Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Impossible to obtain results with CrisprCasTyper #56

Open
Nabila44300 opened this issue Sep 16, 2024 · 6 comments
Open

Impossible to obtain results with CrisprCasTyper #56

Nabila44300 opened this issue Sep 16, 2024 · 6 comments

Comments

@Nabila44300
Copy link

Hello

In July I succeded in obtaining results of CRISPR Cas identification with several metagenomes however today I was not able any results whatever the sequences that I used, time was running without success. Could you please help me?
many thanks
Nabila

@Russel88
Copy link
Owner

Hi
I need some more information to able to help.
Are you using the webserver or a local installation. If you use a local installation, what version have you installed?
Did you run it with the same options/installation in July as you did today?
Do you see any errors/warnings or is the program running to completion just with empty results?
Do you have any example data that has previously worked, but is not working now.

@Nabila44300
Copy link
Author

Hello
Many thanks for your replay.
I am using the web version, and the default parameters. I have used new sequences to detect Cas and CRISPR sequences, however the time was running but never stop. So I have tried with the sequences that I have alteady analysed in July and I obtained the same results. I do not understand...

@Nabila44300
Copy link
Author

"The same results" meaning the time is running and never stop. But I did not receive the same results that in July

@Russel88
Copy link
Owner

Russel88 commented Sep 17, 2024

Do you have a job ID?

@Nabila44300
Copy link
Author

Nabila44300 commented Sep 17, 2024 via email

@Russel88
Copy link
Owner

I can see that job has finished, but hasn't found any CRISPR-cas operons:
https://crisprcastyper.crispr.dk/#/jobs/94k3k3kf8x

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants