006468 ] ] ) ] ; rdfs:label "T10-L2 spinal cord to ovarian ganglion via celiac plexus via superior mesenteric plexus via intermesenteric plexus via superior hypogastric plexus via hypogastric nerve via inferior hypogastric plexus" ; - ilxtr:genLabel "L1 segment of lumbar spinal cord L2 segment of lumbar spinal cord T10 segment of thoracic spinal cord T11 segment of thoracic spinal cord T12 segment of thoracic spinal cord (with-axons-in celiac nerve plexus hypogastric nerve inferior hypogastric nerve plexus intermesenteric plexus superior hypogastric nerve plexus superior mesenteric plexus) (with-axon-presynaptic-element-in ovarian nerve plexus sympathetic ganglion) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female L1 segment of lumbar spinal cord L2 segment of lumbar spinal cord T10 segment of thoracic spinal cord T11 segment of thoracic spinal cord T12 segment of thoracic spinal cord (with-axons-in celiac nerve plexus hypogastric nerve inferior hypogastric nerve plexus intermesenteric plexus superior hypogastric nerve plexus superior mesenteric plexus) (with-axon-presynaptic-element-in ovarian nerve plexus sympathetic ganglion) (projecting-onto ilxtr:sparc-nlp/femrep/74) Sympathetic Pre-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation , , , @@ -458,6 +2415,9 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-post ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -473,14 +2433,20 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0012648 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom ILX:0794733 ] ] ) ] ; rdfs:label "ovarian ganglion to smooth muscle of the isthmus or ampulla of the Fallopian tube via postganglionic nerve" ; - ilxtr:genLabel "ovarian nerve plexus sympathetic ganglion (with-axon-in postganglionic sympathetic fiber) (with-axon-presynaptic-element-in ampulla of uterine tube smooth muscle of the isthmus of the Fallopian tube) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female ovarian nerve plexus sympathetic ganglion (with-axon-in postganglionic sympathetic fiber) (with-axon-presynaptic-element-in ampulla of uterine tube smooth muscle of the isthmus of the Fallopian tube) Sympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation , , , @@ -499,21 +2465,33 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-pre ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; - owl:someValuesFrom ILX:0726449 ] ] + owl:someValuesFrom UBERON:0018681 ] ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; - owl:someValuesFrom ILX:0729870 ] ] + owl:someValuesFrom UBERON:0018683 ] ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonPresynapticElementIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom ILX:0794730 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -541,8 +2519,8 @@ owl:someValuesFrom UBERON:0006468 ] ] ) ] ; rdfs:label "T10-L2 spinal cord to aorticorenal ganglion via lesser splanchnic nerve or lumbar splanchnic nerves" ; ilxtr:curatorNote "Caroline Cobine corrected the 75 and 76 statements and commented for the 75: \"The spinal levels are from Gray’s Anatomy 40th edition, page 1293\". The statements was corrected a lot by Caroline and it became: \"via lesser splanchnic nerve OR first OR second lumbar splanchnic nerves\". But we can say simply Lumbar splanchnic nerves because the term refers to L1 and L2 only anyways. So we avoid creating extra terms." ; - ilxtr:genLabel "L1 segment of lumbar spinal cord L2 segment of lumbar spinal cord T10 segment of thoracic spinal cord T11 segment of thoracic spinal cord T12 segment of thoracic spinal cord (with-axons-in lesser splanchnic nerve lumbar splanchnic nerve) (with-axon-presynaptic-element-in aorticorenal ganglion) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female L1 segment of lumbar spinal cord L2 segment of lumbar spinal cord T10 segment of thoracic spinal cord T11 segment of thoracic spinal cord T12 segment of thoracic spinal cord (with-axons-in lesser splanchnic nerve lumbar splanchnic nerve) (with-axon-presynaptic-element-in aorticorenal ganglion) (projecting-onto ilxtr:sparc-nlp/femrep/76) Sympathetic Pre-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation , , , @@ -553,43 +2531,97 @@ ( UBERON:0006448 ( - ILX:0726449 + UBERON:0018681 ( ILX:0794730 ) ) ( - ILX:0729870 + UBERON:0018683 ( ILX:0794730 ) ) ) ( UBERON:0006450 ( - ILX:0726449 ) + UBERON:0018681 ) ( - ILX:0729870 ) ) + UBERON:0018683 ) ) ( UBERON:0006466 ( - ILX:0726449 ) + UBERON:0018681 ) ( - ILX:0729870 ) ) + UBERON:0018683 ) ) ( UBERON:0006467 ( - ILX:0726449 ) + UBERON:0018681 ) ( - ILX:0729870 ) ) + UBERON:0018683 ) ) ( UBERON:0006468 ( - ILX:0726449 ) + UBERON:0018681 ) ( - ILX:0729870 ) ) ) ; + UBERON:0018683 ) ) ) ; ilxtr:reference "Sokol (2011) https://doi.org/10.3843/GLOWM.10001 , Helm (1981) https://doi.org/10.1095/biolreprod25.1.227 , Abbas (2019) https://doi.org/10.1016/j.mpaic.2019.04.003 , Marshall https://pubmed.ncbi.nlm.nih.gov/4911145/ , Gray’s Anatomy 40th edition ISBN13:9780702077050" . a owl:Class ; owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-post ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0793832 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0794732 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002013 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002014 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0005303 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0005488 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonLocatedIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0035770 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0012648 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAxonPresynapticElementIn ; + owl:someValuesFrom [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:8410010 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -597,19 +2629,41 @@ owl:someValuesFrom ILX:0794730 ] ] ) ] ; rdfs:label "Aorticorenal ganglion to distal ampulla or fimbriae of the uterine tube via superior mesenteric plexus via intermesenteric plexus via inferior mesenteric plexus via superior hypogastric plexus via hypogastric nerve via inferior hypogastric plexus via ovarian plexus" ; ilxtr:curatorNote "Caroline Cobine corrected the statement and listed all the vias. In the Doc she commented: \"The renal plexus is a subdivision of the intermesenteric plexus (formed by the contribution of the L1 and L2 splanchnic nerves). I ordered these from distal to proximal (organ to originating ganglion), not sure if this is the correct way to do this.\" I corrected the order of the Vias from proximal to distal." ; - ilxtr:genLabel "aorticorenal ganglion neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female aorticorenal ganglion (with-axons-in hypogastric nerve inferior hypogastric nerve plexus inferior mesenteric nerve plexus intermesenteric plexus ovarian nerve plexus superior hypogastric nerve plexus superior mesenteric plexus) (with-axon-presynaptic-element-in ampulla of uterine tube fimbria of uterine tube) Sympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation , , , ; - ilxtr:neuronPartialOrder [ rdf:rest () ] ; + ilxtr:neuronPartialOrder ( + ILX:0794730 + ( + UBERON:0005488 + ( + ILX:0794732 + ( + UBERON:0035770 + ( + UBERON:0002013 + ( + UBERON:0005303 + ( + UBERON:0002014 + ( + ILX:0793832 + ( + UBERON:0012648 ) + ( + UBERON:8410010 ) ) ) ) ) ) ) ) ) ; ilxtr:reference "Sokol (2011) https://doi.org/10.3843/GLOWM.10001 , Helm (1981) https://doi.org/10.1095/biolreprod25.1.227 , Abbas (2019) https://doi.org/10.1016/j.mpaic.2019.04.003 , Marshall https://pubmed.ncbi.nlm.nih.gov/4911145/" . a owl:Class ; owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-pre ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -645,6 +2699,21 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom ILX:0794733 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -656,8 +2725,8 @@ owl:onProperty partOf: ; owl:someValuesFrom UBERON:0006467 ] ] ) ] ; rdfs:label "T10-T11 spinal cord to ovarian ganglion via celiac plexus via superior mesenteric plexus via intermesenteric plexus via superior hypogastric plexus via hypogastric nerve via inferior hypogastric plexus" ; - ilxtr:genLabel "T10 segment of thoracic spinal cord T11 segment of thoracic spinal cord (with-axons-in celiac nerve plexus hypogastric nerve inferior hypogastric nerve plexus intermesenteric plexus superior hypogastric nerve plexus superior mesenteric plexus) (with-axon-presynaptic-element-in ovarian nerve plexus sympathetic ganglion) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female T10 segment of thoracic spinal cord T11 segment of thoracic spinal cord (with-axons-in celiac nerve plexus hypogastric nerve inferior hypogastric nerve plexus intermesenteric plexus superior hypogastric nerve plexus superior mesenteric plexus) (with-axon-presynaptic-element-in ovarian nerve plexus sympathetic ganglion) (projecting-onto ilxtr:sparc-nlp/femrep/78 ilxtr:sparc-nlp/femrep/79 ilxtr:sparc-nlp/femrep/80) Sympathetic Pre-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation , , , @@ -692,6 +2761,9 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-post ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -702,14 +2774,20 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0006960 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom ILX:0794733 ] ] ) ] ; rdfs:label "ovarian ganglion to the ovary stroma via ovarian nerve plexus" ; - ilxtr:genLabel "ovarian nerve plexus sympathetic ganglion (with-axon-in ovarian nerve plexus) (with-axon-presynaptic-element-in ovary stroma) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female ovarian nerve plexus sympathetic ganglion (with-axon-in ovarian nerve plexus) (with-axon-presynaptic-element-in ovary stroma) Sympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation , , , @@ -728,6 +2806,9 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-post ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -738,14 +2819,20 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0001190 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom ILX:0794733 ] ] ) ] ; rdfs:label "ovarian ganglion to the ovarian artery via ovarian nerve plexus" ; - ilxtr:genLabel "ovarian nerve plexus sympathetic ganglion (with-axon-in ovarian nerve plexus) (with-axon-presynaptic-element-in ovarian artery) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female ovarian nerve plexus sympathetic ganglion (with-axon-in ovarian nerve plexus) (with-axon-presynaptic-element-in ovarian artery) Sympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation , , , @@ -764,6 +2851,9 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-post ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -774,6 +2864,12 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0001305 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -781,8 +2877,8 @@ owl:someValuesFrom ILX:0794733 ] ] ) ] ; rdfs:label "ovarian ganglion to ovarian follicle of the ovary via ovarian nerve plexus" ; ilxtr:curatorNote "I added \"ovarian follicle\" because the reference Helm (1981) 10.1095/biolreprod25.1.227 mentions the innervation reaches the endocrine cells and the part of the ovary that acts as endocrine tissue is the ovarian follicle." ; - ilxtr:genLabel "ovarian nerve plexus sympathetic ganglion (with-axon-in ovarian nerve plexus) (with-axon-presynaptic-element-in ovarian follicle) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female ovarian nerve plexus sympathetic ganglion (with-axon-in ovarian nerve plexus) (with-axon-presynaptic-element-in ovarian follicle) Sympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation , , , @@ -801,6 +2897,9 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-pre ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -821,6 +2920,18 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0016508 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -842,8 +2953,8 @@ owl:onProperty partOf: ; owl:someValuesFrom UBERON:0006468 ] ] ) ] ; rdfs:label "T10-L1 spinal cord to pelvic ganglion via superior hypogastric plexus via hypogastric nerve via inferior hypogastric plexus" ; - ilxtr:genLabel "L1 segment of lumbar spinal cord T10 segment of thoracic spinal cord T11 segment of thoracic spinal cord T12 segment of thoracic spinal cord (with-axons-in hypogastric nerve inferior hypogastric nerve plexus superior hypogastric nerve plexus) (with-axon-presynaptic-element-in pelvic ganglion) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female L1 segment of lumbar spinal cord T10 segment of thoracic spinal cord T11 segment of thoracic spinal cord T12 segment of thoracic spinal cord (with-axons-in hypogastric nerve inferior hypogastric nerve plexus superior hypogastric nerve plexus) (with-axon-presynaptic-element-in pelvic ganglion) (projecting-onto ilxtr:sparc-nlp/femrep/82 ilxtr:sparc-nlp/femrep/83) Sympathetic Pre-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation ; ilxtr:neuronPartialOrder ( "blank" @@ -875,6 +2986,9 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-post ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -890,14 +3004,20 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0008323 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0016508 ] ] ) ] ; rdfs:label "pelvic ganglion to dorsal artery of clitoris via uterovaginal plexus via postganglionic nerve" ; - ilxtr:genLabel "pelvic ganglion (with-axons-in postganglionic sympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in dorsal artery of clitoris) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female pelvic ganglion (with-axons-in postganglionic sympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in dorsal artery of clitoris) Sympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation ; ilxtr:neuronPartialOrder ( UBERON:0016508 @@ -913,6 +3033,9 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-sym-post ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -928,14 +3051,20 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0008331 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0016508 ] ] ) ] ; rdfs:label "pelvic ganglion to clitoral smooth muscle via uterovaginal plexus via postganglionic nerve" ; - ilxtr:genLabel "pelvic ganglion (with-axons-in postganglionic sympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in clitoral smooth muscle) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female pelvic ganglion (with-axons-in postganglionic sympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in clitoral smooth muscle) Sympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation ; ilxtr:neuronPartialOrder ( UBERON:0016508 @@ -951,6 +3080,9 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-para-pre ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -966,6 +3098,42 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0016508 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasForwardConnectionPhenotype ; + owl:someValuesFrom ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -982,8 +3150,8 @@ owl:onProperty partOf: ; owl:someValuesFrom ILX:0788777 ] ] ) ] ; rdfs:label "anterior ramus of S2‒S4 spinal cord to pelvic ganglion via pelvic splanchnic nerves via inferior hypogastric plexus" ; - ilxtr:genLabel "Anterior ramus of fourth sacral nerve Anterior ramus of second sacral nerve Anterior ramus of third sacral nerve (with-axons-in inferior hypogastric nerve plexus pelvic splanchnic nerve) (with-axon-presynaptic-element-in pelvic ganglion) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female Anterior ramus of fourth sacral nerve Anterior ramus of second sacral nerve Anterior ramus of third sacral nerve (with-axons-in inferior hypogastric nerve plexus pelvic splanchnic nerve) (with-axon-presynaptic-element-in pelvic ganglion) (projecting-onto ilxtr:sparc-nlp/femrep/85 ilxtr:sparc-nlp/femrep/86 ilxtr:sparc-nlp/femrep/87 ilxtr:sparc-nlp/femrep/88 ilxtr:sparc-nlp/femrep/89 ilxtr:sparc-nlp/femrep/90 ilxtr:sparc-nlp/femrep/91 ilxtr:sparc-nlp/femrep/92 ilxtr:sparc-nlp/femrep/93 ilxtr:sparc-nlp/femrep/94) Parasympathetic Pre-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation , ; ilxtr:neuronPartialOrder ( @@ -1010,6 +3178,9 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-para-post ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -1025,14 +3196,20 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom ILX:0794734 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0016508 ] ] ) ] ; rdfs:label "pelvic ganglion to the blood vessel of the vagina via uterovaginal plexus via postganglionic nerve" ; - ilxtr:genLabel "pelvic ganglion (with-axons-in postganglionic parasympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in blood vessel of the vagina) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female pelvic ganglion (with-axons-in postganglionic parasympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in blood vessel of the vagina) Parasympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation , , ; @@ -1050,6 +3227,9 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-para-post ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -1065,14 +3245,20 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0001344 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0016508 ] ] ) ] ; rdfs:label "pelvic ganglion to the epithelium of the vagina via uterovaginal plexus via postganglionic nerve" ; - ilxtr:genLabel "pelvic ganglion (with-axons-in postganglionic parasympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in epithelium of vagina) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female pelvic ganglion (with-axons-in postganglionic parasympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in epithelium of vagina) Parasympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation , , ; @@ -1090,6 +3276,9 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-para-post ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -1105,14 +3294,20 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0004223 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0016508 ] ] ) ] ; rdfs:label "pelvic ganglion to the smooth muscle of the vagina via uterovaginal plexus via postganglionic nerve" ; - ilxtr:genLabel "pelvic ganglion (with-axons-in postganglionic parasympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in vagina smooth muscle) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female pelvic ganglion (with-axons-in postganglionic parasympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in vagina smooth muscle) Parasympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation , , ; @@ -1130,6 +3325,9 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-para-post ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -1145,14 +3343,20 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom ILX:0794738 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0016508 ] ] ) ] ; rdfs:label "pelvic ganglion to the blood vessel of the cervix via uterovaginal plexus via postganglionic nerve" ; - ilxtr:genLabel "pelvic ganglion (with-axons-in postganglionic parasympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in blood vessel of the cervix) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female pelvic ganglion (with-axons-in postganglionic parasympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in blood vessel of the cervix) Parasympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation , , , @@ -1171,6 +3375,9 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-para-post ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -1186,14 +3393,20 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom ILX:0794731 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0016508 ] ] ) ] ; rdfs:label "pelvic ganglion to the smooth muscle of the cervix via uterovaginal plexus via postganglionic nerve" ; - ilxtr:genLabel "pelvic ganglion (with-axons-in postganglionic parasympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in smooth muscle of the cervix) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female pelvic ganglion (with-axons-in postganglionic parasympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in smooth muscle of the cervix) Parasympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation , , , @@ -1212,6 +3425,9 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-para-post ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -1227,14 +3443,20 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom ILX:0794736 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0016508 ] ] ) ] ; rdfs:label "pelvic ganglion to the blood vessel of the isthmus of Fallopian tube via uterovaginal plexus via postganglionic nerve" ; - ilxtr:genLabel "pelvic ganglion (with-axons-in postganglionic parasympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in blood vessel of the isthmus of the Fallopian tube) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female pelvic ganglion (with-axons-in postganglionic parasympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in blood vessel of the isthmus of the Fallopian tube) Parasympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation , , , @@ -1253,6 +3475,9 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-para-post ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -1268,14 +3493,20 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom ILX:0794735 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0016508 ] ] ) ] ; rdfs:label "pelvic ganglion to the smooth muscle of the isthmus of Fallopian tube via uterovaginal plexus via postganglionic nerve" ; - ilxtr:genLabel "pelvic ganglion (with-axons-in postganglionic parasympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in smooth muscle of the isthmus of the Fallopian tube) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female pelvic ganglion (with-axons-in postganglionic parasympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in smooth muscle of the isthmus of the Fallopian tube) Parasympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation , , , @@ -1294,6 +3525,9 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-para-post ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -1309,14 +3543,20 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom ILX:0794737 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0016508 ] ] ) ] ; rdfs:label "pelvic ganglion to the blood vessel of uterus via uterovaginal plexus via postganglionic nerve" ; - ilxtr:genLabel "pelvic ganglion (with-axons-in postganglionic parasympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in blood vessel of the uterus) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female pelvic ganglion (with-axons-in postganglionic parasympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in blood vessel of the uterus) Parasympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation , , ; @@ -1334,6 +3574,9 @@ owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-para-post ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -1348,15 +3591,21 @@ owl:onProperty ilxtr:hasAxonPresynapticElementIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; - owl:someValuesFrom ILX:0735601 ] ] + owl:someValuesFrom UBERON:0001296 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0016508 ] ] ) ] ; rdfs:label "pelvic ganglion to the uterine myometrium via uterovaginal plexus via postganglionic nerve" ; - ilxtr:genLabel "pelvic ganglion (with-axons-in postganglionic parasympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in myometrium) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female pelvic ganglion (with-axons-in postganglionic parasympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in myometrium) Parasympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation , , ; @@ -1367,13 +3616,16 @@ ( UBERON:0011929 ( - ILX:0735601 ) ) ) ) ; + UBERON:0001296 ) ) ) ) ; ilxtr:reference "Morizaki (1989) https://doi.org/10.1016/0002-9378(89)90126-9 , Aleksandrovych (2019) https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7103609/ , Latini (2008) https://pubmed.ncbi.nlm.nih.gov/18677514/" . a owl:Class ; owl:equivalentClass [ a owl:Class ; owl:intersectionOf ( ilxtr:NeuronSparcNlp + [ a owl:Restriction ; + owl:onProperty ilxtr:hasAnatomicalSystemPhenotype ; + owl:someValuesFrom ilxtr:neuron-phenotype-para-post ] [ a owl:Restriction ; owl:onProperty ilxtr:hasAxonLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -1389,14 +3641,20 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0000992 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0016508 ] ] ) ] ; rdfs:label "pelvic ganglion to the ovary via uterovaginal plexus via postganglionic nerve" ; - ilxtr:genLabel "pelvic ganglion (with-axons-in postganglionic parasympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in ovary) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female pelvic ganglion (with-axons-in postganglionic parasympathetic fiber uterovaginal nerve plexus) (with-axon-presynaptic-element-in ovary) Parasympathetic Post-Ganglionic neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation ; ilxtr:neuronPartialOrder ( UBERON:0016508 @@ -1442,6 +3700,15 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0000996 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasCircuitRolePhenotype ; + owl:someValuesFrom ilxtr:SensoryPhenotype ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -1458,8 +3725,8 @@ owl:onProperty partOf: ; owl:someValuesFrom UBERON:0007713 ] ] ) ] ; rdfs:label "S2-S4 dorsal root ganglia with axon sensory terminal in vagina via pelvic splanchnic nerve with axon terminal in S2-S4 spinal cord via dorsal root of spinal cord" ; - ilxtr:genLabel "fourth sacral spinal ganglion second sacral dorsal root ganglion third sacral dorsal root ganglion (with-axons-in dorsal root of spinal cord pelvic splanchnic nerve) (with-axon-presynaptic-element-in S2 segment of sacral spinal cord S3 segment of sacral spinal cord S4 segment of sacral spinal cord) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female fourth sacral spinal ganglion second sacral dorsal root ganglion third sacral dorsal root ganglion (with-axons-in dorsal root of spinal cord pelvic splanchnic nerve) (with-axon-presynaptic-element-in S2 segment of sacral spinal cord S3 segment of sacral spinal cord S4 segment of sacral spinal cord) sensory neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation ; ilxtr:neuronPartialOrder ( UBERON:0000996 @@ -1533,6 +3800,15 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0000002 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasCircuitRolePhenotype ; + owl:someValuesFrom ilxtr:SensoryPhenotype ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -1549,8 +3825,8 @@ owl:onProperty partOf: ; owl:someValuesFrom UBERON:0007713 ] ] ) ] ; rdfs:label "S2-S4 dorsal root ganglia with axon sensory terminal in uterine cervix via pelvic splanchnic nerve with axon terminal in S2-S4 spinal cord via dorsal root of spinal cord" ; - ilxtr:genLabel "fourth sacral spinal ganglion second sacral dorsal root ganglion third sacral dorsal root ganglion (with-axons-in dorsal root of spinal cord pelvic splanchnic nerve) (with-axon-presynaptic-element-in S2 segment of sacral spinal cord S3 segment of sacral spinal cord S4 segment of sacral spinal cord) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female fourth sacral spinal ganglion second sacral dorsal root ganglion third sacral dorsal root ganglion (with-axons-in dorsal root of spinal cord pelvic splanchnic nerve) (with-axon-presynaptic-element-in S2 segment of sacral spinal cord S3 segment of sacral spinal cord S4 segment of sacral spinal cord) sensory neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation ; ilxtr:neuronPartialOrder ( UBERON:0000002 @@ -1634,6 +3910,15 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0000995 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasCircuitRolePhenotype ; + owl:someValuesFrom ilxtr:SensoryPhenotype ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -1650,8 +3935,8 @@ owl:onProperty partOf: ; owl:someValuesFrom UBERON:0002857 ] ] ) ] ; rdfs:label "T10-L2 dorsal root ganglia with axon sensory terminal in uterus via hypogastric nerve with axon terminal in T10-L2 dorsal root ganglia to T10-L2 spinal cord via dorsal root of spinal cord" ; - ilxtr:genLabel "first lumbar dorsal root ganglion second lumbar dorsal root ganglion tenth thoracic dorsal root ganglion (with-axons-in dorsal root of spinal cord hypogastric nerve) (with-axon-presynaptic-element-in L1 segment of lumbar spinal cord L2 segment of lumbar spinal cord T10 segment of thoracic spinal cord T11 segment of thoracic spinal cord T12 segment of thoracic spinal cord) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female first lumbar dorsal root ganglion second lumbar dorsal root ganglion tenth thoracic dorsal root ganglion (with-axons-in dorsal root of spinal cord hypogastric nerve) (with-axon-presynaptic-element-in L1 segment of lumbar spinal cord L2 segment of lumbar spinal cord T10 segment of thoracic spinal cord T11 segment of thoracic spinal cord T12 segment of thoracic spinal cord) sensory neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation ; ilxtr:neuronPartialOrder ( UBERON:0000995 @@ -1747,6 +4032,15 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0000002 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasCircuitRolePhenotype ; + owl:someValuesFrom ilxtr:SensoryPhenotype ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -1773,8 +4067,8 @@ owl:onProperty partOf: ; owl:someValuesFrom UBERON:0002857 ] ] ) ] ; rdfs:label "T10-L2 dorsal root ganglia with axon sensory terminal in uterine cervix via hypogastric nerve with axon terminal in T10-L2 spinal cord via dorsal root of spinal cord" ; - ilxtr:genLabel "eleventh thoracic dorsal root ganglion first lumbar dorsal root ganglion second lumbar dorsal root ganglion tenth thoracic dorsal root ganglion twelfth thoracic dorsal root ganglion (with-axons-in dorsal root of spinal cord hypogastric nerve) (with-axon-presynaptic-element-in L1 segment of lumbar spinal cord L2 segment of lumbar spinal cord T10 segment of thoracic spinal cord T11 segment of thoracic spinal cord T12 segment of thoracic spinal cord) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female eleventh thoracic dorsal root ganglion first lumbar dorsal root ganglion second lumbar dorsal root ganglion tenth thoracic dorsal root ganglion twelfth thoracic dorsal root ganglion (with-axons-in dorsal root of spinal cord hypogastric nerve) (with-axon-presynaptic-element-in L1 segment of lumbar spinal cord L2 segment of lumbar spinal cord T10 segment of thoracic spinal cord T11 segment of thoracic spinal cord T12 segment of thoracic spinal cord) sensory neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation ; ilxtr:neuronPartialOrder ( UBERON:0000002 @@ -1888,6 +4182,15 @@ owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0002411 ] ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasBiologicalSex ; + owl:someValuesFrom PATO:0000383 ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasCircuitRolePhenotype ; + owl:someValuesFrom ilxtr:SensoryPhenotype ] + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ] [ a owl:Restriction ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; @@ -1904,8 +4207,8 @@ owl:onProperty partOf: ; owl:someValuesFrom UBERON:0007713 ] ] ) ] ; rdfs:label "S2-S4 dorsal root ganglia with axon sensory terminal in clitoris via pudendal nerve with axon terminal in S2-S4 spinal cord via dorsal root of spinal cord" ; - ilxtr:genLabel "fourth sacral spinal ganglion second sacral dorsal root ganglion third sacral dorsal root ganglion (with-axons-in dorsal root of spinal cord pudendal nerve) (with-axon-presynaptic-element-in S2 segment of sacral spinal cord S3 segment of sacral spinal cord S4 segment of sacral spinal cord) neuron (sprcnlp)" ; - ilxtr:inNLPWorkingSet "female reproductive system" ; + ilxtr:genLabel "Homo sapiens female fourth sacral spinal ganglion second sacral dorsal root ganglion third sacral dorsal root ganglion (with-axons-in dorsal root of spinal cord pudendal nerve) (with-axon-presynaptic-element-in S2 segment of sacral spinal cord S3 segment of sacral spinal cord S4 segment of sacral spinal cord) sensory neuron (sprcnlp)" ; + ilxtr:inNLPWorkingSet "female reproductive system human" ; ilxtr:literatureCitation ; ilxtr:neuronPartialOrder ( UBERON:0002411 From a147194f6050d967e62ac501fa7d4881765f4859 Mon Sep 17 00:00:00 2001 From: Tom Gillespie Date: Mon, 4 Mar 2024 10:35:23 -0800 Subject: [PATCH 2/5] neurons apinat simple sheet update ardell species --- ttl/generated/neurons/apinat-simple-sheet.ttl | 162 +++++++++++++++--- 1 file changed, 142 insertions(+), 20 deletions(-) diff --git a/ttl/generated/neurons/apinat-simple-sheet.ttl b/ttl/generated/neurons/apinat-simple-sheet.ttl index 3de53539..ca23f1ec 100644 --- a/ttl/generated/neurons/apinat-simple-sheet.ttl +++ b/ttl/generated/neurons/apinat-simple-sheet.ttl @@ -13,7 +13,7 @@ owl:imports , , ; - prov:wasGeneratedBy . + prov:wasGeneratedBy . ### Classes @@ -28,7 +28,13 @@ ilxtr:neuron-type-aacar-1 a owl:Class ; owl:someValuesFrom UBERON:0009050 ] ] ) ] ; rdfs:subClassOf [ a owl:Restriction ; owl:onProperty ilxtr:hasInstanceInTaxon ; - owl:someValuesFrom NCBITaxon:40674 ] ; + owl:someValuesFrom NCBITaxon:9606 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9615 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9825 ] ; ilxtr:hasOrganTarget UBERON:0001016 . ilxtr:neuron-type-aacar-2i a owl:Class ; @@ -50,7 +56,13 @@ ilxtr:neuron-type-aacar-2i a owl:Class ; owl:someValuesFrom UBERON:0002440 ] ] ) ] ; rdfs:subClassOf [ a owl:Restriction ; owl:onProperty ilxtr:hasInstanceInTaxon ; - owl:someValuesFrom NCBITaxon:40674 ] ; + owl:someValuesFrom NCBITaxon:9606 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9615 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9825 ] ; ilxtr:hasOrganTarget UBERON:0001016 . ilxtr:neuron-type-aacar-2m a owl:Class ; @@ -72,7 +84,13 @@ ilxtr:neuron-type-aacar-2m a owl:Class ; owl:someValuesFrom UBERON:0001990 ] ] ) ] ; rdfs:subClassOf [ a owl:Restriction ; owl:onProperty ilxtr:hasInstanceInTaxon ; - owl:someValuesFrom NCBITaxon:40674 ] ; + owl:someValuesFrom NCBITaxon:9606 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9615 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9825 ] ; ilxtr:hasOrganTarget UBERON:0001016 . ilxtr:neuron-type-aacar-4 a owl:Class ; @@ -128,7 +146,13 @@ ilxtr:neuron-type-aacar-4 a owl:Class ; owl:someValuesFrom UBERON:0002870 ] ] ) ] ; rdfs:subClassOf [ a owl:Restriction ; owl:onProperty ilxtr:hasInstanceInTaxon ; - owl:someValuesFrom NCBITaxon:40674 ] ; + owl:someValuesFrom NCBITaxon:9606 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9615 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9825 ] ; ilxtr:hasOrganTarget UBERON:0000948 . ilxtr:neuron-type-aacar-5 a owl:Class ; @@ -356,7 +380,13 @@ ilxtr:neuron-type-aacar-5 a owl:Class ; owl:someValuesFrom UBERON:0006470 ] ] ) ] ; rdfs:subClassOf [ a owl:Restriction ; owl:onProperty ilxtr:hasInstanceInTaxon ; - owl:someValuesFrom NCBITaxon:40674 ] ; + owl:someValuesFrom NCBITaxon:9606 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9615 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9825 ] ; ilxtr:hasOrganTarget UBERON:0001016 . ilxtr:neuron-type-aacar-6 a owl:Class ; @@ -496,7 +526,13 @@ ilxtr:neuron-type-aacar-6 a owl:Class ; owl:someValuesFrom UBERON:0002440 ] ] ) ] ; rdfs:subClassOf [ a owl:Restriction ; owl:onProperty ilxtr:hasInstanceInTaxon ; - owl:someValuesFrom NCBITaxon:40674 ] ; + owl:someValuesFrom NCBITaxon:9606 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9615 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9825 ] ; ilxtr:hasOrganTarget UBERON:0000948 . ilxtr:neuron-type-aacar-7a a owl:Class ; @@ -528,7 +564,13 @@ ilxtr:neuron-type-aacar-7a a owl:Class ; owl:someValuesFrom ILX:0793555 ] ] ) ] ; rdfs:subClassOf [ a owl:Restriction ; owl:onProperty ilxtr:hasInstanceInTaxon ; - owl:someValuesFrom NCBITaxon:40674 ] ; + owl:someValuesFrom NCBITaxon:9606 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9615 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9825 ] ; ilxtr:hasOrganTarget UBERON:0000948 . ilxtr:neuron-type-aacar-7v a owl:Class ; @@ -560,7 +602,13 @@ ilxtr:neuron-type-aacar-7v a owl:Class ; owl:someValuesFrom ILX:0793556 ] ] ) ] ; rdfs:subClassOf [ a owl:Restriction ; owl:onProperty ilxtr:hasInstanceInTaxon ; - owl:someValuesFrom NCBITaxon:40674 ] ; + owl:someValuesFrom NCBITaxon:9606 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9615 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9825 ] ; ilxtr:hasOrganTarget UBERON:0000948 . ilxtr:neuron-type-aacar-8a a owl:Class ; @@ -592,7 +640,13 @@ ilxtr:neuron-type-aacar-8a a owl:Class ; owl:someValuesFrom ILX:0793555 ] ] ) ] ; rdfs:subClassOf [ a owl:Restriction ; owl:onProperty ilxtr:hasInstanceInTaxon ; - owl:someValuesFrom NCBITaxon:40674 ] ; + owl:someValuesFrom NCBITaxon:9606 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9615 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9825 ] ; ilxtr:hasOrganTarget UBERON:0000948 . ilxtr:neuron-type-aacar-8v a owl:Class ; @@ -624,7 +678,13 @@ ilxtr:neuron-type-aacar-8v a owl:Class ; owl:someValuesFrom ILX:0793556 ] ] ) ] ; rdfs:subClassOf [ a owl:Restriction ; owl:onProperty ilxtr:hasInstanceInTaxon ; - owl:someValuesFrom NCBITaxon:40674 ] ; + owl:someValuesFrom NCBITaxon:9606 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9615 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9825 ] ; ilxtr:hasOrganTarget UBERON:0000948 . ilxtr:neuron-type-aacar-9a a owl:Class ; @@ -661,7 +721,13 @@ ilxtr:neuron-type-aacar-9a a owl:Class ; owl:someValuesFrom ILX:0793555 ] ] ) ] ; rdfs:subClassOf [ a owl:Restriction ; owl:onProperty ilxtr:hasInstanceInTaxon ; - owl:someValuesFrom NCBITaxon:40674 ] ; + owl:someValuesFrom NCBITaxon:9606 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9615 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9825 ] ; ilxtr:hasOrganTarget UBERON:0000948 . ilxtr:neuron-type-aacar-9v a owl:Class ; @@ -698,7 +764,13 @@ ilxtr:neuron-type-aacar-9v a owl:Class ; owl:someValuesFrom ILX:0793556 ] ] ) ] ; rdfs:subClassOf [ a owl:Restriction ; owl:onProperty ilxtr:hasInstanceInTaxon ; - owl:someValuesFrom NCBITaxon:40674 ] ; + owl:someValuesFrom NCBITaxon:9606 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9615 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9825 ] ; ilxtr:hasOrganTarget UBERON:0000948 . ilxtr:neuron-type-aacar-10a a owl:Class ; @@ -736,7 +808,13 @@ ilxtr:neuron-type-aacar-10a a owl:Class ; owl:someValuesFrom ILX:0793555 ] ] ) ] ; rdfs:subClassOf [ a owl:Restriction ; owl:onProperty ilxtr:hasInstanceInTaxon ; - owl:someValuesFrom NCBITaxon:40674 ] ; + owl:someValuesFrom NCBITaxon:9606 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9615 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9825 ] ; ilxtr:hasOrganTarget UBERON:0000948 . ilxtr:neuron-type-aacar-10v a owl:Class ; @@ -774,7 +852,13 @@ ilxtr:neuron-type-aacar-10v a owl:Class ; owl:someValuesFrom ILX:0793556 ] ] ) ] ; rdfs:subClassOf [ a owl:Restriction ; owl:onProperty ilxtr:hasInstanceInTaxon ; - owl:someValuesFrom NCBITaxon:40674 ] ; + owl:someValuesFrom NCBITaxon:9606 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9615 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9825 ] ; ilxtr:hasOrganTarget UBERON:0000948 . ilxtr:neuron-type-aacar-11 a owl:Class ; @@ -846,7 +930,13 @@ ilxtr:neuron-type-aacar-11 a owl:Class ; owl:someValuesFrom UBERON:0005363 ] ] ) ] ; rdfs:subClassOf [ a owl:Restriction ; owl:onProperty ilxtr:hasInstanceInTaxon ; - owl:someValuesFrom NCBITaxon:40674 ] ; + owl:someValuesFrom NCBITaxon:9606 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9615 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9825 ] ; ilxtr:hasOrganTarget UBERON:0001016 . ilxtr:neuron-type-aacar-12 a owl:Class ; @@ -896,7 +986,13 @@ ilxtr:neuron-type-aacar-12 a owl:Class ; owl:someValuesFrom UBERON:0002440 ] ] ) ] ; rdfs:subClassOf [ a owl:Restriction ; owl:onProperty ilxtr:hasInstanceInTaxon ; - owl:someValuesFrom NCBITaxon:40674 ] ; + owl:someValuesFrom NCBITaxon:9606 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9615 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9825 ] ; ilxtr:hasOrganTarget UBERON:0001016 . ilxtr:neuron-type-aacar-13 a owl:Class ; @@ -978,7 +1074,13 @@ ilxtr:neuron-type-aacar-13 a owl:Class ; owl:someValuesFrom UBERON:0007712 ] ] ) ] ; rdfs:subClassOf [ a owl:Restriction ; owl:onProperty ilxtr:hasInstanceInTaxon ; - owl:someValuesFrom NCBITaxon:40674 ] ; + owl:someValuesFrom NCBITaxon:9606 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9615 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9825 ] ; ilxtr:hasOrganTarget UBERON:0000948 . ilxtr:neuron-type-aacar-14 a owl:Class ; @@ -997,7 +1099,17 @@ ilxtr:neuron-type-aacar-14 a owl:Class ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0006469 ] ] ) ] . + owl:someValuesFrom UBERON:0006469 ] ] ) ] ; + rdfs:subClassOf [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9615 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9825 ] ; + ilxtr:hasOrganTarget UBERON:0001016 . ilxtr:neuron-type-aacar-15 a owl:Class ; owl:equivalentClass [ a owl:Class ; @@ -1022,7 +1134,17 @@ ilxtr:neuron-type-aacar-15 a owl:Class ; owl:onProperty ilxtr:hasSomaLocatedIn ; owl:someValuesFrom [ a owl:Restriction ; owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0006493 ] ] ) ] . + owl:someValuesFrom UBERON:0006493 ] ] ) ] ; + rdfs:subClassOf [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9606 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9615 ], + [ a owl:Restriction ; + owl:onProperty ilxtr:hasInstanceInTaxon ; + owl:someValuesFrom NCBITaxon:9825 ] ; + ilxtr:hasOrganTarget UBERON:0001016 . ilxtr:neuron-type-bolew-unbranched-1 a owl:Class ; owl:equivalentClass [ a owl:Class ; From b462fa84b442cb419f1f9fe99c5e5fb6f1f5c605 Mon Sep 17 00:00:00 2001 From: Tom Gillespie Date: Mon, 4 Mar 2024 12:56:54 -0800 Subject: [PATCH 3/5] neurons npo.ttl updated to reflect latest changes --- ttl/npo.ttl | 1144 ++++++++++++++++++++++++++++++++------------------- 1 file changed, 713 insertions(+), 431 deletions(-) diff --git a/ttl/npo.ttl b/ttl/npo.ttl index 6be9fe9e..1d13e6ff 100644 --- a/ttl/npo.ttl +++ b/ttl/npo.ttl @@ -59,7 +59,7 @@ rdfs:label "The Neuron Phenotype Ontology" ; dc:title "The Neuron Phenotype Ontology" ; dc:description "An ontology of neuron types based on the phenotypic dimensions of cells that can be measure experimentally." ; - owl:versionInfo "2023-07-30" ; + owl:versionInfo "2024-03-04" ; dc:contributor "Bernard de Bono - https://orcid.org/0000-0003-0638-5274", "Fahim Imam - https://orcid.org/0000-0003-4752-543X", "Ilias Ziogas - https://orcid.org/0000-0002-9210-2455", @@ -219,11 +219,7 @@ CHEBI:15355 a owl:Class ; "acetylcholine", "ACh", "Azetylcholin", - "C7H16NO2", - "CC(=O)OCC[N+](C)(C)C", "choline acetate", - "InChI=1S/C7H16NO2/c1-7(9)10-6-5-8(2,3)4/h5-6H2,1-4H3/q+1", - "InChIKey=OIPILFWXSMYKGL-UHFFFAOYSA-N", "O-Acetylcholine" ; rdfs:subClassOf CHEBI:35287, CHEBI:47622 . @@ -279,8 +275,7 @@ CHEBI:16015 a owl:Class ; CHEBI:16670 a owl:Class ; rdfs:label "peptide" ; - NIFRID:synonym "C2H4NO2R(C2H2NOR)n", - "Peptid", + NIFRID:synonym "Peptid", "Peptide", "peptides", "peptido", @@ -680,8 +675,7 @@ CHEBI:33566 a owl:Class ; CHEBI:33567 a owl:Class ; rdfs:label "catecholamine" ; - NIFRID:synonym "C8H9NO2R2", - "Catecholamine", + NIFRID:synonym "Catecholamine", "catecholamines" ; rdfs:subClassOf CHEBI:25375, CHEBI:33566 . @@ -867,7 +861,6 @@ CHEBI:33853 a owl:Class ; NIFRID:synonym "a phenol", "arenols", "Aryl alcohol", - "aryl alcohol", "phenols" ; rdfs:subClassOf CHEBI:33659, CHEBI:33822 . @@ -1162,8 +1155,7 @@ CHEBI:83813 a owl:Class ; NIFRID:synonym "canonical amino acid", "canonical amino acids", "proteinogenic amino acids" ; - rdfs:subClassOf CHEBI:33575, - CHEBI:35352 . + rdfs:subClassOf CHEBI:33709 . CHEBI:83820 a owl:Class ; rdfs:label "non-proteinogenic amino acid" ; @@ -1245,12 +1237,56 @@ FMA:5891 a owl:Class ; "Sympathetic chain ganglion" ; rdfs:subClassOf FMA:5890 . +FMA:5898 a owl:Class ; + rdfs:label "Anatomical junction" ; + NIFRID:synonym "Anatomical junction", + "Anatomische Verzweigung", + "Ensambladura anatómica", + "Giunzione anatomica" ; + rdfs:subClassOf FMA:49443 . + +FMA:5901 a owl:Class ; + rdfs:label "Nerve plexus" ; + NIFRID:synonym "Nerve plexus", + "Plexo del nervio" ; + rdfs:subClassOf FMA:5898 . + +FMA:5910 a owl:Class ; + rdfs:label "Autonomic nerve plexus" ; + NIFRID:synonym "Autonomic nerve plexus", + "Autonomic plexus", + "Plexus autonomes", + "Plexus autonomicus", + "Plexus nerveux viscéral", + "Plexus nervosus visceralis", + "Plexus visceralis", + "Visceral nerve plexus", + "Visceral plexus" ; + rdfs:subClassOf FMA:5901 . + +FMA:6472 a owl:Class ; + rdfs:label "Lumbar ganglion" ; + NIFRID:synonym "Lumbar ganglion", + "Lumbar paravertebral ganglion", + "Lumbar sympathetic ganglion" ; + rdfs:subClassOf FMA:5891 . + FMA:6473 a owl:Class ; rdfs:label "Sacral ganglion" ; NIFRID:synonym "Sacral ganglion", "Sacral sympathetic ganglion" ; rdfs:subClassOf FMA:5891 . +FMA:6638 a owl:Class ; + rdfs:label "Ovarian nerve plexus", + "ovarian nerve plexus" ; + NIFRID:synonym "Ovarian nerve plexus", + "Ovarian plexus", + "Plexus nervosus ovaricus", + "Plexus ovaricus", + "Plexus ovarique" ; + rdfs:subClassOf FMA:5910 . + FMA:11195 a owl:Class ; rdfs:label "Segment of neural tree organ" ; NIFRID:synonym "Neural tree organ segment", @@ -1389,7 +1425,8 @@ GO:0097653 a owl:Class ; GO:0110165 a owl:Class ; rdfs:label "cellular anatomical entity" ; - rdfs:subClassOf GO:0005575 . + rdfs:subClassOf GO:0005575, + UBERON:0000061 . GO:1990904 a owl:Class ; rdfs:label "ribonucleoprotein complex" ; @@ -1443,11 +1480,11 @@ ILX:0110100 a owl:Class ; rdfs:subClassOf NLX:143975 . ILX:0738290 a owl:Class ; - rdfs:label "Interganglionic branch of inferior cervical ganglion to middle cervical ganglion" ; + rdfs:label "inferior cervical ganglion - middle cervical ganglion interganglionic segment of the sympathetic chain" ; rdfs:subClassOf UBERON:0000407 . ILX:0738291 a owl:Class ; - rdfs:label "Interganglionic branch of inferior cervical ganglion to first thoracic ganglion" ; + rdfs:label "T1 - inferior cervical ganglion interganglionic segment of the sympathetic chain" ; rdfs:subClassOf UBERON:0000407 . ILX:0738292 a owl:Class ; @@ -1545,6 +1582,11 @@ ILX:0738444 a owl:Class ; NIFRID:synonym "iBAT" ; rdfs:subClassOf UBERON:0001348 . +ILX:0739241 a owl:Class ; + rdfs:label "ansa subclavia" ; + NIFRID:synonym "Subclavian loop" ; + rdfs:subClassOf UBERON:0001990 . + ILX:0739295 a owl:Class ; rdfs:label "Thirteenth thoracic ganglion" ; NIFRID:synonym "T13 sympathetic ganglion", @@ -1702,6 +1744,9 @@ ILX:0784804 a owl:Class ; "anterior root of third thoracic nerve" ; rdfs:subClassOf UBERON:0014617 . +ILX:0785238 a owl:Class ; + rdfs:label "Anterior ramus of second sacral nerve" . + ILX:0785421 a owl:Class ; rdfs:label "ventral root of the first lumbar spinal cord segment" ; NIFRID:synonym "anterior root of first lumbar nerve", @@ -1733,6 +1778,13 @@ ILX:0786141 a owl:Class ; rdfs:label "Fifth thoracic ganglion" ; rdfs:subClassOf UBERON:0000961 . +ILX:0786163 a owl:Class ; + rdfs:label "ventral root of the eighth cervical spinal cord segment" ; + NIFRID:synonym "anterior root of C8", + "Anterior root of eighth cervical nerve", + "anterior root of eighth cervical spinal cord segment" ; + rdfs:subClassOf UBERON:0014634 . + ILX:0786228 a owl:Class ; rdfs:label "Second thoracic ganglion" ; rdfs:subClassOf UBERON:0000961 . @@ -1799,6 +1851,9 @@ ILX:0788315 a owl:Class ; rdfs:label "Third lumbar ganglion" ; rdfs:subClassOf UBERON:0001062 . +ILX:0788532 a owl:Class ; + rdfs:label "Anterior ramus of third sacral nerve" . + ILX:0788536 a owl:Class ; rdfs:label "gray communicating ramus of fourth lumbar nerve" ; NIFRID:synonym "L4 gray ramus", @@ -1811,6 +1866,9 @@ ILX:0788675 a owl:Class ; "anterior root of second lumbar nerve" ; rdfs:subClassOf UBERON:0024382 . +ILX:0788777 a owl:Class ; + rdfs:label "Anterior ramus of fourth sacral nerve" . + ILX:0788945 a owl:Class ; rdfs:label "gray communicating ramus of the fourth thoracic nerve" ; NIFRID:synonym "gray communicating ramus of the fourth intercostal nerve", @@ -1864,7 +1922,7 @@ ILX:0790146 a owl:Class ; ILX:0790472 a owl:Class ; rdfs:label "Fourth lumbar ganglion" ; - rdfs:subClassOf UBERON:0001062 . + rdfs:subClassOf FMA:6472 . ILX:0790482 a owl:Class ; rdfs:label "Seventh thoracic ganglion" ; @@ -1999,11 +2057,6 @@ ILX:0793357 a owl:Class ; "T13 spinal cord segment" ; rdfs:subClassOf UBERON:0001062 . -ILX:0793358 a owl:Class ; - rdfs:label "Sixth lumbar spinal cord segment (duplicate)" ; - NIFRID:synonym "L6 segment", - "L6 spinal cord segment" . - ILX:0793359 a owl:Class ; rdfs:label "thirteenth thoracic dorsal root ganglion" ; NIFRID:synonym "T13 dorsal root ganglia", @@ -2053,10 +2106,13 @@ ILX:0793559 a owl:Class ; rdfs:subClassOf UBERON:0001021 . ILX:0793560 a owl:Class ; - rdfs:label "External laryngeal nerve" ; + rdfs:label "External branch of superior laryngeal nerve" ; NIFRID:synonym "External laryngeal nerve", "external superior laryngeal nerve" ; rdfs:subClassOf UBERON:0001021, + [ a owl:Restriction ; + owl:onProperty ilx.partOf: ; + owl:someValuesFrom UBERON:0001759 ], [ a owl:Restriction ; owl:onProperty ilx.partOf: ; owl:someValuesFrom UBERON:0011326 ] . @@ -2066,6 +2122,9 @@ ILX:0793561 a owl:Class ; NIFRID:synonym "Internal laryngeal nerve", "Internal superior laryngeal nerve" ; rdfs:subClassOf UBERON:0001021, + [ a owl:Restriction ; + owl:onProperty ilx.partOf: ; + owl:someValuesFrom UBERON:0001759 ], [ a owl:Restriction ; owl:onProperty ilx.partOf: ; owl:someValuesFrom UBERON:0011326 ] . @@ -2543,9 +2602,6 @@ ILX:0793834 a owl:Class ; ILX:0793877 a owl:Class ; rdfs:label "Intermediolateral nucleus of sixth lumbar segment" ; rdfs:subClassOf UBERON:0001062, - [ a owl:Restriction ; - owl:onProperty ilx.partOf: ; - owl:someValuesFrom ILX:0738432 ], [ a owl:Restriction ; owl:onProperty ilx.partOf: ; owl:someValuesFrom UBERON:0002175 ] . @@ -2612,6 +2668,70 @@ ILX:0793897 a owl:Class ; rdfs:label "lumbar parasympathetic nucleus" ; rdfs:subClassOf UBERON:0001062 . +ILX:0794730 a owl:Class ; + rdfs:label "aorticorenal ganglion" ; + rdfs:subClassOf UBERON:0001805 . + +ILX:0794731 a owl:Class ; + rdfs:label "smooth muscle of the cervix" ; + rdfs:subClassOf UBERON:0000002 . + +ILX:0794732 a owl:Class ; + rdfs:label "intermesenteric plexus" ; + rdfs:subClassOf UBERON:0001810 . + +ILX:0794733 a owl:Class ; + rdfs:label "ovarian nerve plexus sympathetic ganglion" ; + rdfs:subClassOf FMA:6638 . + +ILX:0794734 a owl:Class ; + rdfs:label "blood vessel of the vagina" ; + rdfs:subClassOf UBERON:0000996 . + +ILX:0794735 a owl:Class ; + rdfs:label "smooth muscle of the isthmus of the Fallopian tube" ; + rdfs:subClassOf UBERON:0016632 . + +ILX:0794736 a owl:Class ; + rdfs:label "blood vessel of the isthmus of the Fallopian tube" ; + rdfs:subClassOf UBERON:0016632 . + +ILX:0794737 a owl:Class ; + rdfs:label "blood vessel of the uterus" ; + rdfs:subClassOf UBERON:0000995 . + +ILX:0794738 a owl:Class ; + rdfs:label "blood vessel of the cervix" ; + rdfs:subClassOf UBERON:0000002 . + +ILX:0794764 a owl:Class ; + rdfs:label "suprarenal ganglion" ; + rdfs:subClassOf UBERON:0000045 . + +ILX:0794765 a owl:Class ; + rdfs:label "blood vessel of the upper uterus" ; + rdfs:subClassOf ILX:0794737 . + +ILX:0794766 a owl:Class ; + rdfs:label "blood vessel of the lower uterus" ; + rdfs:subClassOf ILX:0794737 . + +ILX:0794767 a owl:Class ; + rdfs:label "smooth muscle of the upper uterus" ; + rdfs:subClassOf UBERON:0001296 . + +ILX:0794768 a owl:Class ; + rdfs:label "smooth muscle of the lower uterus" ; + rdfs:subClassOf UBERON:0000995 . + +ILX:0794769 a owl:Class ; + rdfs:label "upper uterine segment" ; + rdfs:subClassOf UBERON:0000995 . + +ILX:0794770 a owl:Class ; + rdfs:label "lower uterine segment" ; + rdfs:subClassOf UBERON:0000995 . + ilxtr:GABAReceptor a owl:Class ; owl:equivalentClass [ a owl:Restriction ; owl:onProperty hasRole: ; @@ -4117,6 +4237,33 @@ NCBITaxon:9685 a owl:Class ; "Felis silvestris catus" ; rdfs:subClassOf NCBITaxon:9682 . +NCBITaxon:9821 a owl:Class ; + rdfs:label "Suidae" ; + NIFRID:synonym "boars", + "pigs" ; + rdfs:subClassOf NCBITaxon:35497 . + +NCBITaxon:9822 a owl:Class ; + rdfs:label "Sus" ; + rdfs:subClassOf NCBITaxon:9821 . + +NCBITaxon:9823 a owl:Class ; + rdfs:label "Pig" ; + NIFRID:synonym "pig", + "pigs", + "Sus scrofa", + "swine", + "wild boar" ; + rdfs:subClassOf NCBITaxon:9822 . + +NCBITaxon:9825 a owl:Class ; + rdfs:label "Domestic Pig" ; + NIFRID:synonym "domestic pig", + "Sus domestica", + "Sus domesticus", + "Sus scrofa domestica" ; + rdfs:subClassOf NCBITaxon:9823 . + NCBITaxon:9989 a owl:Class ; rdfs:label "Rodentia" ; NIFRID:synonym "rodent", @@ -4229,6 +4376,12 @@ NCBITaxon:33554 a owl:Class ; NIFRID:synonym "carnivores" ; rdfs:subClassOf NCBITaxon:314145 . +NCBITaxon:35497 a owl:Class ; + rdfs:label "Suina" ; + NIFRID:synonym "even-toed ungulates", + "Suiformes" ; + rdfs:subClassOf NCBITaxon:91561 . + NCBITaxon:39107 a owl:Class ; rdfs:label "Murinae" ; rdfs:subClassOf NCBITaxon:10066 . @@ -4244,6 +4397,13 @@ NCBITaxon:89593 a owl:Class ; NIFRID:synonym "Craniata" ; rdfs:subClassOf NCBITaxon:7711 . +NCBITaxon:91561 a owl:Class ; + rdfs:label "Artiodactyla" ; + NIFRID:synonym "Cetartiodactyla", + "even-toed ungulates", + "whales, hippos, ruminants, pigs, camels etc." ; + rdfs:subClassOf NCBITaxon:314145 . + NCBITaxon:117570 a owl:Class ; rdfs:label "Teleostomi" ; rdfs:subClassOf NCBITaxon:7776 . @@ -4790,7 +4950,6 @@ owl:Class a owl:Class . PATO:0000001 a owl:Class ; rdfs:label "quality" ; - NIFRID:synonym "trait" ; rdfs:subClassOf BFO:0000020 . PATO:0000047 a owl:Class ; @@ -4834,7 +4993,6 @@ PATO:0001241 a owl:Class ; "monadic quality of an object", "monadic quality of continuant", "multiply inhering quality of a physical entity", - "multiply inhering quality of a physical entity ", "quality of a continuant", "quality of a single physical entity", "quality of an object", @@ -4867,7 +5025,8 @@ PAXRAT:794 a owl:Class ; owl:onProperty ilxtr:delineates ; owl:someValuesFrom UBERON:0008933 ] . -PAXSPN:80 a owl:Class . +PAXSPN:80 a owl:Class ; + rdfs:label "sacral parasympathetic nucleus" . PR:000000001 a owl:Class ; rdfs:label "protein" ; @@ -5042,6 +5201,21 @@ PR:000007786 a owl:Class ; PR:000000001, SAO:26622963 . +PR:000008235 a owl:Class ; + rdfs:label "glutamate receptor 3" ; + NIFRID:synonym "AMPA-selective glutamate receptor 3", + "GLUR3", + "GluR-3", + "GluR-C", + "GluR-K3", + "GLURC", + "glutamate receptor ionotropic, AMPA 3", + "GRIA3", + "Kiaa4184" ; + rdfs:subClassOf CHEBI:36080, + PR:000000001, + SAO:26622963 . + PR:000008476 a owl:Class ; rdfs:label "orexin" ; NIFRID:synonym "HCRT", @@ -5271,10 +5445,6 @@ PTHR:11653 a owl:Class . RO:0000081 a owl:Class ; rdfs:label "role of" . -RO:0002577 a owl:Class ; - rdfs:label "system" ; - rdfs:subClassOf BFO:0000040 . - SAO:26622963 a owl:Class ; rdfs:label "Protein" ; NIFRID:synonym "Protein" ; @@ -5365,8 +5535,7 @@ SAO:1164727693 a owl:Class ; SAO:26622963 . SAO:1224657022 a owl:Class ; - rdfs:label "Nervous System Cell" ; - rdfs:subClassOf BFO:0000040 . + rdfs:label "Nervous System Cell" . SAO:1246280606 a owl:Class ; rdfs:label "Synthetic Enzyme" ; @@ -5511,7 +5680,6 @@ UBERON:0000004 a owl:Class ; rdfs:subClassOf UBERON:0000475, UBERON:0002268, UBERON:0004121, - UBERON:0010314, [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0001456 ], @@ -5632,9 +5800,6 @@ UBERON:0000016 a owl:Class ; "pars endocrina pancreatis" ; rdfs:subClassOf UBERON:0000471, UBERON:0004119, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom NCBITaxon:6072 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0000949 ], @@ -5753,9 +5918,6 @@ UBERON:0000042 a owl:Class ; rdfs:subClassOf PR:000050567, UBERON:0000481, UBERON:0004120, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom NCBITaxon:6072 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0000060 ], @@ -5912,9 +6074,6 @@ UBERON:0000073 a owl:Class ; rdfs:label "Regional part of nervous system" ; NIFRID:synonym "part of nervous system" ; rdfs:subClassOf UBERON:0000481, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom NCBITaxon:6072 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0001016 ] . @@ -6014,10 +6173,7 @@ UBERON:0000126 a owl:Class ; NIFRID:synonym "cranial neural nucleus", "nucleus nervi cranialis", "nucleus of cranial nerve" ; - rdfs:subClassOf UBERON:0002308, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ] . + rdfs:subClassOf UBERON:0002308 . UBERON:0000127 a owl:Class ; rdfs:label "facial nucleus" ; @@ -6204,40 +6360,6 @@ UBERON:0000344 a owl:Class ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0012125 ] . -UBERON:0000348 a owl:Class ; - rdfs:label "ophthalmic nerve" ; - NIFRID:synonym "ciliary nerve", - "cranial nerve V, branch V1", - "ethmoidal nerve", - "first branch of fifth cranial nerve", - "first division of fifth cranial nerve", - "first division of trigeminal nerve", - "nervus ophthalmicus (V1)", - "nervus ophthalmicus (Va)", - "nervus ophthalmicus [v1]", - "nervus ophthalmicus [va]", - "ophthalmic division", - "ophthalmic division [V1]", - "ophthalmic division [Va]", - "ophthalmic division of fifth cranial nerve", - "ophthalmic division of trigeminal nerve (V1)", - "ophthalmic division of trigeminal nerve (Va)", - "ophthalmic nerve [V1]", - "ophthalmic nerve [Va]", - "opthalmic nerve", - "profundal nerve", - "profundus", - "profundus nerve", - "ramus opthalmicus profundus (ramus V1)", - "rostral branch of trigeminal nerve", - "trigeminal nerve ophthalmic division", - "trigeminal V nerve ophthalmic division" ; - rdfs:subClassOf UBERON:0004121, - UBERON:0011779, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0001645 ] . - UBERON:0000349 a owl:Class ; rdfs:label "limbic system" ; NIFRID:synonym "visceral brain" ; @@ -6260,53 +6382,6 @@ UBERON:0000369 a owl:Class ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0002420 ] . -UBERON:0000375 a owl:Class ; - rdfs:label "mandibular nerve" ; - NIFRID:synonym "inferior maxillary nerve", - "mandibular division [V3]", - "mandibular division [Vc]", - "mandibular division of fifth cranial nerve", - "mandibular division of trigeminal nerve [Vc; V3]", - "mandibular nerve [V3]", - "mandibular nerve [Vc]", - "n. mandibularis", - "nervus mandibularis", - "nervus mandibularis [v3]", - "nervus mandibularis [Vc; V3]", - "nervus mandibularis [vc]", - "ramus mandibularis (ramus V3)", - "third division of fifth cranial nerve", - "third division of trigeminal nerve", - "trigeminal nerve mandibular division", - "trigeminal V nerve mandibular division" ; - rdfs:subClassOf UBERON:0011779, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0001645 ] . - -UBERON:0000377 a owl:Class ; - rdfs:label "maxillary nerve" ; - NIFRID:synonym "maxillary division [V2]", - "maxillary division [Vb]", - "maxillary division of fifth cranial nerve", - "maxillary division of trigeminal nerve (Vb; V2)", - "maxillary nerve [V2]", - "maxillary nerve [Vb]", - "n. maxillaris", - "nervus maxillaris", - "nervus maxillaris (Vb; V2)", - "nervus maxillaris [v2]", - "nervus maxillaris [vb]", - "ramus maxillaris (ramus V2)", - "second division of fifth cranial nerve", - "second division of trigeminal nerve", - "trigeminal nerve maxillary division", - "trigeminal V nerve maxillary division" ; - rdfs:subClassOf UBERON:0011779, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0001645 ] . - UBERON:0000379 a owl:Class ; rdfs:label "tracheal mucosa" ; NIFRID:synonym "mucosa of organ of trachea", @@ -6461,10 +6536,19 @@ UBERON:0000458 a owl:Class ; rdfs:label "endocervix" ; rdfs:subClassOf PR:000050567, UBERON:0000064, + UBERON:0005156 . + +UBERON:0000459 a owl:Class ; + rdfs:label "uterine wall" ; + NIFRID:synonym "anatomical wall of uterus", + "uterus anatomical wall", + "uterus wall", + "wall of uterus" ; + rdfs:subClassOf UBERON:0000060, UBERON:0005156, [ a owl:Restriction ; owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0000002 ] . + owl:someValuesFrom UBERON:0000995 ] . UBERON:0000465 a owl:Class ; rdfs:label "material anatomical entity" ; @@ -6602,6 +6686,12 @@ UBERON:0000485 a owl:Class ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0000458 ] . +UBERON:0000486 a owl:Class ; + rdfs:label "multilaminar epithelium" ; + NIFRID:synonym "laminated epithelium", + "stratified epithelium" ; + rdfs:subClassOf UBERON:0000483 . + UBERON:0000488 a owl:Class ; rdfs:label "atypical epithelium" ; NIFRID:synonym "atypical epithelia", @@ -6651,16 +6741,6 @@ UBERON:0000922 a owl:Class ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0009097 ] . -UBERON:0000942 a owl:Class ; - rdfs:label "frontal nerve (branch of ophthalmic)" ; - NIFRID:synonym "frontal nerve", - "nervus frontalis" ; - rdfs:subClassOf UBERON:0004121, - UBERON:0011779, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0000348 ] . - UBERON:0000945 a owl:Class ; rdfs:label "stomach" ; NIFRID:synonym "anterior intestine", @@ -6686,9 +6766,6 @@ UBERON:0000947 a owl:Class ; rdfs:subClassOf UBERON:0003509, UBERON:0003519, UBERON:0013768, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0010191 ] . @@ -6765,10 +6842,7 @@ UBERON:0000957 a owl:Class ; UBERON:0000958 a owl:Class ; rdfs:label "medulla of organ" ; NIFRID:synonym "medulla" ; - rdfs:subClassOf UBERON:0000471, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom NCBITaxon:6072 ] . + rdfs:subClassOf UBERON:0000471 . UBERON:0000961 a owl:Class ; rdfs:label "thoracic ganglion" ; @@ -6783,14 +6857,6 @@ UBERON:0000961 a owl:Class ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0004863 ] . -UBERON:0000962 a owl:Class ; - rdfs:label "nerve of cervical vertebra" ; - NIFRID:synonym "cervical nerve", - "cervical nerve tree", - "cervical spinal nerve", - "nervus cervicalis" ; - rdfs:subClassOf UBERON:0001780 . - UBERON:0000966 a owl:Class ; rdfs:label "Retina", "retina" ; @@ -6834,9 +6900,6 @@ UBERON:0000974 a owl:Class ; NIFRID:synonym "collum", "neck (volume)" ; rdfs:subClassOf UBERON:0000475, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0000153 ], @@ -6984,6 +7047,20 @@ UBERON:0000995 a owl:Class ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0004175 ] . +UBERON:0000996 a owl:Class ; + rdfs:label "vagina" ; + NIFRID:synonym "distal oviductal region", + "distal portion of oviduct", + "vaginae" ; + rdfs:subClassOf UBERON:0004120, + UBERON:0013515, + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0003975 ], + [ a owl:Restriction ; + owl:onProperty RO:0002433 ; + owl:someValuesFrom UBERON:0003975 ] . + UBERON:0000997 a owl:Class ; rdfs:label "mammalian vulva" ; NIFRID:synonym "female pudendum", @@ -7213,9 +7290,6 @@ UBERON:0001043 a owl:Class ; rdfs:subClassOf UBERON:0004921, UBERON:0005178, UBERON:0013765, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0004908 ] . @@ -7412,14 +7486,17 @@ UBERON:0001182 a owl:Class ; "superior mesenteric arterial tree" ; rdfs:subClassOf UBERON:0005616 . +UBERON:0001190 a owl:Class ; + rdfs:label "ovarian artery" ; + NIFRID:synonym "arteria ovarica", + "ovarian arterial tree" ; + rdfs:subClassOf UBERON:0001637 . + UBERON:0001193 a owl:Class ; rdfs:label "hepatic artery" ; NIFRID:synonym "arteria hepatica", "arteria hepatica propria" ; rdfs:subClassOf UBERON:0001637, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0001279 ] . @@ -7429,10 +7506,7 @@ UBERON:0001194 a owl:Class ; NIFRID:synonym "arteria lienalis", "arteria splenica", "lienal artery" ; - rdfs:subClassOf UBERON:0004573, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0001640 ] . + rdfs:subClassOf UBERON:0004573 . UBERON:0001195 a owl:Class ; rdfs:label "inferior pancreaticoduodenal artery" ; @@ -7893,6 +7967,39 @@ UBERON:0001280 a owl:Class ; owl:onProperty RO:0002433 ; owl:someValuesFrom UBERON:0002107 ] . +UBERON:0001295 a owl:Class ; + rdfs:label "endometrium" ; + NIFRID:synonym "tunica mucosa (endometrium)", + "tunica mucosa uteri", + "uterine endometrium", + "uterine mucosa", + "uterine mucous membrane" ; + rdfs:subClassOf UBERON:0019042, + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0000459 ], + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0000995 ], + [ a owl:Restriction ; + owl:onProperty RO:0002433 ; + owl:someValuesFrom UBERON:0000995 ] . + +UBERON:0001296 a owl:Class ; + rdfs:label "myometrium" ; + NIFRID:synonym "tunica muscularis", + "tunica muscularis (myometrium)", + "uterine myometrium", + "uterine smooth muscle" ; + rdfs:subClassOf UBERON:0005156, + UBERON:0034933, + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0000459 ], + [ a owl:Restriction ; + owl:onProperty RO:0002433 ; + owl:someValuesFrom UBERON:0000995 ] . + UBERON:0001300 a owl:Class ; rdfs:label "scrotum" ; rdfs:subClassOf UBERON:0004120, @@ -7902,6 +8009,18 @@ UBERON:0001300 a owl:Class ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0004053 ] . +UBERON:0001305 a owl:Class ; + rdfs:label "ovarian follicle" ; + NIFRID:synonym "egg follicle", + "follicle of ovary", + "follicle of ovary viewed macroscopically", + "folliculi ovarici primarii", + "folliculi ovarici vesiculosi", + "ovary follicle" ; + rdfs:subClassOf PR:000050567, + UBERON:0004120, + UBERON:8450001 . + UBERON:0001333 a owl:Class ; rdfs:label "male urethra" ; rdfs:subClassOf UBERON:0000057, @@ -7927,6 +8046,22 @@ UBERON:0001338 a owl:Class ; owl:onProperty RO:0002433 ; owl:someValuesFrom UBERON:0000057 ] . +UBERON:0001344 a owl:Class ; + rdfs:label "epithelium of vagina" ; + NIFRID:synonym "epithelial tissue of vagina", + "epithelium, vaginal", + "vagina epithelial tissue", + "vagina epithelium", + "vaginal epithelium" ; + rdfs:subClassOf UBERON:0000486, + UBERON:0004804, + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0000996 ], + [ a owl:Restriction ; + owl:onProperty RO:0002433 ; + owl:someValuesFrom UBERON:0000996 ] . + UBERON:0001348 a owl:Class ; rdfs:label "brown adipose tissue" ; NIFRID:synonym "adipocytus multigutturalis", @@ -7976,7 +8111,7 @@ UBERON:0001474 a owl:Class ; owl:someValuesFrom UBERON:0001434 ] . UBERON:0001508 a owl:Class ; - rdfs:label "Aortic arch", + rdfs:label "('Aortic arch', 'arch of aorta')", "arch of aorta" ; NIFRID:synonym "aortic arch", "arcus aortae", @@ -7989,18 +8124,6 @@ UBERON:0001508 a owl:Class ; owl:onProperty RO:0002433 ; owl:someValuesFrom UBERON:0001515 ] . -UBERON:0001514 a owl:Class ; - rdfs:label "descending aorta" ; - NIFRID:synonym "aorta descendens", - "pars descendens aortae" ; - rdfs:subClassOf UBERON:0005800, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0000947 ], - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0001009 ] . - UBERON:0001515 a owl:Class ; rdfs:label "thoracic aorta" ; NIFRID:synonym "aorta thoracalis", @@ -8015,20 +8138,6 @@ UBERON:0001515 a owl:Class ; owl:onProperty RO:0002433 ; owl:someValuesFrom UBERON:0000947 ] . -UBERON:0001516 a owl:Class ; - rdfs:label "abdominal aorta" ; - NIFRID:synonym "abdominal part of aorta", - "aorta abdominalis", - "descending abdominal aorta", - "pars abdominalis aortae" ; - rdfs:subClassOf UBERON:0005800, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0001514 ], - [ a owl:Restriction ; - owl:onProperty RO:0002433 ; - owl:someValuesFrom UBERON:0001514 ] . - UBERON:0001530 a owl:Class ; rdfs:label "common carotid artery plus branches" ; NIFRID:synonym "a. carotis communis", @@ -8036,10 +8145,7 @@ UBERON:0001530 a owl:Class ; "carotid artery system", "common carotid artery", "trunk of common carotid tree" ; - rdfs:subClassOf UBERON:0004573, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ] . + rdfs:subClassOf UBERON:0004573 . UBERON:0001555 a owl:Class ; rdfs:label "digestive tract" ; @@ -8064,8 +8170,7 @@ UBERON:0001556 a owl:Class ; UBERON:0001557 a owl:Class ; rdfs:label "upper respiratory tract" ; - rdfs:subClassOf UBERON:0000072, - UBERON:0010314 . + rdfs:subClassOf UBERON:0000072 . UBERON:0001558 a owl:Class ; rdfs:label "lower respiratory tract" ; @@ -8088,7 +8193,10 @@ UBERON:0001567 a owl:Class ; owl:someValuesFrom UBERON:0001456 ], [ a owl:Restriction ; owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0004089 ] . + owl:someValuesFrom UBERON:0004089 ], + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:8480069 ] . UBERON:0001605 a owl:Class ; rdfs:label "ciliary muscle" ; @@ -8134,9 +8242,6 @@ UBERON:0001607 a owl:Class ; rdfs:subClassOf UBERON:0001606, UBERON:0004234, UBERON:0007521, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0001769 ] . @@ -8387,9 +8492,6 @@ UBERON:0001714 a owl:Class ; "head ganglion", "presumptive cranial ganglia" ; rdfs:subClassOf UBERON:0000045, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0000033 ] . @@ -8436,9 +8538,6 @@ UBERON:0001720 a owl:Class ; "statoacoustic (VIII) nucleus", "vestibulocochlear nucleus" ; rdfs:subClassOf UBERON:0007635, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0002610 ], @@ -8469,10 +8568,7 @@ UBERON:0001736 a owl:Class ; "maxillary gland", "submandibular salivary gland", "submaxillary gland" ; - rdfs:subClassOf UBERON:0001829, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0001710 ] . + rdfs:subClassOf UBERON:0001829 . UBERON:0001737 a owl:Class ; rdfs:label "larynx" ; @@ -8642,9 +8738,6 @@ UBERON:0001780 a owl:Class ; "spine nerve", "vertebral column nerve" ; rdfs:subClassOf UBERON:0001021, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0000010 ] . @@ -8776,10 +8869,7 @@ UBERON:0001795 a owl:Class ; UBERON:0001800 a owl:Class ; rdfs:label "sensory ganglion" ; NIFRID:synonym "ganglion sensorium" ; - rdfs:subClassOf UBERON:0000045, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ] . + rdfs:subClassOf UBERON:0000045 . UBERON:0001801 a owl:Class ; rdfs:label "anterior segment of eyeball" ; @@ -8825,9 +8915,6 @@ UBERON:0001805 a owl:Class ; "ganglion of visceral nervous system", "visceral nervous system ganglion" ; rdfs:subClassOf UBERON:0003338, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0002410 ] . @@ -8948,10 +9035,7 @@ UBERON:0001831 a owl:Class ; UBERON:0012102, [ a owl:Restriction ; owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0001567 ], - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0001710 ] . + owl:someValuesFrom UBERON:0001567 ] . UBERON:0001832 a owl:Class ; rdfs:label "sublingual gland" ; @@ -9221,10 +9305,7 @@ UBERON:0001884 a owl:Class ; NIFRID:synonym "diaphragmatic nerve", "nervus phrenicus", "phrenic" ; - rdfs:subClassOf UBERON:0003443, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0000962 ] . + rdfs:subClassOf UBERON:0003443 . UBERON:0001885 a owl:Class ; rdfs:label "dentate gyrus of hippocampal formation" ; @@ -9939,6 +10020,19 @@ UBERON:0002005 a owl:Class ; owl:onProperty RO:0002433 ; owl:someValuesFrom UBERON:0002410 ] . +UBERON:0002010 a owl:Class ; + rdfs:label "celiac nerve plexus" ; + NIFRID:synonym "celiac plexus", + "coeliac nerve plexus", + "coeliac plexus", + "plexus coeliacus", + "plexus nervosus coeliacus", + "solar plexus" ; + rdfs:subClassOf UBERON:0001816, + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0000916 ] . + UBERON:0002012 a owl:Class ; rdfs:label "pulmonary artery" ; NIFRID:synonym "arteria pulmonalis", @@ -9948,9 +10042,6 @@ UBERON:0002012 a owl:Class ; "truncus pulmonalis" ; rdfs:subClassOf UBERON:0001637, UBERON:0013768, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0008886 ] . @@ -10303,10 +10394,7 @@ UBERON:0002078 a owl:Class ; "right atrium of heart", "right cardiac atrium" ; rdfs:subClassOf UBERON:0002081, - UBERON:0035554, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ] . + UBERON:0035554 . UBERON:0002079 a owl:Class ; rdfs:label "left cardiac atrium" ; @@ -10317,10 +10405,7 @@ UBERON:0002079 a owl:Class ; "left atrium of heart", "left cardiac atrium" ; rdfs:subClassOf UBERON:0002081, - UBERON:0035553, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ] . + UBERON:0035553 . UBERON:0002080 a owl:Class ; rdfs:label "heart right ventricle" ; @@ -10330,10 +10415,7 @@ UBERON:0002080 a owl:Class ; "right ventricle of heart", "ventriculus dexter" ; rdfs:subClassOf UBERON:0002082, - UBERON:0035554, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ] . + UBERON:0035554 . UBERON:0002081 a owl:Class ; rdfs:label "cardiac atrium" ; @@ -10367,10 +10449,7 @@ UBERON:0002084 a owl:Class ; "left ventricle of heart", "ventriculus sinister cordis" ; rdfs:subClassOf UBERON:0002082, - UBERON:0035553, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ] . + UBERON:0035553 . UBERON:0002095 a owl:Class ; rdfs:label "mesentery" ; @@ -10514,6 +10593,16 @@ UBERON:0002112 a owl:Class ; owl:onProperty RO:0002433 ; owl:someValuesFrom UBERON:0001043 ] . +UBERON:0002118 a owl:Class ; + rdfs:label "right ovary" ; + rdfs:subClassOf UBERON:0000992, + UBERON:0015212 . + +UBERON:0002119 a owl:Class ; + rdfs:label "left ovary" ; + rdfs:subClassOf UBERON:0000992, + UBERON:0015212 . + UBERON:0002125 a owl:Class ; rdfs:label "thymus lobule" ; NIFRID:synonym "lobule of thymus", @@ -10824,9 +10913,6 @@ UBERON:0002186 a owl:Class ; [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0002048 ], - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0007196 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0010368 ] . @@ -10837,9 +10923,6 @@ UBERON:0002187 a owl:Class ; "bronchiolus terminalis", "terminal bronchiole tube" ; rdfs:subClassOf UBERON:0002186, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0010368 ], @@ -10988,9 +11071,6 @@ UBERON:0002211 a owl:Class ; NIFRID:synonym "initial segment of nerve", "radix nervi" ; rdfs:subClassOf UBERON:0000122, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0001016 ] . @@ -11115,6 +11195,19 @@ UBERON:0002257 a owl:Class ; owl:onProperty RO:0002433 ; owl:someValuesFrom UBERON:0002315 ] . +UBERON:0002258 a owl:Class ; + rdfs:label "dorsal funiculus of spinal cord" ; + NIFRID:synonym "dorsal funiculus", + "dorsal funiculus of spinal cord", + "dorsal white column of spinal cord", + "funiculus dorsalis", + "funiculus posterior medullae spinalis", + "posterior funiculus", + "posterior funiculus of spinal cord", + "posterior white column of spinal cord" ; + rdfs:subClassOf UBERON:0006127, + UBERON:0015212 . + UBERON:0002259 a owl:Class ; rdfs:label "corpora quadrigemina" ; NIFRID:synonym "colliculi", @@ -11130,6 +11223,52 @@ UBERON:0002259 a owl:Class ; owl:onProperty RO:0002433 ; owl:someValuesFrom UBERON:0002314 ] . +UBERON:0002260 a owl:Class ; + rdfs:label "ventral root of spinal cord" ; + NIFRID:synonym "anterior nerve root", + "anterior root", + "anterior root of spinal nerve", + "anterior spinal root", + "motor root of spinal nerve", + "motor spinal root", + "radix anterior (nervus spinalis)", + "radix anterior nervi spinalis", + "radix motoria (nervus spinalis)", + "root motoria nervi spinalis", + "root ventralis nervi spinalis", + "spinal nerve ventral root", + "ventral root", + "ventral root of spinal nerve", + "ventral roots", + "ventral spinal nerve root", + "ventral spinal root" ; + rdfs:subClassOf UBERON:0009623, + [ a owl:Restriction ; + owl:onProperty RO:0002433 ; + owl:someValuesFrom UBERON:0001780 ] . + +UBERON:0002261 a owl:Class ; + rdfs:label "dorsal root of spinal cord" ; + NIFRID:synonym "dorsal root", + "dorsal root of spinal nerve", + "dorsal roots", + "dorsal spinal nerve root", + "dorsal spinal root", + "posterior root of spinal nerve", + "radix dorsalis", + "radix posterior", + "radix posterior (nervus spinalis)", + "radix posterior nervi spinalis", + "radix sensoria (nervus spinalis)", + "root dorsali nervi spinalis", + "root sensoria nervi spinalis", + "sensory root of spinal nerve", + "sensory spinal root" ; + rdfs:subClassOf UBERON:0009623, + [ a owl:Restriction ; + owl:onProperty RO:0002433 ; + owl:someValuesFrom UBERON:0001780 ] . + UBERON:0002262 a owl:Class ; rdfs:label "celiac ganglion" ; NIFRID:synonym "coeliac ganglion" ; @@ -11452,9 +11591,6 @@ UBERON:0002357 a owl:Class ; NIFRID:synonym "pericardium serosum", "serous portion of pericardium" ; rdfs:subClassOf UBERON:0000042, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0002406 ] . @@ -11630,9 +11766,6 @@ UBERON:0002407 a owl:Class ; rdfs:label "pericardium" ; rdfs:subClassOf PR:000050567, UBERON:0000481, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom NCBITaxon:6072 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0015410 ] . @@ -11957,6 +12090,16 @@ UBERON:0002477 a owl:Class ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0001875 ] . +UBERON:0002493 a owl:Class ; + rdfs:label "uterine artery" ; + NIFRID:synonym "arteria uterina" ; + rdfs:subClassOf UBERON:0001190, + UBERON:0005156, + UBERON:0015212, + [ a owl:Restriction ; + owl:onProperty RO:0002433 ; + owl:someValuesFrom UBERON:0000995 ] . + UBERON:0002499 a owl:Class ; rdfs:label "cochlear labyrinth" ; rdfs:subClassOf UBERON:0000064, @@ -12846,6 +12989,18 @@ UBERON:0002849 a owl:Class ; "sixth thoracic spinal ganglion" ; rdfs:subClassOf UBERON:0002835 . +UBERON:0002853 a owl:Class ; + rdfs:label "tenth thoracic dorsal root ganglion" ; + NIFRID:synonym "tenth thoracic dorsal root ganglion", + "tenth thoracic spinal ganglion" ; + rdfs:subClassOf UBERON:0002835 . + +UBERON:0002854 a owl:Class ; + rdfs:label "eleventh thoracic dorsal root ganglion" ; + NIFRID:synonym "eleventh thoracic dorsal root ganglion", + "eleventh thoracic spinal ganglion" ; + rdfs:subClassOf UBERON:0002835 . + UBERON:0002855 a owl:Class ; rdfs:label "twelfth thoracic dorsal root ganglion" ; NIFRID:synonym "twelfth thoracic dorsal root ganglion", @@ -12884,6 +13039,18 @@ UBERON:0002860 a owl:Class ; "first sacral spinal ganglion" ; rdfs:subClassOf UBERON:0002837 . +UBERON:0002861 a owl:Class ; + rdfs:label "second sacral dorsal root ganglion" ; + NIFRID:synonym "second sacral dorsal root ganglion", + "second sacral spinal ganglion" ; + rdfs:subClassOf UBERON:0002837 . + +UBERON:0002862 a owl:Class ; + rdfs:label "third sacral dorsal root ganglion" ; + NIFRID:synonym "third sacral dorsal root ganglion", + "third sacral spinal ganglion" ; + rdfs:subClassOf UBERON:0002837 . + UBERON:0002865 a owl:Class ; rdfs:label "arcuate nucleus of medulla" ; NIFRID:synonym "ArcM", @@ -13773,9 +13940,6 @@ UBERON:0003711 a owl:Class ; "vena brachiocephalica", "venae anonyma" ; rdfs:subClassOf UBERON:0001638, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0007204 ] . @@ -13812,20 +13976,14 @@ UBERON:0003716 a owl:Class ; "recurrent nerve", "vagus X nerve recurrent laryngeal branch" ; rdfs:subClassOf UBERON:0011779, - UBERON:0035642, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0001759 ] . + UBERON:0035642 . UBERON:0003721 a owl:Class ; rdfs:label "lingual nerve" ; NIFRID:synonym "lingual branch of trigeminal nerve", "trigeminal nerve lingual branch", "trigeminal V nerve lingual branch" ; - rdfs:subClassOf UBERON:0011779, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0000375 ] . + rdfs:subClassOf UBERON:0011779 . UBERON:0003729 a owl:Class ; rdfs:label "mouth mucosa" ; @@ -14027,6 +14185,31 @@ UBERON:0003883 a owl:Class ; owl:onProperty RO:0002433 ; owl:someValuesFrom UBERON:0001954 ] . +UBERON:0003889 a owl:Class ; + rdfs:label "fallopian tube" ; + NIFRID:synonym "fallopian tubes", + "female paramesonephric duct", + "mammalian oviduct", + "paramesonephric duct of female", + "salpinges", + "salpinx", + "tuba uterina", + "uterine tube (sensu Mammalia)" ; + rdfs:subClassOf UBERON:0004120, + UBERON:0013515, + UBERON:0015212, + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0000993 ], + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002355 ] . + +UBERON:0003891 a owl:Class ; + rdfs:label "stroma" ; + NIFRID:synonym "stromal connective tissue" ; + rdfs:subClassOf UBERON:0000064 . + UBERON:0003893 a owl:Class ; rdfs:label "capsule" ; rdfs:subClassOf UBERON:0000158 . @@ -14147,6 +14330,27 @@ UBERON:0003964 a owl:Class ; "three great gangliated plexuses" ; rdfs:subClassOf UBERON:0001806 . +UBERON:0003975 a owl:Class ; + rdfs:label "internal female genitalia" ; + NIFRID:synonym "female internal genitalia", + "internal female genital organ", + "internal genitalia of female reproductive system", + "organa genitalia feminina interna" ; + rdfs:subClassOf UBERON:0003134, + UBERON:0004175, + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0000474 ] . + +UBERON:0003984 a owl:Class ; + rdfs:label "uterine tube infundibulum" ; + NIFRID:synonym "infundibulum", + "infundibulum of fallopian tube", + "infundibulum of oviduct", + "infundibulum of uterine tube", + "infundibulum tubae uterinae" ; + rdfs:subClassOf UBERON:0013515 . + UBERON:0003988 a owl:Class ; rdfs:label "thymus corticomedullary boundary" ; NIFRID:synonym "thymic cortico-medullary boundary", @@ -14214,9 +14418,6 @@ UBERON:0004069 a owl:Class ; "accessory olfactory formation", "olfactory bulb accessory nucleus" ; rdfs:subClassOf UBERON:0002616, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0002264 ], @@ -14477,6 +14678,23 @@ UBERON:0004222 a owl:Class ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0001167 ] . +UBERON:0004223 a owl:Class ; + rdfs:label "vagina smooth muscle" ; + NIFRID:synonym "involuntary muscle of vagina", + "non-striated muscle of vagina", + "smooth muscle of vagina", + "smooth muscle tissue of vagina", + "vagina involuntary muscle", + "vagina non-striated muscle", + "vagina smooth muscle", + "vagina smooth muscle tissue", + "vaginal smooth muscle" ; + rdfs:subClassOf UBERON:0001135, + UBERON:0005156, + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0000996 ] . + UBERON:0004226 a owl:Class ; rdfs:label "gastrointestinal system smooth muscle" ; NIFRID:synonym "smooth muscle tissue of gastrointestinal system" ; @@ -14543,9 +14761,6 @@ UBERON:0004293 a owl:Class ; rdfs:label "parasympathetic nerve" ; NIFRID:synonym "nerve of parasympathetic nervous system" ; rdfs:subClassOf UBERON:0001021, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0000011 ] . @@ -14780,9 +14995,6 @@ UBERON:0004708 a owl:Class ; "pelvic/pectoral appendage" ; rdfs:subClassOf PR:000050567, UBERON:0000026, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0010707 ] . @@ -14980,6 +15192,25 @@ UBERON:0004802 a owl:Class ; owl:onProperty RO:0002433 ; owl:someValuesFrom UBERON:0001004 ] . +UBERON:0004804 a owl:Class ; + rdfs:label "oviduct epithelium" ; + NIFRID:synonym "columnar epithelium of the fallopian tube", + "columnar epithelium of the oviduct", + "epithelial tissue of oviduct", + "epithelium of fallopian tube", + "epithelium of oviduct", + "epithelium of uterine tube", + "fallopian tube epithelium", + "oviduct epithelial tissue" ; + rdfs:subClassOf UBERON:0005156, + UBERON:0012275, + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0000993 ], + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0003889 ] . + UBERON:0004805 a owl:Class ; rdfs:label "seminal vesicle epithelium" ; NIFRID:synonym "epithelial tissue of seminal gland", @@ -15722,16 +15953,6 @@ UBERON:0005462 a owl:Class ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0002417 ] . -UBERON:0005476 a owl:Class ; - rdfs:label "spinal nerve trunk" ; - NIFRID:synonym "spinal nerve (trunk)", - "spinal neural trunk", - "trunk of spinal nerve" ; - rdfs:subClassOf UBERON:0002464, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0001780 ] . - UBERON:0005479 a owl:Class ; rdfs:label "superior mesenteric ganglion" ; NIFRID:synonym "ganglion mesentericum superius", @@ -15775,10 +15996,7 @@ UBERON:0005488 a owl:Class ; NIFRID:synonym "plexus mesentericus superior", "superior mesenteric nerve plexus" ; rdfs:subClassOf UBERON:0000122, - UBERON:0035771, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ] . + UBERON:0035771 . UBERON:0005616 a owl:Class ; rdfs:label "mesenteric artery" ; @@ -15824,10 +16042,7 @@ UBERON:0005742 a owl:Class ; UBERON:0005764 a owl:Class ; rdfs:label "acellular membrane" ; - rdfs:subClassOf UBERON:0000476, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0000061 ] . + rdfs:subClassOf UBERON:0000476 . UBERON:0005769 a owl:Class ; rdfs:label "basement membrane of epithelium" ; @@ -16055,9 +16270,6 @@ UBERON:0006134 a owl:Class ; "neurofibra", "neurofibrum" ; rdfs:subClassOf UBERON:0005162, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0001019 ], @@ -16266,7 +16478,8 @@ UBERON:0006490 a owl:Class ; rdfs:subClassOf UBERON:0007714 . UBERON:0006491 a owl:Class ; - rdfs:label "C5 segment of cervical spinal cord" ; + rdfs:label "C5 segment", + "C5 segment of cervical spinal cord" ; NIFRID:synonym "C5 segment", "C5 spinal cord segment", "fifth cervical spinal cord segment" ; @@ -16514,6 +16727,20 @@ UBERON:0006947 a owl:Class ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0004054 ] . +UBERON:0006960 a owl:Class ; + rdfs:label "ovary stroma" ; + NIFRID:synonym "interstitial tissue of ovary", + "ovarian stroma", + "ovary stroma", + "stroma of the ovary", + "stroma ovarica", + "stroma ovarii" ; + rdfs:subClassOf UBERON:0003891, + UBERON:0005156, + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0000992 ] . + UBERON:0007023 a owl:Class ; rdfs:label "adult organism" ; NIFRID:synonym "adult", @@ -16787,19 +17014,13 @@ UBERON:0007640 a owl:Class ; "stratum hippocampi moleculare et substratum lacunosum", "stratum lacunosum moleculare", "stratum lacunosum-moleculare" ; - rdfs:subClassOf UBERON:0002305, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0001954 ] . + rdfs:subClassOf UBERON:0002305 . UBERON:0007641 a owl:Class ; rdfs:label "trigeminal nuclear complex" ; NIFRID:synonym "nuclei trigemini", "trigeminal nuclei" ; - rdfs:subClassOf UBERON:0007245, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ] . + rdfs:subClassOf UBERON:0007245 . UBERON:0007651 a owl:Class ; rdfs:label "anatomical junction" ; @@ -16841,6 +17062,12 @@ UBERON:0007712 a owl:Class ; NIFRID:synonym "fourth thoracic dorsal root ganglion" ; rdfs:subClassOf UBERON:0002835 . +UBERON:0007713 a owl:Class ; + rdfs:label "fourth sacral spinal ganglion" ; + NIFRID:synonym "forth sacral dorsal root ganglion", + "fourth sacral dorsal root ganglion" ; + rdfs:subClassOf UBERON:0002837 . + UBERON:0007714 a owl:Class ; rdfs:label "cervical subsegment of spinal cord" ; NIFRID:synonym "segment part of cervical spinal cord" ; @@ -16976,10 +17203,27 @@ UBERON:0008231 a owl:Class ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0011270 ] . +UBERON:0008323 a owl:Class ; + rdfs:label "dorsal artery of clitoris" ; + rdfs:subClassOf UBERON:0001637, + UBERON:0005156, + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002411 ] . + UBERON:0008324 a owl:Class ; rdfs:label "erectile tissue" ; rdfs:subClassOf UBERON:0000479 . +UBERON:0008331 a owl:Class ; + rdfs:label "clitoral smooth muscle" ; + NIFRID:synonym "clitoris smooth muscle" ; + rdfs:subClassOf UBERON:0001135, + UBERON:0005156, + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002411 ] . + UBERON:0008715 a owl:Class ; rdfs:label "muscle tissue of prostate" ; NIFRID:synonym "prostate gland muscle tissue", @@ -17000,10 +17244,7 @@ UBERON:0008810 a owl:Class ; "nasopalatine nerves", "nervus nasopalatinus", "Scarpa's nerve" ; - rdfs:subClassOf UBERON:0011779, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0000377 ] . + rdfs:subClassOf UBERON:0011779 . UBERON:0008811 a owl:Class ; rdfs:label "intromittent organ" ; @@ -17155,6 +17396,18 @@ UBERON:0008993 a owl:Class ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0001904 ] . +UBERON:0008995 a owl:Class ; + rdfs:label "nucleus of cerebellar nuclear complex" ; + NIFRID:synonym "cerebellar nucleus", + "deep cerebellar nucleus" ; + rdfs:subClassOf UBERON:0009662, + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002130 ], + [ a owl:Restriction ; + owl:onProperty RO:0002433 ; + owl:someValuesFrom UBERON:0002037 ] . + UBERON:0009009 a owl:Class ; rdfs:label "carotid sinus nerve" ; NIFRID:synonym "carotid branch of glossopharyngeal nerve", @@ -17163,10 +17416,7 @@ UBERON:0009009 a owl:Class ; "ramus sinus carotici nervi glossopharyngei", "ramus sinus carotici nervus glossopharyngei", "sinus nerve of Hering" ; - rdfs:subClassOf UBERON:0011779, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0001649 ] . + rdfs:subClassOf UBERON:0011779 . UBERON:0009010 a owl:Class ; rdfs:label "periurethral tissue" ; @@ -17245,6 +17495,14 @@ UBERON:0009631 a owl:Class ; "nerve root part of lumbar spinal cord" ; rdfs:subClassOf UBERON:0009623 . +UBERON:0009632 a owl:Class ; + rdfs:label "root of cervical nerve" ; + NIFRID:synonym "cervical neural root", + "cervical spinal root", + "nerve root part of cervical spinal cord", + "root of cervical spinal nerve" ; + rdfs:subClassOf UBERON:0009623 . + UBERON:0009633 a owl:Class ; rdfs:label "root of sacral nerve" ; NIFRID:synonym "nerve root part of sacral spinal cord", @@ -17289,10 +17547,7 @@ UBERON:0009675 a owl:Class ; "parasympathetic root of submandibular ganglion", "radix parasympathica ganglii submandibularis", "tympanic cord" ; - rdfs:subClassOf UBERON:0001785, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0001647 ] . + rdfs:subClassOf UBERON:0001785 . UBERON:0009842 a owl:Class ; rdfs:label "glandular acinus" ; @@ -17459,7 +17714,10 @@ UBERON:0010133 a owl:Class ; rdfs:subClassOf UBERON:0002368, [ a owl:Restriction ; owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0001016 ] . + owl:someValuesFrom UBERON:0001016 ], + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:8600018 ] . UBERON:0010134 a owl:Class ; rdfs:label "secretory circumventricular organ" ; @@ -17570,7 +17828,8 @@ UBERON:0010368 a owl:Class ; UBERON:0010369 a owl:Class ; rdfs:label "secondary pulmonary lobule" ; - NIFRID:synonym "lobulus pulmonis secondarius" ; + NIFRID:synonym "lobulus pulmonis secondarius", + "respiratory lobule" ; rdfs:subClassOf UBERON:0010368, [ a owl:Restriction ; owl:onProperty partOf: ; @@ -17685,10 +17944,7 @@ UBERON:0011096 a owl:Class ; rdfs:label "lacrimal nerve" ; NIFRID:synonym "nervus lacrimalis" ; rdfs:subClassOf UBERON:0004121, - UBERON:0011779, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0000348 ] . + UBERON:0011779 . UBERON:0011134 a owl:Class ; rdfs:label "nonsynovial joint" ; @@ -17842,17 +18098,13 @@ UBERON:0011300 a owl:Class ; owl:someValuesFrom UBERON:0001893 ] . UBERON:0011326 a owl:Class ; - rdfs:label "Superior laryngeal nerve", - "superior laryngeal nerve" ; + rdfs:label "superior laryngeal nerve" ; NIFRID:synonym "nervus laryngealis superior", "nervus laryngeus superior", "superior laryngeal branch of inferior vagal ganglion", "superior laryngeal branch of vagus" ; rdfs:subClassOf UBERON:0011779, - UBERON:0035642, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0001759 ] . + UBERON:0035642 . UBERON:0011374 a owl:Class ; rdfs:label "prepuce" ; @@ -17976,9 +18228,6 @@ UBERON:0011892 a owl:Class ; "ventral uveal tract" ; rdfs:subClassOf UBERON:0000481, UBERON:0004121, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom NCBITaxon:6072 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0001768 ], @@ -18089,10 +18338,7 @@ UBERON:0012254 a owl:Class ; rdfs:label "abdominal aorta artery" ; NIFRID:synonym "abdominal artery", "artery of abdomen" ; - rdfs:subClassOf UBERON:0004573, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0001516 ] . + rdfs:subClassOf UBERON:0004573 . UBERON:0012274 a owl:Class ; rdfs:label "columnar epithelium" ; @@ -18149,6 +18395,21 @@ UBERON:0012399 a owl:Class ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0004220 ] . +UBERON:0012648 a owl:Class ; + rdfs:label "ampulla of uterine tube" ; + NIFRID:synonym "ampulla of fallopian tube", + "ampulla of oviduct", + "ampulla of the fallopian tube", + "ampulla of uterine tube", + "ampulla tubae uterinae", + "uterine tube ampulla" ; + rdfs:subClassOf UBERON:0000064, + UBERON:0004120, + UBERON:0005156, + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0003889 ] . + UBERON:0012652 a owl:Class ; rdfs:label "colorectum" ; rdfs:subClassOf UBERON:0004921, @@ -18175,6 +18436,7 @@ UBERON:0013232 a owl:Class ; UBERON:0013473 a owl:Class ; rdfs:label "lower esophagus" ; NIFRID:synonym "distal part of esophagus", + "esophagus distal third", "lower third of esophagus" ; rdfs:subClassOf UBERON:0004921, [ a owl:Restriction ; @@ -18247,9 +18509,6 @@ UBERON:0013657 a owl:Class ; "CamelHump" ; rdfs:subClassOf PR:000050567, UBERON:0000481, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom NCBITaxon:6072 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0001137 ] . @@ -18495,6 +18754,13 @@ UBERON:0014631 a owl:Class ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0004677 ] . +UBERON:0014634 a owl:Class ; + rdfs:label "Ventral nerve root of cervical spinal cord" ; + NIFRID:synonym "anterior nerve root of cervical spinal cord", + "ventral nerve root of cervical spinal cord" ; + rdfs:subClassOf UBERON:0002260, + UBERON:0009632 . + UBERON:0014778 a owl:Class ; rdfs:label "cell group" ; NIFRID:synonym "group of cells" ; @@ -18515,9 +18781,6 @@ UBERON:0014892 a owl:Class ; rdfs:label "skeletal muscle organ" ; NIFRID:synonym "skeletal muscle" ; rdfs:subClassOf UBERON:0001630, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0002529 ], @@ -18543,6 +18806,28 @@ UBERON:0015154 a owl:Class ; "lateral orbital gland" ; rdfs:subClassOf UBERON:0015152 . +UBERON:0015173 a owl:Class ; + rdfs:label "helicine branch of uterine artery" ; + NIFRID:synonym "arcuate artery of uterus", + "helicine arteriole", + "helicine artery of uterus", + "rami helicini uterinae", + "spiral arteries", + "spiral artery" ; + rdfs:subClassOf UBERON:0015177, + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0001296 ] . + +UBERON:0015177 a owl:Class ; + rdfs:label "helicine artery" ; + NIFRID:synonym "helicine arteries" ; + rdfs:subClassOf UBERON:0001637, + UBERON:0005156, + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0000990 ] . + UBERON:0015203 a owl:Class ; rdfs:label "non-connected functional system" ; rdfs:subClassOf UBERON:0034923 . @@ -18553,10 +18838,7 @@ UBERON:0015204 a owl:Class ; UBERON:0015212 a owl:Class ; rdfs:label "lateral structure" ; - rdfs:subClassOf UBERON:0000061, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0000465 ] . + rdfs:subClassOf UBERON:0000061 . UBERON:0015228 a owl:Class ; rdfs:label "circulatory organ" ; @@ -18875,6 +19157,17 @@ UBERON:0016630 a owl:Class ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0016621 ] . +UBERON:0016632 a owl:Class ; + rdfs:label "isthmus of fallopian tube" ; + NIFRID:synonym "isthmus of oviduct", + "isthmus of uterine tube", + "isthmus tubae uterinae", + "uterine tube isthmus" ; + rdfs:subClassOf UBERON:0003889, + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0003889 ] . + UBERON:0016848 a owl:Class ; rdfs:label "retroambiguus nucleus" ; NIFRID:synonym "nucleus retroambigualis", @@ -18897,10 +19190,7 @@ UBERON:0017642 a owl:Class ; rdfs:label "communicating branch of spinal nerve" ; NIFRID:synonym "rami communicantes", "rami communicantes of spinal nerve" ; - rdfs:subClassOf UBERON:0001021, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0005476 ] . + rdfs:subClassOf UBERON:0001021 . UBERON:0017672 a owl:Class ; rdfs:label "abdominal viscera" ; @@ -18975,10 +19265,7 @@ UBERON:0018412 a owl:Class ; "nerve of the pterygoid canal", "pterygoid canal nerve", "vidian nerve" ; - rdfs:subClassOf UBERON:0011779, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0001647 ] . + rdfs:subClassOf UBERON:0011779 . UBERON:0018675 a owl:Class ; rdfs:label "pelvic splanchnic nerve" ; @@ -18997,10 +19284,7 @@ UBERON:0018675 a owl:Class ; UBERON:0018679 a owl:Class ; rdfs:label "thoracic splanchnic nerve" ; rdfs:subClassOf UBERON:0003715, - UBERON:0003824, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0004863 ] . + UBERON:0003824 . UBERON:0018680 a owl:Class ; rdfs:label "greater splanchnic nerve" ; @@ -19023,6 +19307,15 @@ UBERON:0018707 a owl:Class ; rdfs:subClassOf UBERON:0000489, UBERON:0009856 . +UBERON:0019042 a owl:Class ; + rdfs:label "reproductive system mucosa" ; + NIFRID:synonym "genital mucosa" ; + rdfs:subClassOf UBERON:0000344, + UBERON:0005156, + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0000990 ] . + UBERON:0019207 a owl:Class ; rdfs:label "chorioretinal region" ; NIFRID:synonym "chorioretina", @@ -19032,9 +19325,6 @@ UBERON:0019207 a owl:Class ; rdfs:subClassOf UBERON:0000481, UBERON:0004121, UBERON:0010314, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom NCBITaxon:6072 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0010230 ] . @@ -19130,9 +19420,6 @@ UBERON:0022278 a owl:Class ; "Onuf's nucleus", "pudendal neural nucleus" ; rdfs:subClassOf UBERON:0011777, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0002257 ], @@ -19140,28 +19427,13 @@ UBERON:0022278 a owl:Class ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0005853 ] . -UBERON:0022300 a owl:Class ; - rdfs:label "nasociliary nerve" ; - NIFRID:synonym "nasal nerve", - "nasociliary", - "nasociliary nerve", - "nervus nasociliaris" ; - rdfs:subClassOf UBERON:0004121, - UBERON:0011779, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0000942 ] . - UBERON:0022301 a owl:Class ; rdfs:label "long ciliary nerve" ; NIFRID:synonym "long ciliary nerve", "nervi ciliares longi" ; rdfs:subClassOf UBERON:0003438, UBERON:0004121, - UBERON:0011779, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0022300 ] . + UBERON:0011779 . UBERON:0022302 a owl:Class ; rdfs:label "short ciliary nerve" ; @@ -19172,10 +19444,7 @@ UBERON:0022302 a owl:Class ; rdfs:subClassOf UBERON:0003438, UBERON:0004293, UBERON:0010313, - UBERON:0011779, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0002058 ] . + UBERON:0011779 . UBERON:0022303 a owl:Class ; rdfs:label "Cell layer", @@ -19306,13 +19575,7 @@ UBERON:0034713 a owl:Class ; "cranial nerve or tract", "neuron projection bundle from brain" ; rdfs:subClassOf UBERON:0000122, - UBERON:0015212, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ], - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0000033 ] . + UBERON:0015212 . UBERON:0034728 a owl:Class ; rdfs:label "autonomic nerve" ; @@ -19321,17 +19584,11 @@ UBERON:0034728 a owl:Class ; rdfs:subClassOf UBERON:0011779, [ a owl:Restriction ; owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0002410 ], - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0036264 ] . + owl:someValuesFrom UBERON:0002410 ] . UBERON:0034729 a owl:Class ; rdfs:label "sympathetic nerve" ; rdfs:subClassOf UBERON:0001021, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ], [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0000013 ] . @@ -19474,10 +19731,7 @@ UBERON:0035770 a owl:Class ; "plexus mesentericus inferior", "plexus nervosus mesentericus inferior" ; rdfs:subClassOf UBERON:0000122, - UBERON:0035771, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom RO:0002577 ] . + UBERON:0035771 . UBERON:0035771 a owl:Class ; rdfs:label "mesenteric plexus" ; @@ -19555,22 +19809,7 @@ UBERON:0036216 a owl:Class ; "tympanic", "tympanic branch", "tympanic branch of the glossopharyngeal" ; - rdfs:subClassOf UBERON:0011779, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0001649 ] . - -UBERON:0036264 a owl:Class ; - rdfs:label "zygomaticotemporal nerve" ; - NIFRID:synonym "ramus zygomaticotemporalis (Nervus zygomaticus)", - "ramus zygomaticotemporalis nervus zygomatici", - "zygomaticotemporal", - "zygomaticotemporal branch", - "zygomaticotemporal branch of zygomatic nerve" ; - rdfs:subClassOf UBERON:0011779, - [ a owl:Restriction ; - owl:onProperty partOf: ; - owl:someValuesFrom UBERON:0000377 ] . + rdfs:subClassOf UBERON:0011779 . UBERON:0036295 a owl:Class ; rdfs:label "renal pelvis/ureter" ; @@ -19607,6 +19846,16 @@ UBERON:1000024 a owl:Class ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0002106 ] . +UBERON:8410010 a owl:Class ; + rdfs:label "fimbria of uterine tube" ; + NIFRID:synonym "fimbria of fallopian tube", + "fimbriae of fallopian tube", + "fimbriae of uterine tube" ; + rdfs:subClassOf UBERON:0003889, + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0003889 ] . + UBERON:8410058 a owl:Class ; rdfs:label "Myenteric nerve plexus of colon" ; rdfs:subClassOf UBERON:0002439, @@ -19653,14 +19902,40 @@ UBERON:8440004 a owl:Class ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0001950 ] . +UBERON:8440013 a owl:Class ; + rdfs:label "fasciola cinerea" ; + NIFRID:synonym "FC" ; + rdfs:subClassOf UBERON:0000064, + UBERON:0004121, + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002421 ] . + UBERON:8440015 a owl:Class ; rdfs:label "noradrenergic cell groups" ; rdfs:subClassOf UBERON:0002616 . +UBERON:8440043 a owl:Class ; + rdfs:label "superior paraolivary nucleus" ; + NIFRID:synonym "SPON" ; + rdfs:subClassOf UBERON:0007247 . + +UBERON:8450001 a owl:Class ; + rdfs:label "egg follicle" ; + rdfs:subClassOf UBERON:0000064, + UBERON:0005156, + [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0000992 ] . + UBERON:8450002 a owl:Class ; rdfs:label "excretory system" ; rdfs:subClassOf UBERON:0000467 . +UBERON:8480069 a owl:Class ; + rdfs:label "temporofacial region" ; + rdfs:subClassOf UBERON:0001444 . + UBERON:8600017 a owl:Class ; rdfs:label "bronchopulmonary segment" ; NIFRID:synonym "lung segment" ; @@ -19673,6 +19948,11 @@ UBERON:8600017 a owl:Class ; owl:onProperty RO:0002433 ; owl:someValuesFrom UBERON:0000101 ] . +UBERON:8600018 a owl:Class ; + rdfs:label "neuroendocrine system" ; + NIFRID:synonym "NES" ; + rdfs:subClassOf UBERON:0000467 . + ### Annotations ilxtr:parcellationLabel rdfs:subClassOf UBERON:0001062 . @@ -19681,4 +19961,6 @@ ilxtr:Phenotype rdfs:subClassOf BFO:0000016 . overlaps: rdfs:label "overlaps" . -### Serialized using the ttlser deterministic serializer v1.2.1 +SAO:1224657022 rdfs:subClassOf BFO:0000040 . + +### Serialized using the ttlser deterministic serializer v1.2.2 From 3009743c7a383f9e83bddf05860d3f13f9a4a22c Mon Sep 17 00:00:00 2001 From: Tom Gillespie Date: Mon, 4 Mar 2024 12:58:40 -0800 Subject: [PATCH 4/5] neurons npo.ttl manually add labels for 2 ilxtr: terms --- ttl/npo.ttl | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/ttl/npo.ttl b/ttl/npo.ttl index 1d13e6ff..73b74c1c 100644 --- a/ttl/npo.ttl +++ b/ttl/npo.ttl @@ -19955,10 +19955,14 @@ UBERON:8600018 a owl:Class ; ### Annotations +ilxtr:cardiac-interganglionic-nerve rdfs:label "cardiac interganglionic nerve" . + ilxtr:parcellationLabel rdfs:subClassOf UBERON:0001062 . ilxtr:Phenotype rdfs:subClassOf BFO:0000016 . +ilxtr:vago-sympathetic-trunk rdfs:label "vago-sympathetic trunk" . + overlaps: rdfs:label "overlaps" . SAO:1224657022 rdfs:subClassOf BFO:0000040 . From 19705890df3e3b871af771386bfc9ebcae834293 Mon Sep 17 00:00:00 2001 From: Tom Gillespie Date: Mon, 4 Mar 2024 12:59:20 -0800 Subject: [PATCH 5/5] neurons part-of-self.ttl updated --- ttl/generated/part-of-self.ttl | 12 ++++++++++++ 1 file changed, 12 insertions(+) diff --git a/ttl/generated/part-of-self.ttl b/ttl/generated/part-of-self.ttl index 7aa36311..b6ad28b2 100644 --- a/ttl/generated/part-of-self.ttl +++ b/ttl/generated/part-of-self.ttl @@ -157,6 +157,10 @@ ILX:0738444 rdfs:subClassOf [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom ILX:0738444 ] . +ILX:0739241 rdfs:subClassOf [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0739241 ] . + ILX:0739295 rdfs:subClassOf [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom ILX:0739295 ] . @@ -293,6 +297,10 @@ ILX:0786141 rdfs:subClassOf [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom ILX:0786141 ] . +ILX:0786163 rdfs:subClassOf [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom ILX:0786163 ] . + ILX:0786228 rdfs:subClassOf [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom ILX:0786228 ] . @@ -1853,6 +1861,10 @@ UBERON:0002257 rdfs:subClassOf [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0002257 ] . +UBERON:0002258 rdfs:subClassOf [ a owl:Restriction ; + owl:onProperty partOf: ; + owl:someValuesFrom UBERON:0002258 ] . + UBERON:0002262 rdfs:subClassOf [ a owl:Restriction ; owl:onProperty partOf: ; owl:someValuesFrom UBERON:0002262 ] .