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CMakeLists.txt
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project(ORNA)
cmake_minimum_required(VERSION 2.6)
################################################################################
# The version number.
################################################################################
SET (gatb-tool_VERSION_MAJOR 1)
SET (gatb-tool_VERSION_MINOR 0)
SET (gatb-tool_VERSION_PATCH 0)
IF (DEFINED MAJOR)
SET (gatb-tool_VERSION_MAJOR ${MAJOR})
ENDIF()
IF (DEFINED MINOR)
SET (gatb-tool_VERSION_MINOR ${MINOR})
ENDIF()
IF (DEFINED PATCH)
SET (gatb-tool_VERSION_PATCH ${PATCH})
ENDIF()
set (gatb-tool-version ${gatb-tool_VERSION_MAJOR}.${gatb-tool_VERSION_MINOR}.${gatb-tool_VERSION_PATCH})
################################################################################
# Define cmake modules directory
################################################################################
SET (GATB_CORE_HOME ${PROJECT_SOURCE_DIR}/thirdparty/gatb-core/gatb-core/)
SET (CMAKE_MODULE_PATH ${GATB_CORE_HOME}/cmake)
################################################################################
# SUPPORTED KMER SIZES
################################################################################
# One can uncomment this line and set the wanted values
#set (KSIZE_LIST "32 64 96 128 160 192 224 256")
################################################################################
# THIRD PARTIES
################################################################################
# We don't want to install some GATB-CORE artifacts
SET (GATB_CORE_EXCLUDE_TOOLS 1)
SET (GATB_CORE_EXCLUDE_TESTS 1)
SET (GATB_CORE_EXCLUDE_EXAMPLES 1)
# GATB CORE
include (GatbCore)
################################################################################
# TOOLS
################################################################################
#ADD_SUBDIRECTORY(tools)
add_definitions (${gatb-core-flags})
# we define the files to be compiled
set (PROGRAM_SOURCE_DIR ${PROJECT_SOURCE_DIR}/src)
include_directories (${PROGRAM_SOURCE_DIR} ${gatb-core-includes})
set(CMAKE_RUNTIME_OUTPUT_DIRECTORY ${CMAKE_BINARY_DIR}/bin)
# we define the artifact to be built: the project binary
add_executable (${PROJECT_NAME} src/main.cpp ${ProjectFiles})
# we define which libraries to be linked with project binary
target_link_libraries (${PROJECT_NAME} ${gatb-core-libraries})
################################################################################
# Packaging
################################################################################
# We set the version number
SET (CPACK_PACKAGE_DESCRIPTION_SUMMARY "gatb-tool ${PROJECT_NAME}")
SET (CPACK_PACKAGE_VENDOR "Genscale team (INRIA)")
SET (CPACK_PACKAGE_VERSION_MAJOR "${gatb-tool_VERSION_MAJOR}")
SET (CPACK_PACKAGE_VERSION_MINOR "${gatb-tool_VERSION_MINOR}")
SET (CPACK_PACKAGE_VERSION_PATCH "${gatb-tool_VERSION_PATCH}")
SET (CPACK_PACKAGE_VERSION "${gatb-tool-version}")
# We set the kind of archive
SET (CPACK_GENERATOR "TGZ")
SET (CPACK_SOURCE_GENERATOR "TGZ")
# Packaging the source ; we ignore unwanted files
SET (CPACK_SOURCE_IGNORE_FILES
"^${PROJECT_SOURCE_DIR}/build/"
"^${GATB_CORE_HOME}/.project"
"^${GATB_CORE_HOME}/.gitignore"
"^${GATB_CORE_HOME}/doc"
"^${GATB_CORE_HOME}/DELIVERY.md"
"^${PROJECT_SOURCE_DIR}/\\.gitmodules" ;
"^${PROJECT_SOURCE_DIR}/\\.gitignore";
"^${PROJECT_SOURCE_DIR}/\\.git/"
)
# Packaging the binary ; we want to include some additional files
INSTALL (FILES ${CMAKE_CURRENT_SOURCE_DIR}/LICENCE DESTINATION .)
INSTALL (FILES ${CMAKE_CURRENT_SOURCE_DIR}/thirdparty/THIRDPARTIES.md DESTINATION .)
include (CPack)