From 0121991f00da41a35828107fbdff1acd11e61ce9 Mon Sep 17 00:00:00 2001 From: "pre-commit-ci[bot]" <66853113+pre-commit-ci[bot]@users.noreply.github.com> Date: Tue, 2 Jul 2024 00:39:21 +0000 Subject: [PATCH 1/5] MAINT: update pip constraints and pre-commit MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit updates: - [github.com/astral-sh/ruff-pre-commit: v0.3.5 → v0.5.0](https://github.com/astral-sh/ruff-pre-commit/compare/v0.3.5...v0.5.0) - [github.com/pre-commit/pre-commit-hooks: v4.5.0 → v4.6.0](https://github.com/pre-commit/pre-commit-hooks/compare/v4.5.0...v4.6.0) - [github.com/ComPWA/policy: 0.3.5 → 0.3.9](https://github.com/ComPWA/policy/compare/0.3.5...0.3.9) - [github.com/streetsidesoftware/cspell-cli: v8.6.1 → v8.9.0](https://github.com/streetsidesoftware/cspell-cli/compare/v8.6.1...v8.9.0) - [github.com/ComPWA/mirrors-pyright: v1.1.357 → v1.1.369](https://github.com/ComPWA/mirrors-pyright/compare/v1.1.357...v1.1.369) --- .pre-commit-config.yaml | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index ec569e2..801e712 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -39,7 +39,7 @@ repos: metadata.vscode - repo: https://github.com/astral-sh/ruff-pre-commit - rev: v0.3.5 + rev: v0.5.0 hooks: - id: ruff args: [--fix] @@ -48,7 +48,7 @@ repos: types_or: [python, pyi, jupyter] - repo: https://github.com/pre-commit/pre-commit-hooks - rev: v4.5.0 + rev: v4.6.0 hooks: - id: check-ast - id: check-case-conflict @@ -83,7 +83,7 @@ repos: - --in-place - repo: https://github.com/ComPWA/policy - rev: 0.3.5 + rev: 0.3.9 hooks: - id: check-dev-files args: @@ -94,7 +94,7 @@ repos: - --repo-title=Pawian Tools - repo: https://github.com/streetsidesoftware/cspell-cli - rev: v8.6.1 + rev: v8.9.0 hooks: - id: cspell @@ -120,6 +120,6 @@ repos: - python - repo: https://github.com/ComPWA/mirrors-pyright - rev: v1.1.357 + rev: v1.1.369 hooks: - id: pyright From d15c3f27630636a2b0eb0a4b424bdaf8a94d6b94 Mon Sep 17 00:00:00 2001 From: GitHub Date: Tue, 2 Jul 2024 00:40:15 +0000 Subject: [PATCH 2/5] MAINT: update pip constraints and pre-commit --- .constraints/py3.10.txt | 173 ++++++++++++++++++++-------------------- .constraints/py3.11.txt | 171 ++++++++++++++++++++------------------- .constraints/py3.12.txt | 171 ++++++++++++++++++++------------------- .constraints/py3.7.txt | 44 +++++----- .constraints/py3.8.txt | 142 ++++++++++++++++----------------- .constraints/py3.9.txt | 171 ++++++++++++++++++++------------------- 6 files changed, 442 insertions(+), 430 deletions(-) diff --git a/.constraints/py3.10.txt b/.constraints/py3.10.txt index f2f6304..ccf46e7 100644 --- a/.constraints/py3.10.txt +++ b/.constraints/py3.10.txt @@ -1,23 +1,23 @@ # This file was autogenerated by uv via the following command: # uv pip compile pyproject.toml -o .constraints/py3.10.txt --all-extras --no-annotate --python-version=3.10 --no-emit-package setuptools -accessible-pygments==0.0.4 +accessible-pygments==0.0.5 alabaster==0.7.16 -anyio==4.3.0 +anyio==4.4.0 argon2-cffi==23.1.0 argon2-cffi-bindings==21.2.0 arrow==1.3.0 asttokens==2.4.1 async-lru==2.0.4 attrs==23.2.0 -awkward==2.6.3 -awkward-cpp==32 -babel==2.14.0 +awkward==2.6.6 +awkward-cpp==35 +babel==2.15.0 beautifulsoup4==4.12.3 -black==24.3.0 +black==24.4.2 bleach==6.1.0 cachetools==5.3.3 cattrs==23.2.3 -certifi==2024.2.2 +certifi==2024.6.2 cffi==1.16.0 cfgv==3.4.0 chardet==5.2.0 @@ -26,137 +26,136 @@ click==8.1.7 colorama==0.4.6 comm==0.2.2 contourpy==1.2.1 -coverage==7.4.4 +coverage==7.5.4 cramjam==2.8.3 cycler==0.12.1 -debugpy==1.8.1 +debugpy==1.8.2 decorator==5.1.1 defusedxml==0.7.1 distlib==0.3.8 docstring-to-markdown==0.15 -docutils==0.20.1 -exceptiongroup==1.2.0 -execnet==2.1.0 +docutils==0.21.2 +exceptiongroup==1.2.1 +execnet==2.1.1 executing==2.0.1 -fastjsonschema==2.19.1 -filelock==3.13.3 -fonttools==4.51.0 +fastjsonschema==2.20.0 +filelock==3.15.4 +fonttools==4.53.0 fqdn==1.5.1 -fsspec==2024.3.1 +fsspec==2024.6.1 gitdb==4.0.11 gitpython==3.1.43 -gprof2dot==2022.7.29 +gprof2dot==2024.6.6 greenlet==3.0.3 h11==0.14.0 httpcore==1.0.5 httpx==0.27.0 -identify==2.5.35 -idna==3.6 +identify==2.5.36 +idna==3.7 imagesize==1.4.1 -importlib-metadata==7.1.0 +importlib-metadata==8.0.0 iniconfig==2.0.0 -ipykernel==6.29.4 -ipython==8.23.0 -ipywidgets==8.1.2 +ipykernel==6.29.5 +ipython==8.26.0 +ipywidgets==8.1.3 isoduration==20.11.0 isort==5.13.2 jedi==0.19.1 -jinja2==3.1.3 -json5==0.9.24 -jsonpointer==2.4 -jsonschema==4.21.1 +jinja2==3.1.4 +json5==0.9.25 +jsonpointer==3.0.0 +jsonschema==4.22.0 jsonschema-specifications==2023.12.1 jupyter-cache==1.0.0 -jupyter-client==8.6.1 +jupyter-client==8.6.2 jupyter-core==5.7.2 jupyter-events==0.10.0 -jupyter-lsp==2.2.4 -jupyter-server==2.13.0 +jupyter-lsp==2.2.5 +jupyter-server==2.14.1 jupyter-server-mathjax==0.2.6 jupyter-server-terminals==0.5.3 -jupyterlab==4.1.5 +jupyterlab==4.2.3 jupyterlab-code-formatter==2.2.1 -jupyterlab-git==0.50.0 +jupyterlab-git==0.50.1 jupyterlab-lsp==5.1.0 -jupyterlab-myst==2.3.2 +jupyterlab-myst==2.4.2 jupyterlab-pygments==0.3.0 -jupyterlab-server==2.25.4 -jupyterlab-widgets==3.0.10 +jupyterlab-server==2.27.2 +jupyterlab-widgets==3.0.11 kiwisolver==1.4.5 -livereload==2.6.3 lsprotocol==2023.0.1 markdown-it-py==3.0.0 markupsafe==2.1.5 -matplotlib==3.8.4 -matplotlib-inline==0.1.6 -mdit-py-plugins==0.4.0 +matplotlib==3.9.0 +matplotlib-inline==0.1.7 +mdit-py-plugins==0.4.1 mdurl==0.1.2 mistune==3.0.2 -mypy==1.9.0 +mypy==1.10.1 mypy-extensions==1.0.0 -myst-nb==1.0.0 -myst-parser==2.0.0 +myst-nb==1.1.1 +myst-parser==3.0.1 nbclient==0.6.8 -nbconvert==7.16.3 +nbconvert==7.16.4 nbdime==4.0.1 nbformat==5.10.4 -nbmake==1.5.3 +nbmake==1.5.4 nest-asyncio==1.6.0 -nodeenv==1.8.0 +nodeenv==1.9.1 notebook-shim==0.2.4 -numpy==1.26.4 +numpy==2.0.0 overrides==7.7.0 -packaging==24.0 -pandas==2.2.1 +packaging==24.1 +pandas==2.2.2 pandocfilters==1.5.1 parso==0.8.4 pathspec==0.12.1 pexpect==4.9.0 -pillow==10.3.0 -platformdirs==4.2.0 -pluggy==1.4.0 -pre-commit==3.7.0 +pillow==10.4.0 +platformdirs==4.2.2 +pluggy==1.5.0 +pre-commit==3.7.1 prometheus-client==0.20.0 -prompt-toolkit==3.0.43 -psutil==5.9.8 +prompt-toolkit==3.0.47 +psutil==6.0.0 ptyprocess==0.7.0 pure-eval==0.2.2 pycparser==2.22 -pydata-sphinx-theme==0.15.2 -pygments==2.17.2 +pydata-sphinx-theme==0.15.4 +pygments==2.18.0 pyparsing==3.1.2 -pyproject-api==1.6.1 -pytest==8.1.1 +pyproject-api==1.7.1 +pytest==8.2.2 pytest-cov==5.0.0 pytest-profiling==1.7.0 -pytest-xdist==3.5.0 +pytest-xdist==3.6.1 python-dateutil==2.9.0.post0 python-json-logger==2.0.7 python-lsp-jsonrpc==1.1.2 -python-lsp-ruff==2.2.0 +python-lsp-ruff==2.2.1 python-lsp-server==1.11.0 pytoolconfig==1.3.1 pytz==2024.1 pyyaml==6.0.1 -pyzmq==25.1.2 -referencing==0.34.0 -requests==2.31.0 +pyzmq==26.0.3 +referencing==0.35.1 +requests==2.32.3 rfc3339-validator==0.1.4 rfc3986-validator==0.1.1 rope==1.13.0 -rpds-py==0.18.0 -ruff==0.3.5 -send2trash==1.8.2 +rpds-py==0.18.1 +ruff==0.5.0 +send2trash==1.8.3 six==1.16.0 smmap==5.0.1 sniffio==1.3.1 snowballstemmer==2.2.0 soupsieve==2.5 -sphinx==7.2.6 -sphinx-api-relink==0.0.8 -sphinx-autobuild==2024.2.4 -sphinx-book-theme==1.1.2 -sphinx-codeautolink==0.15.0 +sphinx==7.3.7 +sphinx-api-relink==0.0.9 +sphinx-autobuild==2024.4.16 +sphinx-book-theme==1.1.3 +sphinx-codeautolink==0.15.2 sphinx-copybutton==0.5.2 sphinx-thebe==0.3.1 sphinx-togglebutton==0.3.2 @@ -166,30 +165,34 @@ sphinxcontrib-htmlhelp==2.0.5 sphinxcontrib-jsmath==1.0.1 sphinxcontrib-qthelp==1.0.7 sphinxcontrib-serializinghtml==1.1.10 -sqlalchemy==2.0.29 +sqlalchemy==2.0.31 stack-data==0.6.3 +starlette==0.37.2 tabulate==0.9.0 terminado==0.18.1 -tinycss2==1.2.1 +tinycss2==1.3.0 tomli==2.0.1 -tornado==6.4 -tox==4.14.2 -traitlets==5.14.2 +tornado==6.4.1 +tox==4.15.1 +traitlets==5.14.3 types-python-dateutil==2.9.0.20240316 -typing-extensions==4.11.0 +typing-extensions==4.12.2 tzdata==2024.1 -ujson==5.9.0 -uproot==5.3.2 +ujson==5.10.0 +uproot==5.3.9 uri-template==1.3.0 -urllib3==2.2.1 -virtualenv==20.25.1 +urllib3==2.2.2 +uvicorn==0.30.1 +virtualenv==20.26.3 +watchfiles==0.22.0 wcwidth==0.2.13 -webcolors==1.13 +webcolors==24.6.0 webencodings==0.5.1 -websocket-client==1.7.0 +websocket-client==1.8.0 +websockets==12.0 wheel==0.43.0 -widgetsnbextension==4.0.10 -zipp==3.18.1 +widgetsnbextension==4.0.11 +zipp==3.19.2 # The following packages were excluded from the output: # setuptools diff --git a/.constraints/py3.11.txt b/.constraints/py3.11.txt index 05a510c..33ced71 100644 --- a/.constraints/py3.11.txt +++ b/.constraints/py3.11.txt @@ -1,23 +1,23 @@ # This file was autogenerated by uv via the following command: # uv pip compile pyproject.toml -o .constraints/py3.11.txt --all-extras --no-annotate --python-version=3.11 --no-emit-package setuptools -accessible-pygments==0.0.4 +accessible-pygments==0.0.5 alabaster==0.7.16 -anyio==4.3.0 +anyio==4.4.0 argon2-cffi==23.1.0 argon2-cffi-bindings==21.2.0 arrow==1.3.0 asttokens==2.4.1 async-lru==2.0.4 attrs==23.2.0 -awkward==2.6.3 -awkward-cpp==32 -babel==2.14.0 +awkward==2.6.6 +awkward-cpp==35 +babel==2.15.0 beautifulsoup4==4.12.3 -black==24.3.0 +black==24.4.2 bleach==6.1.0 cachetools==5.3.3 cattrs==23.2.3 -certifi==2024.2.2 +certifi==2024.6.2 cffi==1.16.0 cfgv==3.4.0 chardet==5.2.0 @@ -26,136 +26,135 @@ click==8.1.7 colorama==0.4.6 comm==0.2.2 contourpy==1.2.1 -coverage==7.4.4 +coverage==7.5.4 cramjam==2.8.3 cycler==0.12.1 -debugpy==1.8.1 +debugpy==1.8.2 decorator==5.1.1 defusedxml==0.7.1 distlib==0.3.8 docstring-to-markdown==0.15 -docutils==0.20.1 -execnet==2.1.0 +docutils==0.21.2 +execnet==2.1.1 executing==2.0.1 -fastjsonschema==2.19.1 -filelock==3.13.3 -fonttools==4.51.0 +fastjsonschema==2.20.0 +filelock==3.15.4 +fonttools==4.53.0 fqdn==1.5.1 -fsspec==2024.3.1 +fsspec==2024.6.1 gitdb==4.0.11 gitpython==3.1.43 -gprof2dot==2022.7.29 +gprof2dot==2024.6.6 greenlet==3.0.3 h11==0.14.0 httpcore==1.0.5 httpx==0.27.0 -identify==2.5.35 -idna==3.6 +identify==2.5.36 +idna==3.7 imagesize==1.4.1 -importlib-metadata==7.1.0 +importlib-metadata==8.0.0 iniconfig==2.0.0 -ipykernel==6.29.4 -ipython==8.23.0 -ipywidgets==8.1.2 +ipykernel==6.29.5 +ipython==8.26.0 +ipywidgets==8.1.3 isoduration==20.11.0 isort==5.13.2 jedi==0.19.1 -jinja2==3.1.3 -json5==0.9.24 -jsonpointer==2.4 -jsonschema==4.21.1 +jinja2==3.1.4 +json5==0.9.25 +jsonpointer==3.0.0 +jsonschema==4.22.0 jsonschema-specifications==2023.12.1 jupyter-cache==1.0.0 -jupyter-client==8.6.1 +jupyter-client==8.6.2 jupyter-core==5.7.2 jupyter-events==0.10.0 -jupyter-lsp==2.2.4 -jupyter-server==2.13.0 +jupyter-lsp==2.2.5 +jupyter-server==2.14.1 jupyter-server-mathjax==0.2.6 jupyter-server-terminals==0.5.3 -jupyterlab==4.1.5 +jupyterlab==4.2.3 jupyterlab-code-formatter==2.2.1 -jupyterlab-git==0.50.0 +jupyterlab-git==0.50.1 jupyterlab-lsp==5.1.0 -jupyterlab-myst==2.3.2 +jupyterlab-myst==2.4.2 jupyterlab-pygments==0.3.0 -jupyterlab-server==2.25.4 -jupyterlab-widgets==3.0.10 +jupyterlab-server==2.27.2 +jupyterlab-widgets==3.0.11 kiwisolver==1.4.5 -livereload==2.6.3 lsprotocol==2023.0.1 markdown-it-py==3.0.0 markupsafe==2.1.5 -matplotlib==3.8.4 -matplotlib-inline==0.1.6 -mdit-py-plugins==0.4.0 +matplotlib==3.9.0 +matplotlib-inline==0.1.7 +mdit-py-plugins==0.4.1 mdurl==0.1.2 mistune==3.0.2 -mypy==1.9.0 +mypy==1.10.1 mypy-extensions==1.0.0 -myst-nb==1.0.0 -myst-parser==2.0.0 +myst-nb==1.1.1 +myst-parser==3.0.1 nbclient==0.6.8 -nbconvert==7.16.3 +nbconvert==7.16.4 nbdime==4.0.1 nbformat==5.10.4 -nbmake==1.5.3 +nbmake==1.5.4 nest-asyncio==1.6.0 -nodeenv==1.8.0 +nodeenv==1.9.1 notebook-shim==0.2.4 -numpy==1.26.4 +numpy==2.0.0 overrides==7.7.0 -packaging==24.0 -pandas==2.2.1 +packaging==24.1 +pandas==2.2.2 pandocfilters==1.5.1 parso==0.8.4 pathspec==0.12.1 pexpect==4.9.0 -pillow==10.3.0 -platformdirs==4.2.0 -pluggy==1.4.0 -pre-commit==3.7.0 +pillow==10.4.0 +platformdirs==4.2.2 +pluggy==1.5.0 +pre-commit==3.7.1 prometheus-client==0.20.0 -prompt-toolkit==3.0.43 -psutil==5.9.8 +prompt-toolkit==3.0.47 +psutil==6.0.0 ptyprocess==0.7.0 pure-eval==0.2.2 pycparser==2.22 -pydata-sphinx-theme==0.15.2 -pygments==2.17.2 +pydata-sphinx-theme==0.15.4 +pygments==2.18.0 pyparsing==3.1.2 -pyproject-api==1.6.1 -pytest==8.1.1 +pyproject-api==1.7.1 +pytest==8.2.2 pytest-cov==5.0.0 pytest-profiling==1.7.0 -pytest-xdist==3.5.0 +pytest-xdist==3.6.1 python-dateutil==2.9.0.post0 python-json-logger==2.0.7 python-lsp-jsonrpc==1.1.2 -python-lsp-ruff==2.2.0 +python-lsp-ruff==2.2.1 python-lsp-server==1.11.0 pytoolconfig==1.3.1 pytz==2024.1 pyyaml==6.0.1 -pyzmq==25.1.2 -referencing==0.34.0 -requests==2.31.0 +pyzmq==26.0.3 +referencing==0.35.1 +requests==2.32.3 rfc3339-validator==0.1.4 rfc3986-validator==0.1.1 rope==1.13.0 -rpds-py==0.18.0 -ruff==0.3.5 -send2trash==1.8.2 +rpds-py==0.18.1 +ruff==0.5.0 +send2trash==1.8.3 six==1.16.0 smmap==5.0.1 sniffio==1.3.1 snowballstemmer==2.2.0 soupsieve==2.5 -sphinx==7.2.6 -sphinx-api-relink==0.0.8 -sphinx-autobuild==2024.2.4 -sphinx-book-theme==1.1.2 -sphinx-codeautolink==0.15.0 +sphinx==7.3.7 +sphinx-api-relink==0.0.9 +sphinx-autobuild==2024.4.16 +sphinx-book-theme==1.1.3 +sphinx-codeautolink==0.15.2 sphinx-copybutton==0.5.2 sphinx-thebe==0.3.1 sphinx-togglebutton==0.3.2 @@ -165,29 +164,33 @@ sphinxcontrib-htmlhelp==2.0.5 sphinxcontrib-jsmath==1.0.1 sphinxcontrib-qthelp==1.0.7 sphinxcontrib-serializinghtml==1.1.10 -sqlalchemy==2.0.29 +sqlalchemy==2.0.31 stack-data==0.6.3 +starlette==0.37.2 tabulate==0.9.0 terminado==0.18.1 -tinycss2==1.2.1 -tornado==6.4 -tox==4.14.2 -traitlets==5.14.2 +tinycss2==1.3.0 +tornado==6.4.1 +tox==4.15.1 +traitlets==5.14.3 types-python-dateutil==2.9.0.20240316 -typing-extensions==4.11.0 +typing-extensions==4.12.2 tzdata==2024.1 -ujson==5.9.0 -uproot==5.3.2 +ujson==5.10.0 +uproot==5.3.9 uri-template==1.3.0 -urllib3==2.2.1 -virtualenv==20.25.1 +urllib3==2.2.2 +uvicorn==0.30.1 +virtualenv==20.26.3 +watchfiles==0.22.0 wcwidth==0.2.13 -webcolors==1.13 +webcolors==24.6.0 webencodings==0.5.1 -websocket-client==1.7.0 +websocket-client==1.8.0 +websockets==12.0 wheel==0.43.0 -widgetsnbextension==4.0.10 -zipp==3.18.1 +widgetsnbextension==4.0.11 +zipp==3.19.2 # The following packages were excluded from the output: # setuptools diff --git a/.constraints/py3.12.txt b/.constraints/py3.12.txt index e0b08f8..6a93e2d 100644 --- a/.constraints/py3.12.txt +++ b/.constraints/py3.12.txt @@ -1,23 +1,23 @@ # This file was autogenerated by uv via the following command: # uv pip compile pyproject.toml -o .constraints/py3.12.txt --all-extras --no-annotate --python-version=3.12 --no-emit-package setuptools -accessible-pygments==0.0.4 +accessible-pygments==0.0.5 alabaster==0.7.16 -anyio==4.3.0 +anyio==4.4.0 argon2-cffi==23.1.0 argon2-cffi-bindings==21.2.0 arrow==1.3.0 asttokens==2.4.1 async-lru==2.0.4 attrs==23.2.0 -awkward==2.6.3 -awkward-cpp==32 -babel==2.14.0 +awkward==2.6.6 +awkward-cpp==35 +babel==2.15.0 beautifulsoup4==4.12.3 -black==24.3.0 +black==24.4.2 bleach==6.1.0 cachetools==5.3.3 cattrs==23.2.3 -certifi==2024.2.2 +certifi==2024.6.2 cffi==1.16.0 cfgv==3.4.0 chardet==5.2.0 @@ -26,136 +26,135 @@ click==8.1.7 colorama==0.4.6 comm==0.2.2 contourpy==1.2.1 -coverage==7.4.4 +coverage==7.5.4 cramjam==2.8.3 cycler==0.12.1 -debugpy==1.8.1 +debugpy==1.8.2 decorator==5.1.1 defusedxml==0.7.1 distlib==0.3.8 docstring-to-markdown==0.15 -docutils==0.20.1 -execnet==2.1.0 +docutils==0.21.2 +execnet==2.1.1 executing==2.0.1 -fastjsonschema==2.19.1 -filelock==3.13.3 -fonttools==4.51.0 +fastjsonschema==2.20.0 +filelock==3.15.4 +fonttools==4.53.0 fqdn==1.5.1 -fsspec==2024.3.1 +fsspec==2024.6.1 gitdb==4.0.11 gitpython==3.1.43 -gprof2dot==2022.7.29 +gprof2dot==2024.6.6 greenlet==3.0.3 h11==0.14.0 httpcore==1.0.5 httpx==0.27.0 -identify==2.5.35 -idna==3.6 +identify==2.5.36 +idna==3.7 imagesize==1.4.1 -importlib-metadata==7.1.0 +importlib-metadata==8.0.0 iniconfig==2.0.0 -ipykernel==6.29.4 -ipython==8.23.0 -ipywidgets==8.1.2 +ipykernel==6.29.5 +ipython==8.26.0 +ipywidgets==8.1.3 isoduration==20.11.0 isort==5.13.2 jedi==0.19.1 -jinja2==3.1.3 -json5==0.9.24 -jsonpointer==2.4 -jsonschema==4.21.1 +jinja2==3.1.4 +json5==0.9.25 +jsonpointer==3.0.0 +jsonschema==4.22.0 jsonschema-specifications==2023.12.1 jupyter-cache==1.0.0 -jupyter-client==8.6.1 +jupyter-client==8.6.2 jupyter-core==5.7.2 jupyter-events==0.10.0 -jupyter-lsp==2.2.4 -jupyter-server==2.13.0 +jupyter-lsp==2.2.5 +jupyter-server==2.14.1 jupyter-server-mathjax==0.2.6 jupyter-server-terminals==0.5.3 -jupyterlab==4.1.5 +jupyterlab==4.2.3 jupyterlab-code-formatter==2.2.1 -jupyterlab-git==0.50.0 +jupyterlab-git==0.50.1 jupyterlab-lsp==5.1.0 -jupyterlab-myst==2.3.2 +jupyterlab-myst==2.4.2 jupyterlab-pygments==0.3.0 -jupyterlab-server==2.25.4 -jupyterlab-widgets==3.0.10 +jupyterlab-server==2.27.2 +jupyterlab-widgets==3.0.11 kiwisolver==1.4.5 -livereload==2.6.3 lsprotocol==2023.0.1 markdown-it-py==3.0.0 markupsafe==2.1.5 -matplotlib==3.8.4 -matplotlib-inline==0.1.6 -mdit-py-plugins==0.4.0 +matplotlib==3.9.0 +matplotlib-inline==0.1.7 +mdit-py-plugins==0.4.1 mdurl==0.1.2 mistune==3.0.2 -mypy==1.9.0 +mypy==1.10.1 mypy-extensions==1.0.0 -myst-nb==1.0.0 -myst-parser==2.0.0 +myst-nb==1.1.1 +myst-parser==3.0.1 nbclient==0.6.8 -nbconvert==7.16.3 +nbconvert==7.16.4 nbdime==4.0.1 nbformat==5.10.4 -nbmake==1.5.3 +nbmake==1.5.4 nest-asyncio==1.6.0 -nodeenv==1.8.0 +nodeenv==1.9.1 notebook-shim==0.2.4 -numpy==1.26.4 +numpy==2.0.0 overrides==7.7.0 -packaging==24.0 -pandas==2.2.1 +packaging==24.1 +pandas==2.2.2 pandocfilters==1.5.1 parso==0.8.4 pathspec==0.12.1 pexpect==4.9.0 -pillow==10.3.0 -platformdirs==4.2.0 -pluggy==1.4.0 -pre-commit==3.7.0 +pillow==10.4.0 +platformdirs==4.2.2 +pluggy==1.5.0 +pre-commit==3.7.1 prometheus-client==0.20.0 -prompt-toolkit==3.0.43 -psutil==5.9.8 +prompt-toolkit==3.0.47 +psutil==6.0.0 ptyprocess==0.7.0 pure-eval==0.2.2 pycparser==2.22 -pydata-sphinx-theme==0.15.2 -pygments==2.17.2 +pydata-sphinx-theme==0.15.4 +pygments==2.18.0 pyparsing==3.1.2 -pyproject-api==1.6.1 -pytest==8.1.1 +pyproject-api==1.7.1 +pytest==8.2.2 pytest-cov==5.0.0 pytest-profiling==1.7.0 -pytest-xdist==3.5.0 +pytest-xdist==3.6.1 python-dateutil==2.9.0.post0 python-json-logger==2.0.7 python-lsp-jsonrpc==1.1.2 -python-lsp-ruff==2.2.0 +python-lsp-ruff==2.2.1 python-lsp-server==1.11.0 pytoolconfig==1.3.1 pytz==2024.1 pyyaml==6.0.1 -pyzmq==25.1.2 -referencing==0.34.0 -requests==2.31.0 +pyzmq==26.0.3 +referencing==0.35.1 +requests==2.32.3 rfc3339-validator==0.1.4 rfc3986-validator==0.1.1 rope==1.13.0 -rpds-py==0.18.0 -ruff==0.3.5 -send2trash==1.8.2 +rpds-py==0.18.1 +ruff==0.5.0 +send2trash==1.8.3 six==1.16.0 smmap==5.0.1 sniffio==1.3.1 snowballstemmer==2.2.0 soupsieve==2.5 -sphinx==7.2.6 -sphinx-api-relink==0.0.8 -sphinx-autobuild==2024.2.4 -sphinx-book-theme==1.1.2 -sphinx-codeautolink==0.15.0 +sphinx==7.3.7 +sphinx-api-relink==0.0.9 +sphinx-autobuild==2024.4.16 +sphinx-book-theme==1.1.3 +sphinx-codeautolink==0.15.2 sphinx-copybutton==0.5.2 sphinx-thebe==0.3.1 sphinx-togglebutton==0.3.2 @@ -165,29 +164,33 @@ sphinxcontrib-htmlhelp==2.0.5 sphinxcontrib-jsmath==1.0.1 sphinxcontrib-qthelp==1.0.7 sphinxcontrib-serializinghtml==1.1.10 -sqlalchemy==2.0.29 +sqlalchemy==2.0.31 stack-data==0.6.3 +starlette==0.37.2 tabulate==0.9.0 terminado==0.18.1 -tinycss2==1.2.1 -tornado==6.4 -tox==4.14.2 -traitlets==5.14.2 +tinycss2==1.3.0 +tornado==6.4.1 +tox==4.15.1 +traitlets==5.14.3 types-python-dateutil==2.9.0.20240316 -typing-extensions==4.11.0 +typing-extensions==4.12.2 tzdata==2024.1 -ujson==5.9.0 -uproot==5.3.2 +ujson==5.10.0 +uproot==5.3.9 uri-template==1.3.0 -urllib3==2.2.1 -virtualenv==20.25.1 +urllib3==2.2.2 +uvicorn==0.30.1 +virtualenv==20.26.3 +watchfiles==0.22.0 wcwidth==0.2.13 -webcolors==1.13 +webcolors==24.6.0 webencodings==0.5.1 -websocket-client==1.7.0 +websocket-client==1.8.0 +websockets==12.0 wheel==0.43.0 -widgetsnbextension==4.0.10 -zipp==3.18.1 +widgetsnbextension==4.0.11 +zipp==3.19.2 # The following packages were excluded from the output: # setuptools diff --git a/.constraints/py3.7.txt b/.constraints/py3.7.txt index a1deedc..b36b201 100644 --- a/.constraints/py3.7.txt +++ b/.constraints/py3.7.txt @@ -19,7 +19,7 @@ bleach==6.0.0 cached-property==1.5.2 cachetools==5.3.3 cattrs==23.1.2 -certifi==2024.2.2 +certifi==2024.6.2 cffi==1.15.1 cfgv==3.3.1 chardet==5.2.0 @@ -36,9 +36,9 @@ distlib==0.3.8 docstring-to-markdown==0.15 docutils==0.19 entrypoints==0.4 -exceptiongroup==1.2.0 +exceptiongroup==1.2.1 execnet==2.0.2 -fastjsonschema==2.19.1 +fastjsonschema==2.20.0 filelock==3.12.2 fonttools==4.38.0 fqdn==1.5.1 @@ -47,7 +47,7 @@ gitpython==3.1.43 gprof2dot==2022.7.29 greenlet==3.0.3 identify==2.5.24 -idna==3.6 +idna==3.7 imagesize==1.4.1 importlib-metadata==6.7.0 importlib-resources==5.12.0 @@ -55,13 +55,13 @@ iniconfig==2.0.0 ipykernel==6.16.2 ipython==7.34.0 ipython-genutils==0.2.0 -ipywidgets==8.1.2 +ipywidgets==8.1.3 isoduration==20.11.0 isort==5.11.5 jedi==0.18.2 -jinja2==3.1.3 +jinja2==3.1.4 json5==0.9.16 -jsonpointer==2.4 +jsonpointer==3.0.0 jsonschema==4.17.3 jupyter-cache==0.5.0 jupyter-client==7.4.9 @@ -69,7 +69,7 @@ jupyter-core==4.12.0 jupyter-events==0.6.3 jupyter-lsp==1.5.1 jupyter-server==1.24.0 -jupyter-server-fileid==0.9.1 +jupyter-server-fileid==0.9.2 jupyter-server-mathjax==0.2.6 jupyter-server-ydoc==0.8.0 jupyter-ydoc==0.2.5 @@ -80,9 +80,9 @@ jupyterlab-lsp==3.10.2 jupyterlab-myst==1.2.0 jupyterlab-pygments==0.2.2 jupyterlab-server==2.24.0 -jupyterlab-widgets==3.0.10 +jupyterlab-widgets==3.0.11 kiwisolver==1.4.5 -livereload==2.6.3 +livereload==2.7.0 lsprotocol==2023.0.1 markdown-it-py==2.2.0 markupsafe==2.1.5 @@ -95,15 +95,15 @@ mypy==1.4.1 mypy-extensions==1.0.0 myst-nb==0.17.2 myst-parser==0.18.1 -nbclassic==1.0.0 +nbclassic==1.1.0 nbclient==0.5.13 nbconvert==7.6.0 nbdime==3.2.1 nbformat==5.8.0 nbmake==1.3.0 nest-asyncio==1.6.0 -nodeenv==1.8.0 -notebook==6.5.6 +nodeenv==1.9.1 +notebook==6.5.7 notebook-shim==0.2.4 numpy==1.21.6 packaging==24.0 @@ -119,11 +119,11 @@ platformdirs==4.0.0 pluggy==1.2.0 pre-commit==2.21.0 prometheus-client==0.17.1 -prompt-toolkit==3.0.43 -psutil==5.9.8 +prompt-toolkit==3.0.47 +psutil==6.0.0 ptyprocess==0.7.0 pycparser==2.21 -pydantic==1.10.15 +pydantic==1.10.17 pydata-sphinx-theme==0.13.3 pygments==2.17.2 pyparsing==3.1.2 @@ -141,23 +141,23 @@ python-lsp-server==1.7.4 pytoolconfig==1.3.0 pytz==2024.1 pyyaml==6.0.1 -pyzmq==24.0.1 +pyzmq==26.0.3 requests==2.31.0 rfc3339-validator==0.1.4 rfc3986-validator==0.1.1 rope==1.9.0 ruff==0.1.15 -send2trash==1.8.2 +send2trash==1.8.3 six==1.16.0 smmap==5.0.1 sniffio==1.3.1 snowballstemmer==2.2.0 soupsieve==2.4.1 sphinx==5.3.0 -sphinx-api-relink==0.0.8 +sphinx-api-relink==0.0.9 sphinx-autobuild==2021.3.14 sphinx-book-theme==1.0.1 -sphinx-codeautolink==0.15.0 +sphinx-codeautolink==0.15.2 sphinx-copybutton==0.5.2 sphinx-thebe==0.2.1 sphinx-togglebutton==0.3.2 @@ -181,13 +181,13 @@ ujson==5.7.0 uproot==5.0.13 uri-template==1.3.0 urllib3==2.0.7 -virtualenv==20.25.1 +virtualenv==20.26.3 wcwidth==0.2.13 webcolors==1.13 webencodings==0.5.1 websocket-client==1.6.1 wheel==0.42.0 -widgetsnbextension==4.0.10 +widgetsnbextension==4.0.11 y-py==0.6.2 ypy-websocket==0.8.4 zipp==3.15.0 diff --git a/.constraints/py3.8.txt b/.constraints/py3.8.txt index 0641ea9..04f708d 100644 --- a/.constraints/py3.8.txt +++ b/.constraints/py3.8.txt @@ -2,23 +2,23 @@ # uv pip compile pyproject.toml -o .constraints/py3.8.txt --all-extras --no-annotate --python-version=3.8 --no-emit-package setuptools accessible-pygments==0.0.4 alabaster==0.7.13 -anyio==4.3.0 +anyio==4.4.0 argon2-cffi==23.1.0 argon2-cffi-bindings==21.2.0 arrow==1.3.0 asttokens==2.4.1 async-lru==2.0.4 attrs==23.2.0 -awkward==2.6.3 -awkward-cpp==32 -babel==2.14.0 +awkward==2.6.6 +awkward-cpp==35 +babel==2.15.0 backcall==0.2.0 beautifulsoup4==4.12.3 -black==24.3.0 +black==24.4.2 bleach==6.1.0 cachetools==5.3.3 cattrs==23.2.3 -certifi==2024.2.2 +certifi==2024.6.2 cffi==1.16.0 cfgv==3.4.0 chardet==5.2.0 @@ -27,140 +27,140 @@ click==8.1.7 colorama==0.4.6 comm==0.2.2 contourpy==1.1.1 -coverage==7.4.4 +coverage==7.5.4 cramjam==2.8.3 cycler==0.12.1 -debugpy==1.8.1 +debugpy==1.8.2 decorator==5.1.1 defusedxml==0.7.1 distlib==0.3.8 docstring-to-markdown==0.15 docutils==0.19 -exceptiongroup==1.2.0 -execnet==2.1.0 +exceptiongroup==1.2.1 +execnet==2.1.1 executing==2.0.1 -fastjsonschema==2.19.1 -filelock==3.13.3 -fonttools==4.51.0 +fastjsonschema==2.20.0 +filelock==3.15.4 +fonttools==4.53.0 fqdn==1.5.1 -fsspec==2024.3.1 +fsspec==2024.6.1 gitdb==4.0.11 gitpython==3.1.43 -gprof2dot==2022.7.29 +gprof2dot==2024.6.6 greenlet==3.0.3 h11==0.14.0 httpcore==1.0.5 httpx==0.27.0 -identify==2.5.35 -idna==3.6 +identify==2.5.36 +idna==3.7 imagesize==1.4.1 -importlib-metadata==7.1.0 +importlib-metadata==8.0.0 importlib-resources==6.4.0 iniconfig==2.0.0 -ipykernel==6.29.4 +ipykernel==6.29.5 ipython==8.12.3 -ipywidgets==8.1.2 +ipywidgets==8.1.3 isoduration==20.11.0 isort==5.13.2 jedi==0.19.1 -jinja2==3.1.3 -json5==0.9.24 -jsonpointer==2.4 -jsonschema==4.21.1 +jinja2==3.1.4 +json5==0.9.25 +jsonpointer==3.0.0 +jsonschema==4.22.0 jsonschema-specifications==2023.12.1 jupyter-cache==0.6.1 -jupyter-client==8.6.1 +jupyter-client==8.6.2 jupyter-core==5.7.2 jupyter-events==0.10.0 -jupyter-lsp==2.2.4 -jupyter-server==2.13.0 +jupyter-lsp==2.2.5 +jupyter-server==2.14.1 jupyter-server-mathjax==0.2.6 jupyter-server-terminals==0.5.3 -jupyterlab==4.1.5 +jupyterlab==4.2.3 jupyterlab-code-formatter==2.2.1 -jupyterlab-git==0.50.0 +jupyterlab-git==0.50.1 jupyterlab-lsp==5.1.0 -jupyterlab-myst==2.3.2 +jupyterlab-myst==2.4.2 jupyterlab-pygments==0.3.0 -jupyterlab-server==2.25.4 -jupyterlab-widgets==3.0.10 +jupyterlab-server==2.27.2 +jupyterlab-widgets==3.0.11 kiwisolver==1.4.5 -livereload==2.6.3 +livereload==2.7.0 lsprotocol==2023.0.1 markdown-it-py==2.2.0 markupsafe==2.1.5 matplotlib==3.7.5 -matplotlib-inline==0.1.6 +matplotlib-inline==0.1.7 mdit-py-plugins==0.3.5 mdurl==0.1.2 mistune==3.0.2 -mypy==1.9.0 +mypy==1.10.1 mypy-extensions==1.0.0 myst-nb==0.17.2 myst-parser==0.18.1 nbclient==0.6.8 -nbconvert==7.16.3 +nbconvert==7.16.4 nbdime==4.0.1 nbformat==5.10.4 -nbmake==1.5.3 +nbmake==1.5.4 nest-asyncio==1.6.0 -nodeenv==1.8.0 +nodeenv==1.9.1 notebook-shim==0.2.4 numpy==1.24.4 overrides==7.7.0 -packaging==24.0 +packaging==24.1 pandas==2.0.3 pandocfilters==1.5.1 parso==0.8.4 pathspec==0.12.1 pexpect==4.9.0 pickleshare==0.7.5 -pillow==10.3.0 +pillow==10.4.0 pkgutil-resolve-name==1.3.10 -platformdirs==4.2.0 -pluggy==1.4.0 +platformdirs==4.2.2 +pluggy==1.5.0 pre-commit==3.5.0 prometheus-client==0.20.0 -prompt-toolkit==3.0.43 -psutil==5.9.8 +prompt-toolkit==3.0.47 +psutil==6.0.0 ptyprocess==0.7.0 pure-eval==0.2.2 pycparser==2.22 pydata-sphinx-theme==0.14.4 -pygments==2.17.2 +pygments==2.18.0 pyparsing==3.1.2 -pyproject-api==1.6.1 -pytest==8.1.1 +pyproject-api==1.7.1 +pytest==8.2.2 pytest-cov==5.0.0 pytest-profiling==1.7.0 -pytest-xdist==3.5.0 +pytest-xdist==3.6.1 python-dateutil==2.9.0.post0 python-json-logger==2.0.7 python-lsp-jsonrpc==1.1.2 -python-lsp-ruff==2.2.0 +python-lsp-ruff==2.2.1 python-lsp-server==1.11.0 pytoolconfig==1.3.1 pytz==2024.1 pyyaml==6.0.1 -pyzmq==25.1.2 -referencing==0.34.0 -requests==2.31.0 +pyzmq==26.0.3 +referencing==0.35.1 +requests==2.32.3 rfc3339-validator==0.1.4 rfc3986-validator==0.1.1 rope==1.13.0 -rpds-py==0.18.0 -ruff==0.3.5 -send2trash==1.8.2 +rpds-py==0.18.1 +ruff==0.5.0 +send2trash==1.8.3 six==1.16.0 smmap==5.0.1 sniffio==1.3.1 snowballstemmer==2.2.0 soupsieve==2.5 sphinx==5.3.0 -sphinx-api-relink==0.0.8 +sphinx-api-relink==0.0.9 sphinx-autobuild==2021.3.14 sphinx-book-theme==1.0.1 -sphinx-codeautolink==0.15.0 +sphinx-codeautolink==0.15.2 sphinx-copybutton==0.5.2 sphinx-thebe==0.3.1 sphinx-togglebutton==0.3.2 @@ -170,30 +170,30 @@ sphinxcontrib-htmlhelp==2.0.1 sphinxcontrib-jsmath==1.0.1 sphinxcontrib-qthelp==1.0.3 sphinxcontrib-serializinghtml==1.1.5 -sqlalchemy==2.0.29 +sqlalchemy==2.0.31 stack-data==0.6.3 tabulate==0.9.0 terminado==0.18.1 -tinycss2==1.2.1 +tinycss2==1.3.0 tomli==2.0.1 -tornado==6.4 -tox==4.14.2 -traitlets==5.14.2 +tornado==6.4.1 +tox==4.15.1 +traitlets==5.14.3 types-python-dateutil==2.9.0.20240316 -typing-extensions==4.11.0 +typing-extensions==4.12.2 tzdata==2024.1 -ujson==5.9.0 -uproot==5.3.2 +ujson==5.10.0 +uproot==5.3.9 uri-template==1.3.0 -urllib3==2.2.1 -virtualenv==20.25.1 +urllib3==2.2.2 +virtualenv==20.26.3 wcwidth==0.2.13 -webcolors==1.13 +webcolors==24.6.0 webencodings==0.5.1 -websocket-client==1.7.0 +websocket-client==1.8.0 wheel==0.43.0 -widgetsnbextension==4.0.10 -zipp==3.18.1 +widgetsnbextension==4.0.11 +zipp==3.19.2 # The following packages were excluded from the output: # setuptools diff --git a/.constraints/py3.9.txt b/.constraints/py3.9.txt index 33eeef6..ceb2e2b 100644 --- a/.constraints/py3.9.txt +++ b/.constraints/py3.9.txt @@ -1,23 +1,23 @@ # This file was autogenerated by uv via the following command: # uv pip compile pyproject.toml -o .constraints/py3.9.txt --all-extras --no-annotate --python-version=3.9 --no-emit-package setuptools -accessible-pygments==0.0.4 +accessible-pygments==0.0.5 alabaster==0.7.16 -anyio==4.3.0 +anyio==4.4.0 argon2-cffi==23.1.0 argon2-cffi-bindings==21.2.0 arrow==1.3.0 asttokens==2.4.1 async-lru==2.0.4 attrs==23.2.0 -awkward==2.6.3 -awkward-cpp==32 -babel==2.14.0 +awkward==2.6.6 +awkward-cpp==35 +babel==2.15.0 beautifulsoup4==4.12.3 -black==24.3.0 +black==24.4.2 bleach==6.1.0 cachetools==5.3.3 cattrs==23.2.3 -certifi==2024.2.2 +certifi==2024.6.2 cffi==1.16.0 cfgv==3.4.0 chardet==5.2.0 @@ -26,138 +26,137 @@ click==8.1.7 colorama==0.4.6 comm==0.2.2 contourpy==1.2.1 -coverage==7.4.4 +coverage==7.5.4 cramjam==2.8.3 cycler==0.12.1 -debugpy==1.8.1 +debugpy==1.8.2 decorator==5.1.1 defusedxml==0.7.1 distlib==0.3.8 docstring-to-markdown==0.15 -docutils==0.20.1 -exceptiongroup==1.2.0 -execnet==2.1.0 +docutils==0.21.2 +exceptiongroup==1.2.1 +execnet==2.1.1 executing==2.0.1 -fastjsonschema==2.19.1 -filelock==3.13.3 -fonttools==4.51.0 +fastjsonschema==2.20.0 +filelock==3.15.4 +fonttools==4.53.0 fqdn==1.5.1 -fsspec==2024.3.1 +fsspec==2024.6.1 gitdb==4.0.11 gitpython==3.1.43 -gprof2dot==2022.7.29 +gprof2dot==2024.6.6 greenlet==3.0.3 h11==0.14.0 httpcore==1.0.5 httpx==0.27.0 -identify==2.5.35 -idna==3.6 +identify==2.5.36 +idna==3.7 imagesize==1.4.1 -importlib-metadata==7.1.0 +importlib-metadata==8.0.0 importlib-resources==6.4.0 iniconfig==2.0.0 -ipykernel==6.29.4 +ipykernel==6.29.5 ipython==8.18.1 -ipywidgets==8.1.2 +ipywidgets==8.1.3 isoduration==20.11.0 isort==5.13.2 jedi==0.19.1 -jinja2==3.1.3 -json5==0.9.24 -jsonpointer==2.4 -jsonschema==4.21.1 +jinja2==3.1.4 +json5==0.9.25 +jsonpointer==3.0.0 +jsonschema==4.22.0 jsonschema-specifications==2023.12.1 jupyter-cache==1.0.0 -jupyter-client==8.6.1 +jupyter-client==8.6.2 jupyter-core==5.7.2 jupyter-events==0.10.0 -jupyter-lsp==2.2.4 -jupyter-server==2.13.0 +jupyter-lsp==2.2.5 +jupyter-server==2.14.1 jupyter-server-mathjax==0.2.6 jupyter-server-terminals==0.5.3 -jupyterlab==4.1.5 +jupyterlab==4.2.3 jupyterlab-code-formatter==2.2.1 -jupyterlab-git==0.50.0 +jupyterlab-git==0.50.1 jupyterlab-lsp==5.1.0 -jupyterlab-myst==2.3.2 +jupyterlab-myst==2.4.2 jupyterlab-pygments==0.3.0 -jupyterlab-server==2.25.4 -jupyterlab-widgets==3.0.10 +jupyterlab-server==2.27.2 +jupyterlab-widgets==3.0.11 kiwisolver==1.4.5 -livereload==2.6.3 lsprotocol==2023.0.1 markdown-it-py==3.0.0 markupsafe==2.1.5 -matplotlib==3.8.4 -matplotlib-inline==0.1.6 -mdit-py-plugins==0.4.0 +matplotlib==3.9.0 +matplotlib-inline==0.1.7 +mdit-py-plugins==0.4.1 mdurl==0.1.2 mistune==3.0.2 -mypy==1.9.0 +mypy==1.10.1 mypy-extensions==1.0.0 -myst-nb==1.0.0 -myst-parser==2.0.0 +myst-nb==1.1.1 +myst-parser==3.0.1 nbclient==0.6.8 -nbconvert==7.16.3 +nbconvert==7.16.4 nbdime==4.0.1 nbformat==5.10.4 -nbmake==1.5.3 +nbmake==1.5.4 nest-asyncio==1.6.0 -nodeenv==1.8.0 +nodeenv==1.9.1 notebook-shim==0.2.4 -numpy==1.26.4 +numpy==2.0.0 overrides==7.7.0 -packaging==24.0 -pandas==2.2.1 +packaging==24.1 +pandas==2.2.2 pandocfilters==1.5.1 parso==0.8.4 pathspec==0.12.1 pexpect==4.9.0 -pillow==10.3.0 -platformdirs==4.2.0 -pluggy==1.4.0 -pre-commit==3.7.0 +pillow==10.4.0 +platformdirs==4.2.2 +pluggy==1.5.0 +pre-commit==3.7.1 prometheus-client==0.20.0 -prompt-toolkit==3.0.43 -psutil==5.9.8 +prompt-toolkit==3.0.47 +psutil==6.0.0 ptyprocess==0.7.0 pure-eval==0.2.2 pycparser==2.22 -pydata-sphinx-theme==0.15.2 -pygments==2.17.2 +pydata-sphinx-theme==0.15.4 +pygments==2.18.0 pyparsing==3.1.2 -pyproject-api==1.6.1 -pytest==8.1.1 +pyproject-api==1.7.1 +pytest==8.2.2 pytest-cov==5.0.0 pytest-profiling==1.7.0 -pytest-xdist==3.5.0 +pytest-xdist==3.6.1 python-dateutil==2.9.0.post0 python-json-logger==2.0.7 python-lsp-jsonrpc==1.1.2 -python-lsp-ruff==2.2.0 +python-lsp-ruff==2.2.1 python-lsp-server==1.11.0 pytoolconfig==1.3.1 pytz==2024.1 pyyaml==6.0.1 -pyzmq==25.1.2 -referencing==0.34.0 -requests==2.31.0 +pyzmq==26.0.3 +referencing==0.35.1 +requests==2.32.3 rfc3339-validator==0.1.4 rfc3986-validator==0.1.1 rope==1.13.0 -rpds-py==0.18.0 -ruff==0.3.5 -send2trash==1.8.2 +rpds-py==0.18.1 +ruff==0.5.0 +send2trash==1.8.3 six==1.16.0 smmap==5.0.1 sniffio==1.3.1 snowballstemmer==2.2.0 soupsieve==2.5 -sphinx==7.2.6 -sphinx-api-relink==0.0.8 -sphinx-autobuild==2024.2.4 -sphinx-book-theme==1.1.2 -sphinx-codeautolink==0.15.0 +sphinx==7.3.7 +sphinx-api-relink==0.0.9 +sphinx-autobuild==2024.4.16 +sphinx-book-theme==1.1.3 +sphinx-codeautolink==0.15.2 sphinx-copybutton==0.5.2 sphinx-thebe==0.3.1 sphinx-togglebutton==0.3.2 @@ -167,30 +166,34 @@ sphinxcontrib-htmlhelp==2.0.5 sphinxcontrib-jsmath==1.0.1 sphinxcontrib-qthelp==1.0.7 sphinxcontrib-serializinghtml==1.1.10 -sqlalchemy==2.0.29 +sqlalchemy==2.0.31 stack-data==0.6.3 +starlette==0.37.2 tabulate==0.9.0 terminado==0.18.1 -tinycss2==1.2.1 +tinycss2==1.3.0 tomli==2.0.1 -tornado==6.4 -tox==4.14.2 -traitlets==5.14.2 +tornado==6.4.1 +tox==4.15.1 +traitlets==5.14.3 types-python-dateutil==2.9.0.20240316 -typing-extensions==4.11.0 +typing-extensions==4.12.2 tzdata==2024.1 -ujson==5.9.0 -uproot==5.3.2 +ujson==5.10.0 +uproot==5.3.9 uri-template==1.3.0 -urllib3==2.2.1 -virtualenv==20.25.1 +urllib3==2.2.2 +uvicorn==0.30.1 +virtualenv==20.26.3 +watchfiles==0.22.0 wcwidth==0.2.13 -webcolors==1.13 +webcolors==24.6.0 webencodings==0.5.1 -websocket-client==1.7.0 +websocket-client==1.8.0 +websockets==12.0 wheel==0.43.0 -widgetsnbextension==4.0.10 -zipp==3.18.1 +widgetsnbextension==4.0.11 +zipp==3.19.2 # The following packages were excluded from the output: # setuptools From 88f43a37fe626560d9095cf6334d2edef312adad Mon Sep 17 00:00:00 2001 From: Remco de Boer <29308176+redeboer@users.noreply.github.com> Date: Sun, 27 Oct 2024 22:05:53 +0100 Subject: [PATCH 3/5] DX: define developer environment with `uv` --- .binder/postBuild | 12 + .binder/runtime.txt | 1 + .constraints/.gitignore | 1 - .constraints/py3.10.txt | 198 - .constraints/py3.11.txt | 196 - .constraints/py3.12.txt | 196 - .constraints/py3.6.txt | 165 - .constraints/py3.7.txt | 196 - .constraints/py3.8.txt | 199 - .constraints/py3.9.txt | 199 - .cspell.json | 12 +- .editorconfig | 5 +- .envrc | 2 + .github/workflows/cd.yml | 10 +- .github/workflows/ci.yml | 6 +- .github/workflows/clean-caches.yml | 4 +- .../workflows/{requirements.yml => lock.yml} | 10 +- .github/workflows/pr-linting.yml | 2 +- .github/workflows/release-drafter.yml | 2 +- .gitignore | 2 - .gitpod.yml | 38 - .pre-commit-config.yaml | 56 +- .python-version | 1 + .vscode/extensions.json | 2 +- .vscode/settings.json | 6 +- CONTRIBUTING.md | 44 +- README.md | 9 +- docs/_templates/genindex.html | 55 - docs/_templates/layout.html | 4 - docs/_templates/module.rst_t | 8 - docs/_templates/package.rst_t | 44 - docs/_templates/toc.rst_t | 7 - docs/conf.py | 4 +- docs/index.md | 2 +- docs/install.md | 12 +- environment.yml | 11 - pyproject.toml | 229 +- src/boostcfg/__init__.py | 2 +- src/boostcfg/py.typed | 0 src/pawian/data.py | 8 +- src/pawian/py.typed | 0 src/pawian/qa.py | 5 +- tests/boostcfg/test_boostcfg.py | 2 +- tests/pawian/data/test_read_ascii.py | 18 +- tests/pawian/test_qa.py | 4 +- tox.ini | 126 - uv.lock | 3773 +++++++++++++++++ 47 files changed, 4082 insertions(+), 1806 deletions(-) create mode 100755 .binder/postBuild create mode 100644 .binder/runtime.txt delete mode 100644 .constraints/.gitignore delete mode 100644 .constraints/py3.10.txt delete mode 100644 .constraints/py3.11.txt delete mode 100644 .constraints/py3.12.txt delete mode 100644 .constraints/py3.6.txt delete mode 100644 .constraints/py3.7.txt delete mode 100644 .constraints/py3.8.txt delete mode 100644 .constraints/py3.9.txt create mode 100644 .envrc rename .github/workflows/{requirements.yml => lock.yml} (68%) delete mode 100644 .gitpod.yml create mode 100644 .python-version delete mode 100644 docs/_templates/genindex.html delete mode 100644 docs/_templates/layout.html delete mode 100644 docs/_templates/module.rst_t delete mode 100644 docs/_templates/package.rst_t delete mode 100644 docs/_templates/toc.rst_t delete mode 100644 environment.yml create mode 100644 src/boostcfg/py.typed create mode 100644 src/pawian/py.typed delete mode 100644 tox.ini create mode 100644 uv.lock diff --git a/.binder/postBuild b/.binder/postBuild new file mode 100755 index 0000000..0a5a2b2 --- /dev/null +++ b/.binder/postBuild @@ -0,0 +1,12 @@ +#!/bin/bash +set -ex +curl -LsSf https://astral.sh/uv/install.sh | sh +source $HOME/.cargo/env +uv export \ + --group jupyter \ + > requirements.txt +uv pip install \ + --requirement requirements.txt \ + --system +rm requirements.txt +uv cache clean diff --git a/.binder/runtime.txt b/.binder/runtime.txt new file mode 100644 index 0000000..d2aca3a --- /dev/null +++ b/.binder/runtime.txt @@ -0,0 +1 @@ +python-3.12 diff --git a/.constraints/.gitignore b/.constraints/.gitignore deleted file mode 100644 index 36a07ad..0000000 --- a/.constraints/.gitignore +++ /dev/null @@ -1 +0,0 @@ -!py3.*.txt diff --git a/.constraints/py3.10.txt b/.constraints/py3.10.txt deleted file mode 100644 index ccf46e7..0000000 --- a/.constraints/py3.10.txt +++ /dev/null @@ -1,198 +0,0 @@ -# This file was autogenerated by uv via the following command: -# uv pip compile pyproject.toml -o .constraints/py3.10.txt --all-extras --no-annotate --python-version=3.10 --no-emit-package setuptools -accessible-pygments==0.0.5 -alabaster==0.7.16 -anyio==4.4.0 -argon2-cffi==23.1.0 -argon2-cffi-bindings==21.2.0 -arrow==1.3.0 -asttokens==2.4.1 -async-lru==2.0.4 -attrs==23.2.0 -awkward==2.6.6 -awkward-cpp==35 -babel==2.15.0 -beautifulsoup4==4.12.3 -black==24.4.2 -bleach==6.1.0 -cachetools==5.3.3 -cattrs==23.2.3 -certifi==2024.6.2 -cffi==1.16.0 -cfgv==3.4.0 -chardet==5.2.0 -charset-normalizer==3.3.2 -click==8.1.7 -colorama==0.4.6 -comm==0.2.2 -contourpy==1.2.1 -coverage==7.5.4 -cramjam==2.8.3 -cycler==0.12.1 -debugpy==1.8.2 -decorator==5.1.1 -defusedxml==0.7.1 -distlib==0.3.8 -docstring-to-markdown==0.15 -docutils==0.21.2 -exceptiongroup==1.2.1 -execnet==2.1.1 -executing==2.0.1 -fastjsonschema==2.20.0 -filelock==3.15.4 -fonttools==4.53.0 -fqdn==1.5.1 -fsspec==2024.6.1 -gitdb==4.0.11 -gitpython==3.1.43 -gprof2dot==2024.6.6 -greenlet==3.0.3 -h11==0.14.0 -httpcore==1.0.5 -httpx==0.27.0 -identify==2.5.36 -idna==3.7 -imagesize==1.4.1 -importlib-metadata==8.0.0 -iniconfig==2.0.0 -ipykernel==6.29.5 -ipython==8.26.0 -ipywidgets==8.1.3 -isoduration==20.11.0 -isort==5.13.2 -jedi==0.19.1 -jinja2==3.1.4 -json5==0.9.25 -jsonpointer==3.0.0 -jsonschema==4.22.0 -jsonschema-specifications==2023.12.1 -jupyter-cache==1.0.0 -jupyter-client==8.6.2 -jupyter-core==5.7.2 -jupyter-events==0.10.0 -jupyter-lsp==2.2.5 -jupyter-server==2.14.1 -jupyter-server-mathjax==0.2.6 -jupyter-server-terminals==0.5.3 -jupyterlab==4.2.3 -jupyterlab-code-formatter==2.2.1 -jupyterlab-git==0.50.1 -jupyterlab-lsp==5.1.0 -jupyterlab-myst==2.4.2 -jupyterlab-pygments==0.3.0 -jupyterlab-server==2.27.2 -jupyterlab-widgets==3.0.11 -kiwisolver==1.4.5 -lsprotocol==2023.0.1 -markdown-it-py==3.0.0 -markupsafe==2.1.5 -matplotlib==3.9.0 -matplotlib-inline==0.1.7 -mdit-py-plugins==0.4.1 -mdurl==0.1.2 -mistune==3.0.2 -mypy==1.10.1 -mypy-extensions==1.0.0 -myst-nb==1.1.1 -myst-parser==3.0.1 -nbclient==0.6.8 -nbconvert==7.16.4 -nbdime==4.0.1 -nbformat==5.10.4 -nbmake==1.5.4 -nest-asyncio==1.6.0 -nodeenv==1.9.1 -notebook-shim==0.2.4 -numpy==2.0.0 -overrides==7.7.0 -packaging==24.1 -pandas==2.2.2 -pandocfilters==1.5.1 -parso==0.8.4 -pathspec==0.12.1 -pexpect==4.9.0 -pillow==10.4.0 -platformdirs==4.2.2 -pluggy==1.5.0 -pre-commit==3.7.1 -prometheus-client==0.20.0 -prompt-toolkit==3.0.47 -psutil==6.0.0 -ptyprocess==0.7.0 -pure-eval==0.2.2 -pycparser==2.22 -pydata-sphinx-theme==0.15.4 -pygments==2.18.0 -pyparsing==3.1.2 -pyproject-api==1.7.1 -pytest==8.2.2 -pytest-cov==5.0.0 -pytest-profiling==1.7.0 -pytest-xdist==3.6.1 -python-dateutil==2.9.0.post0 -python-json-logger==2.0.7 -python-lsp-jsonrpc==1.1.2 -python-lsp-ruff==2.2.1 -python-lsp-server==1.11.0 -pytoolconfig==1.3.1 -pytz==2024.1 -pyyaml==6.0.1 -pyzmq==26.0.3 -referencing==0.35.1 -requests==2.32.3 -rfc3339-validator==0.1.4 -rfc3986-validator==0.1.1 -rope==1.13.0 -rpds-py==0.18.1 -ruff==0.5.0 -send2trash==1.8.3 -six==1.16.0 -smmap==5.0.1 -sniffio==1.3.1 -snowballstemmer==2.2.0 -soupsieve==2.5 -sphinx==7.3.7 -sphinx-api-relink==0.0.9 -sphinx-autobuild==2024.4.16 -sphinx-book-theme==1.1.3 -sphinx-codeautolink==0.15.2 -sphinx-copybutton==0.5.2 -sphinx-thebe==0.3.1 -sphinx-togglebutton==0.3.2 -sphinxcontrib-applehelp==1.0.8 -sphinxcontrib-devhelp==1.0.6 -sphinxcontrib-htmlhelp==2.0.5 -sphinxcontrib-jsmath==1.0.1 -sphinxcontrib-qthelp==1.0.7 -sphinxcontrib-serializinghtml==1.1.10 -sqlalchemy==2.0.31 -stack-data==0.6.3 -starlette==0.37.2 -tabulate==0.9.0 -terminado==0.18.1 -tinycss2==1.3.0 -tomli==2.0.1 -tornado==6.4.1 -tox==4.15.1 -traitlets==5.14.3 -types-python-dateutil==2.9.0.20240316 -typing-extensions==4.12.2 -tzdata==2024.1 -ujson==5.10.0 -uproot==5.3.9 -uri-template==1.3.0 -urllib3==2.2.2 -uvicorn==0.30.1 -virtualenv==20.26.3 -watchfiles==0.22.0 -wcwidth==0.2.13 -webcolors==24.6.0 -webencodings==0.5.1 -websocket-client==1.8.0 -websockets==12.0 -wheel==0.43.0 -widgetsnbextension==4.0.11 -zipp==3.19.2 - -# The following packages were excluded from the output: -# setuptools diff --git a/.constraints/py3.11.txt b/.constraints/py3.11.txt deleted file mode 100644 index 33ced71..0000000 --- a/.constraints/py3.11.txt +++ /dev/null @@ -1,196 +0,0 @@ -# This file was autogenerated by uv via the following command: -# uv pip compile pyproject.toml -o .constraints/py3.11.txt --all-extras --no-annotate --python-version=3.11 --no-emit-package setuptools -accessible-pygments==0.0.5 -alabaster==0.7.16 -anyio==4.4.0 -argon2-cffi==23.1.0 -argon2-cffi-bindings==21.2.0 -arrow==1.3.0 -asttokens==2.4.1 -async-lru==2.0.4 -attrs==23.2.0 -awkward==2.6.6 -awkward-cpp==35 -babel==2.15.0 -beautifulsoup4==4.12.3 -black==24.4.2 -bleach==6.1.0 -cachetools==5.3.3 -cattrs==23.2.3 -certifi==2024.6.2 -cffi==1.16.0 -cfgv==3.4.0 -chardet==5.2.0 -charset-normalizer==3.3.2 -click==8.1.7 -colorama==0.4.6 -comm==0.2.2 -contourpy==1.2.1 -coverage==7.5.4 -cramjam==2.8.3 -cycler==0.12.1 -debugpy==1.8.2 -decorator==5.1.1 -defusedxml==0.7.1 -distlib==0.3.8 -docstring-to-markdown==0.15 -docutils==0.21.2 -execnet==2.1.1 -executing==2.0.1 -fastjsonschema==2.20.0 -filelock==3.15.4 -fonttools==4.53.0 -fqdn==1.5.1 -fsspec==2024.6.1 -gitdb==4.0.11 -gitpython==3.1.43 -gprof2dot==2024.6.6 -greenlet==3.0.3 -h11==0.14.0 -httpcore==1.0.5 -httpx==0.27.0 -identify==2.5.36 -idna==3.7 -imagesize==1.4.1 -importlib-metadata==8.0.0 -iniconfig==2.0.0 -ipykernel==6.29.5 -ipython==8.26.0 -ipywidgets==8.1.3 -isoduration==20.11.0 -isort==5.13.2 -jedi==0.19.1 -jinja2==3.1.4 -json5==0.9.25 -jsonpointer==3.0.0 -jsonschema==4.22.0 -jsonschema-specifications==2023.12.1 -jupyter-cache==1.0.0 -jupyter-client==8.6.2 -jupyter-core==5.7.2 -jupyter-events==0.10.0 -jupyter-lsp==2.2.5 -jupyter-server==2.14.1 -jupyter-server-mathjax==0.2.6 -jupyter-server-terminals==0.5.3 -jupyterlab==4.2.3 -jupyterlab-code-formatter==2.2.1 -jupyterlab-git==0.50.1 -jupyterlab-lsp==5.1.0 -jupyterlab-myst==2.4.2 -jupyterlab-pygments==0.3.0 -jupyterlab-server==2.27.2 -jupyterlab-widgets==3.0.11 -kiwisolver==1.4.5 -lsprotocol==2023.0.1 -markdown-it-py==3.0.0 -markupsafe==2.1.5 -matplotlib==3.9.0 -matplotlib-inline==0.1.7 -mdit-py-plugins==0.4.1 -mdurl==0.1.2 -mistune==3.0.2 -mypy==1.10.1 -mypy-extensions==1.0.0 -myst-nb==1.1.1 -myst-parser==3.0.1 -nbclient==0.6.8 -nbconvert==7.16.4 -nbdime==4.0.1 -nbformat==5.10.4 -nbmake==1.5.4 -nest-asyncio==1.6.0 -nodeenv==1.9.1 -notebook-shim==0.2.4 -numpy==2.0.0 -overrides==7.7.0 -packaging==24.1 -pandas==2.2.2 -pandocfilters==1.5.1 -parso==0.8.4 -pathspec==0.12.1 -pexpect==4.9.0 -pillow==10.4.0 -platformdirs==4.2.2 -pluggy==1.5.0 -pre-commit==3.7.1 -prometheus-client==0.20.0 -prompt-toolkit==3.0.47 -psutil==6.0.0 -ptyprocess==0.7.0 -pure-eval==0.2.2 -pycparser==2.22 -pydata-sphinx-theme==0.15.4 -pygments==2.18.0 -pyparsing==3.1.2 -pyproject-api==1.7.1 -pytest==8.2.2 -pytest-cov==5.0.0 -pytest-profiling==1.7.0 -pytest-xdist==3.6.1 -python-dateutil==2.9.0.post0 -python-json-logger==2.0.7 -python-lsp-jsonrpc==1.1.2 -python-lsp-ruff==2.2.1 -python-lsp-server==1.11.0 -pytoolconfig==1.3.1 -pytz==2024.1 -pyyaml==6.0.1 -pyzmq==26.0.3 -referencing==0.35.1 -requests==2.32.3 -rfc3339-validator==0.1.4 -rfc3986-validator==0.1.1 -rope==1.13.0 -rpds-py==0.18.1 -ruff==0.5.0 -send2trash==1.8.3 -six==1.16.0 -smmap==5.0.1 -sniffio==1.3.1 -snowballstemmer==2.2.0 -soupsieve==2.5 -sphinx==7.3.7 -sphinx-api-relink==0.0.9 -sphinx-autobuild==2024.4.16 -sphinx-book-theme==1.1.3 -sphinx-codeautolink==0.15.2 -sphinx-copybutton==0.5.2 -sphinx-thebe==0.3.1 -sphinx-togglebutton==0.3.2 -sphinxcontrib-applehelp==1.0.8 -sphinxcontrib-devhelp==1.0.6 -sphinxcontrib-htmlhelp==2.0.5 -sphinxcontrib-jsmath==1.0.1 -sphinxcontrib-qthelp==1.0.7 -sphinxcontrib-serializinghtml==1.1.10 -sqlalchemy==2.0.31 -stack-data==0.6.3 -starlette==0.37.2 -tabulate==0.9.0 -terminado==0.18.1 -tinycss2==1.3.0 -tornado==6.4.1 -tox==4.15.1 -traitlets==5.14.3 -types-python-dateutil==2.9.0.20240316 -typing-extensions==4.12.2 -tzdata==2024.1 -ujson==5.10.0 -uproot==5.3.9 -uri-template==1.3.0 -urllib3==2.2.2 -uvicorn==0.30.1 -virtualenv==20.26.3 -watchfiles==0.22.0 -wcwidth==0.2.13 -webcolors==24.6.0 -webencodings==0.5.1 -websocket-client==1.8.0 -websockets==12.0 -wheel==0.43.0 -widgetsnbextension==4.0.11 -zipp==3.19.2 - -# The following packages were excluded from the output: -# setuptools diff --git a/.constraints/py3.12.txt b/.constraints/py3.12.txt deleted file mode 100644 index 6a93e2d..0000000 --- a/.constraints/py3.12.txt +++ /dev/null @@ -1,196 +0,0 @@ -# This file was autogenerated by uv via the following command: -# uv pip compile pyproject.toml -o .constraints/py3.12.txt --all-extras --no-annotate --python-version=3.12 --no-emit-package setuptools -accessible-pygments==0.0.5 -alabaster==0.7.16 -anyio==4.4.0 -argon2-cffi==23.1.0 -argon2-cffi-bindings==21.2.0 -arrow==1.3.0 -asttokens==2.4.1 -async-lru==2.0.4 -attrs==23.2.0 -awkward==2.6.6 -awkward-cpp==35 -babel==2.15.0 -beautifulsoup4==4.12.3 -black==24.4.2 -bleach==6.1.0 -cachetools==5.3.3 -cattrs==23.2.3 -certifi==2024.6.2 -cffi==1.16.0 -cfgv==3.4.0 -chardet==5.2.0 -charset-normalizer==3.3.2 -click==8.1.7 -colorama==0.4.6 -comm==0.2.2 -contourpy==1.2.1 -coverage==7.5.4 -cramjam==2.8.3 -cycler==0.12.1 -debugpy==1.8.2 -decorator==5.1.1 -defusedxml==0.7.1 -distlib==0.3.8 -docstring-to-markdown==0.15 -docutils==0.21.2 -execnet==2.1.1 -executing==2.0.1 -fastjsonschema==2.20.0 -filelock==3.15.4 -fonttools==4.53.0 -fqdn==1.5.1 -fsspec==2024.6.1 -gitdb==4.0.11 -gitpython==3.1.43 -gprof2dot==2024.6.6 -greenlet==3.0.3 -h11==0.14.0 -httpcore==1.0.5 -httpx==0.27.0 -identify==2.5.36 -idna==3.7 -imagesize==1.4.1 -importlib-metadata==8.0.0 -iniconfig==2.0.0 -ipykernel==6.29.5 -ipython==8.26.0 -ipywidgets==8.1.3 -isoduration==20.11.0 -isort==5.13.2 -jedi==0.19.1 -jinja2==3.1.4 -json5==0.9.25 -jsonpointer==3.0.0 -jsonschema==4.22.0 -jsonschema-specifications==2023.12.1 -jupyter-cache==1.0.0 -jupyter-client==8.6.2 -jupyter-core==5.7.2 -jupyter-events==0.10.0 -jupyter-lsp==2.2.5 -jupyter-server==2.14.1 -jupyter-server-mathjax==0.2.6 -jupyter-server-terminals==0.5.3 -jupyterlab==4.2.3 -jupyterlab-code-formatter==2.2.1 -jupyterlab-git==0.50.1 -jupyterlab-lsp==5.1.0 -jupyterlab-myst==2.4.2 -jupyterlab-pygments==0.3.0 -jupyterlab-server==2.27.2 -jupyterlab-widgets==3.0.11 -kiwisolver==1.4.5 -lsprotocol==2023.0.1 -markdown-it-py==3.0.0 -markupsafe==2.1.5 -matplotlib==3.9.0 -matplotlib-inline==0.1.7 -mdit-py-plugins==0.4.1 -mdurl==0.1.2 -mistune==3.0.2 -mypy==1.10.1 -mypy-extensions==1.0.0 -myst-nb==1.1.1 -myst-parser==3.0.1 -nbclient==0.6.8 -nbconvert==7.16.4 -nbdime==4.0.1 -nbformat==5.10.4 -nbmake==1.5.4 -nest-asyncio==1.6.0 -nodeenv==1.9.1 -notebook-shim==0.2.4 -numpy==2.0.0 -overrides==7.7.0 -packaging==24.1 -pandas==2.2.2 -pandocfilters==1.5.1 -parso==0.8.4 -pathspec==0.12.1 -pexpect==4.9.0 -pillow==10.4.0 -platformdirs==4.2.2 -pluggy==1.5.0 -pre-commit==3.7.1 -prometheus-client==0.20.0 -prompt-toolkit==3.0.47 -psutil==6.0.0 -ptyprocess==0.7.0 -pure-eval==0.2.2 -pycparser==2.22 -pydata-sphinx-theme==0.15.4 -pygments==2.18.0 -pyparsing==3.1.2 -pyproject-api==1.7.1 -pytest==8.2.2 -pytest-cov==5.0.0 -pytest-profiling==1.7.0 -pytest-xdist==3.6.1 -python-dateutil==2.9.0.post0 -python-json-logger==2.0.7 -python-lsp-jsonrpc==1.1.2 -python-lsp-ruff==2.2.1 -python-lsp-server==1.11.0 -pytoolconfig==1.3.1 -pytz==2024.1 -pyyaml==6.0.1 -pyzmq==26.0.3 -referencing==0.35.1 -requests==2.32.3 -rfc3339-validator==0.1.4 -rfc3986-validator==0.1.1 -rope==1.13.0 -rpds-py==0.18.1 -ruff==0.5.0 -send2trash==1.8.3 -six==1.16.0 -smmap==5.0.1 -sniffio==1.3.1 -snowballstemmer==2.2.0 -soupsieve==2.5 -sphinx==7.3.7 -sphinx-api-relink==0.0.9 -sphinx-autobuild==2024.4.16 -sphinx-book-theme==1.1.3 -sphinx-codeautolink==0.15.2 -sphinx-copybutton==0.5.2 -sphinx-thebe==0.3.1 -sphinx-togglebutton==0.3.2 -sphinxcontrib-applehelp==1.0.8 -sphinxcontrib-devhelp==1.0.6 -sphinxcontrib-htmlhelp==2.0.5 -sphinxcontrib-jsmath==1.0.1 -sphinxcontrib-qthelp==1.0.7 -sphinxcontrib-serializinghtml==1.1.10 -sqlalchemy==2.0.31 -stack-data==0.6.3 -starlette==0.37.2 -tabulate==0.9.0 -terminado==0.18.1 -tinycss2==1.3.0 -tornado==6.4.1 -tox==4.15.1 -traitlets==5.14.3 -types-python-dateutil==2.9.0.20240316 -typing-extensions==4.12.2 -tzdata==2024.1 -ujson==5.10.0 -uproot==5.3.9 -uri-template==1.3.0 -urllib3==2.2.2 -uvicorn==0.30.1 -virtualenv==20.26.3 -watchfiles==0.22.0 -wcwidth==0.2.13 -webcolors==24.6.0 -webencodings==0.5.1 -websocket-client==1.8.0 -websockets==12.0 -wheel==0.43.0 -widgetsnbextension==4.0.11 -zipp==3.19.2 - -# The following packages were excluded from the output: -# setuptools diff --git a/.constraints/py3.6.txt b/.constraints/py3.6.txt deleted file mode 100644 index 486e4dc..0000000 --- a/.constraints/py3.6.txt +++ /dev/null @@ -1,165 +0,0 @@ -# -# This file is autogenerated by pip-compile with python 3.6 -# To update, run: -# -# pip-compile --extra=dev --no-annotate --output-file=.constraints/py3.6.txt --strip-extras -# -alabaster==0.7.13 -anyio==3.6.2 -argon2-cffi==21.3.0 -argon2-cffi-bindings==21.2.0 -async-generator==1.10 -attrs==21.4.0 -awkward==1.9.0 -babel==2.11.0 -backcall==0.2.0 -beautifulsoup4==4.12.2 -black==22.8.0 -bleach==4.1.0 -certifi==2023.11.17 -cffi==1.15.1 -cfgv==3.3.1 -charset-normalizer==2.0.12 -click==8.0.4 -colorama==0.4.5 -comm==0.1.4 -contextvars==2.4 -coverage==6.2 -cycler==0.11.0 -dataclasses==0.8 -decorator==5.1.1 -defusedxml==0.7.1 -distlib==0.3.7 -docutils==0.16 -entrypoints==0.4 -execnet==1.9.0 -filelock==3.4.1 -gitdb==4.0.9 -gitpython==3.1.18 -gprof2dot==2022.7.29 -greenlet==2.0.2 -identify==2.4.4 -idna==3.6 -imagesize==1.4.1 -immutables==0.19 -importlib-metadata==4.8.3 ; python_version < "3.8.0" -importlib-resources==3.3.1 -iniconfig==1.1.1 -ipykernel==5.5.6 -ipython==7.16.3 -ipython-genutils==0.2.0 -ipywidgets==7.8.1 -jedi==0.17.2 -jinja2==3.0.3 -json5==0.9.14 -jsonschema==3.2.0 -jupyter-cache==0.4.3 -jupyter-client==7.1.2 -jupyter-core==4.9.2 -jupyter-lsp==1.5.1 -jupyter-server==1.13.1 -jupyter-server-mathjax==0.2.3 -jupyter-sphinx==0.3.2 -jupyterlab==3.2.9 -jupyterlab-code-formatter==1.6.1 -jupyterlab-lsp==3.9.2 -jupyterlab-pygments==0.1.2 -jupyterlab-server==2.10.3 -jupyterlab-widgets==1.1.7 -kiwisolver==1.3.1 -livereload==2.6.3 -markdown-it-py==1.1.0 -markupsafe==2.0.1 -matplotlib==3.3.4 -mdit-py-plugins==0.2.8 -mistune==0.8.4 -mypy==0.971 -mypy-extensions==1.0.0 -myst-nb==0.13.2 -myst-parser==0.15.2 -nbclassic==0.3.5 -nbclient==0.5.9 -nbconvert==6.0.7 -nbdime==4.0.1 -nbformat==5.1.3 -nest-asyncio==1.5.8 -nodeenv==1.6.0 -notebook==6.4.10 -numpy==1.19.5 -packaging==21.3 -pandas==1.1.5 -pandocfilters==1.5.0 -parso==0.7.1 -pathspec==0.9.0 -pexpect==4.9.0 -pickleshare==0.7.5 -pillow==8.4.0 -platformdirs==2.4.0 -pluggy==1.0.0 -pre-commit==2.17.0 -prometheus-client==0.17.1 -prompt-toolkit==3.0.36 -ptyprocess==0.7.0 -py==1.11.0 -pycparser==2.21 -pydata-sphinx-theme==0.7.2 -pydeps==1.12.17 -pygments==2.14.0 -pyparsing==3.1.1 -pyrsistent==0.18.0 -pytest==7.0.1 -pytest-cov==4.0.0 -pytest-profiling==1.7.0 -pytest-xdist==3.0.2 -python-dateutil==2.8.2 -python-lsp-jsonrpc==1.0.0 -python-lsp-server==1.3.3 -pytz==2023.3.post1 -pyyaml==6.0.1 -pyzmq==25.1.2 -requests==2.27.1 -rope==1.1.1 -send2trash==1.8.2 -six==1.16.0 -smmap==5.0.0 -sniffio==1.2.0 -snowballstemmer==2.2.0 -soupsieve==2.3.2.post1 -sphinx==4.3.2 ; python_version < "3.8.0" -sphinx-autobuild==2021.3.14 -sphinx-book-theme==0.2.0 -sphinx-codeautolink==0.12.1 -sphinx-copybutton==0.5.0 -sphinx-thebe==0.2.1 -sphinx-togglebutton==0.3.2 -sphinxcontrib-applehelp==1.0.2 -sphinxcontrib-devhelp==1.0.2 -sphinxcontrib-htmlhelp==2.0.0 -sphinxcontrib-jsmath==1.0.1 -sphinxcontrib-qthelp==1.0.3 -sphinxcontrib-serializinghtml==1.1.5 -sqlalchemy==1.4.50 -stdlib-list==0.8.0 -terminado==0.12.1 -testpath==0.6.0 -toml==0.10.2 -tomli==1.2.3 -tornado==6.1 -tox==3.28.0 ; python_version < "3.8.0" -traitlets==4.3.3 -typed-ast==1.5.5 -types-setuptools==68.2.0.0 -typing-extensions==4.1.1 -ujson==4.3.0 -uproot==4.3.7 -urllib3==1.26.18 -virtualenv==20.15.1 ; python_version < "3.8.0" -wcwidth==0.2.12 -webencodings==0.5.1 -websocket-client==1.3.1 -wheel==0.37.1 -widgetsnbextension==3.6.6 -zipp==3.6.0 - -# The following packages are considered to be unsafe in a requirements file: -# setuptools diff --git a/.constraints/py3.7.txt b/.constraints/py3.7.txt deleted file mode 100644 index b36b201..0000000 --- a/.constraints/py3.7.txt +++ /dev/null @@ -1,196 +0,0 @@ -# This file was autogenerated by uv via the following command: -# uv pip compile pyproject.toml -o .constraints/py3.7.txt --all-extras --no-annotate --python-version=3.7 --no-emit-package setuptools -accessible-pygments==0.0.4 -aiofiles==22.1.0 -aiosqlite==0.19.0 -alabaster==0.7.13 -anyio==3.7.1 -argon2-cffi==23.1.0 -argon2-cffi-bindings==21.2.0 -arrow==1.2.3 -attrs==23.2.0 -awkward==2.2.4 -awkward-cpp==17 -babel==2.14.0 -backcall==0.2.0 -beautifulsoup4==4.12.3 -black==23.3.0 -bleach==6.0.0 -cached-property==1.5.2 -cachetools==5.3.3 -cattrs==23.1.2 -certifi==2024.6.2 -cffi==1.15.1 -cfgv==3.3.1 -chardet==5.2.0 -charset-normalizer==3.3.2 -click==8.1.7 -colorama==0.4.6 -comm==0.1.4 -coverage==7.2.7 -cycler==0.11.0 -debugpy==1.7.0 -decorator==5.1.1 -defusedxml==0.7.1 -distlib==0.3.8 -docstring-to-markdown==0.15 -docutils==0.19 -entrypoints==0.4 -exceptiongroup==1.2.1 -execnet==2.0.2 -fastjsonschema==2.20.0 -filelock==3.12.2 -fonttools==4.38.0 -fqdn==1.5.1 -gitdb==4.0.11 -gitpython==3.1.43 -gprof2dot==2022.7.29 -greenlet==3.0.3 -identify==2.5.24 -idna==3.7 -imagesize==1.4.1 -importlib-metadata==6.7.0 -importlib-resources==5.12.0 -iniconfig==2.0.0 -ipykernel==6.16.2 -ipython==7.34.0 -ipython-genutils==0.2.0 -ipywidgets==8.1.3 -isoduration==20.11.0 -isort==5.11.5 -jedi==0.18.2 -jinja2==3.1.4 -json5==0.9.16 -jsonpointer==3.0.0 -jsonschema==4.17.3 -jupyter-cache==0.5.0 -jupyter-client==7.4.9 -jupyter-core==4.12.0 -jupyter-events==0.6.3 -jupyter-lsp==1.5.1 -jupyter-server==1.24.0 -jupyter-server-fileid==0.9.2 -jupyter-server-mathjax==0.2.6 -jupyter-server-ydoc==0.8.0 -jupyter-ydoc==0.2.5 -jupyterlab==3.6.7 -jupyterlab-code-formatter==2.2.1 -jupyterlab-git==0.44.0 -jupyterlab-lsp==3.10.2 -jupyterlab-myst==1.2.0 -jupyterlab-pygments==0.2.2 -jupyterlab-server==2.24.0 -jupyterlab-widgets==3.0.11 -kiwisolver==1.4.5 -livereload==2.7.0 -lsprotocol==2023.0.1 -markdown-it-py==2.2.0 -markupsafe==2.1.5 -matplotlib==3.5.3 -matplotlib-inline==0.1.6 -mdit-py-plugins==0.3.5 -mdurl==0.1.2 -mistune==3.0.2 -mypy==1.4.1 -mypy-extensions==1.0.0 -myst-nb==0.17.2 -myst-parser==0.18.1 -nbclassic==1.1.0 -nbclient==0.5.13 -nbconvert==7.6.0 -nbdime==3.2.1 -nbformat==5.8.0 -nbmake==1.3.0 -nest-asyncio==1.6.0 -nodeenv==1.9.1 -notebook==6.5.7 -notebook-shim==0.2.4 -numpy==1.21.6 -packaging==24.0 -pandas==1.1.5 -pandocfilters==1.5.1 -parso==0.8.4 -pathspec==0.11.2 -pexpect==4.9.0 -pickleshare==0.7.5 -pillow==9.5.0 -pkgutil-resolve-name==1.3.10 -platformdirs==4.0.0 -pluggy==1.2.0 -pre-commit==2.21.0 -prometheus-client==0.17.1 -prompt-toolkit==3.0.47 -psutil==6.0.0 -ptyprocess==0.7.0 -pycparser==2.21 -pydantic==1.10.17 -pydata-sphinx-theme==0.13.3 -pygments==2.17.2 -pyparsing==3.1.2 -pyproject-api==1.5.3 -pyrsistent==0.19.3 -pytest==7.4.4 -pytest-cov==4.1.0 -pytest-profiling==1.7.0 -pytest-xdist==3.5.0 -python-dateutil==2.9.0.post0 -python-json-logger==2.0.7 -python-lsp-jsonrpc==1.0.0 -python-lsp-ruff==1.6.0 -python-lsp-server==1.7.4 -pytoolconfig==1.3.0 -pytz==2024.1 -pyyaml==6.0.1 -pyzmq==26.0.3 -requests==2.31.0 -rfc3339-validator==0.1.4 -rfc3986-validator==0.1.1 -rope==1.9.0 -ruff==0.1.15 -send2trash==1.8.3 -six==1.16.0 -smmap==5.0.1 -sniffio==1.3.1 -snowballstemmer==2.2.0 -soupsieve==2.4.1 -sphinx==5.3.0 -sphinx-api-relink==0.0.9 -sphinx-autobuild==2021.3.14 -sphinx-book-theme==1.0.1 -sphinx-codeautolink==0.15.2 -sphinx-copybutton==0.5.2 -sphinx-thebe==0.2.1 -sphinx-togglebutton==0.3.2 -sphinxcontrib-applehelp==1.0.2 -sphinxcontrib-devhelp==1.0.2 -sphinxcontrib-htmlhelp==2.0.0 -sphinxcontrib-jsmath==1.0.1 -sphinxcontrib-qthelp==1.0.3 -sphinxcontrib-serializinghtml==1.1.5 -sqlalchemy==1.4.52 -tabulate==0.9.0 -terminado==0.17.1 -tinycss2==1.2.1 -tomli==2.0.1 -tornado==6.2 -tox==4.8.0 -traitlets==5.9.0 -typed-ast==1.5.5 -typing-extensions==4.7.1 -ujson==5.7.0 -uproot==5.0.13 -uri-template==1.3.0 -urllib3==2.0.7 -virtualenv==20.26.3 -wcwidth==0.2.13 -webcolors==1.13 -webencodings==0.5.1 -websocket-client==1.6.1 -wheel==0.42.0 -widgetsnbextension==4.0.11 -y-py==0.6.2 -ypy-websocket==0.8.4 -zipp==3.15.0 - -# The following packages were excluded from the output: -# setuptools diff --git a/.constraints/py3.8.txt b/.constraints/py3.8.txt deleted file mode 100644 index 04f708d..0000000 --- a/.constraints/py3.8.txt +++ /dev/null @@ -1,199 +0,0 @@ -# This file was autogenerated by uv via the following command: -# uv pip compile pyproject.toml -o .constraints/py3.8.txt --all-extras --no-annotate --python-version=3.8 --no-emit-package setuptools -accessible-pygments==0.0.4 -alabaster==0.7.13 -anyio==4.4.0 -argon2-cffi==23.1.0 -argon2-cffi-bindings==21.2.0 -arrow==1.3.0 -asttokens==2.4.1 -async-lru==2.0.4 -attrs==23.2.0 -awkward==2.6.6 -awkward-cpp==35 -babel==2.15.0 -backcall==0.2.0 -beautifulsoup4==4.12.3 -black==24.4.2 -bleach==6.1.0 -cachetools==5.3.3 -cattrs==23.2.3 -certifi==2024.6.2 -cffi==1.16.0 -cfgv==3.4.0 -chardet==5.2.0 -charset-normalizer==3.3.2 -click==8.1.7 -colorama==0.4.6 -comm==0.2.2 -contourpy==1.1.1 -coverage==7.5.4 -cramjam==2.8.3 -cycler==0.12.1 -debugpy==1.8.2 -decorator==5.1.1 -defusedxml==0.7.1 -distlib==0.3.8 -docstring-to-markdown==0.15 -docutils==0.19 -exceptiongroup==1.2.1 -execnet==2.1.1 -executing==2.0.1 -fastjsonschema==2.20.0 -filelock==3.15.4 -fonttools==4.53.0 -fqdn==1.5.1 -fsspec==2024.6.1 -gitdb==4.0.11 -gitpython==3.1.43 -gprof2dot==2024.6.6 -greenlet==3.0.3 -h11==0.14.0 -httpcore==1.0.5 -httpx==0.27.0 -identify==2.5.36 -idna==3.7 -imagesize==1.4.1 -importlib-metadata==8.0.0 -importlib-resources==6.4.0 -iniconfig==2.0.0 -ipykernel==6.29.5 -ipython==8.12.3 -ipywidgets==8.1.3 -isoduration==20.11.0 -isort==5.13.2 -jedi==0.19.1 -jinja2==3.1.4 -json5==0.9.25 -jsonpointer==3.0.0 -jsonschema==4.22.0 -jsonschema-specifications==2023.12.1 -jupyter-cache==0.6.1 -jupyter-client==8.6.2 -jupyter-core==5.7.2 -jupyter-events==0.10.0 -jupyter-lsp==2.2.5 -jupyter-server==2.14.1 -jupyter-server-mathjax==0.2.6 -jupyter-server-terminals==0.5.3 -jupyterlab==4.2.3 -jupyterlab-code-formatter==2.2.1 -jupyterlab-git==0.50.1 -jupyterlab-lsp==5.1.0 -jupyterlab-myst==2.4.2 -jupyterlab-pygments==0.3.0 -jupyterlab-server==2.27.2 -jupyterlab-widgets==3.0.11 -kiwisolver==1.4.5 -livereload==2.7.0 -lsprotocol==2023.0.1 -markdown-it-py==2.2.0 -markupsafe==2.1.5 -matplotlib==3.7.5 -matplotlib-inline==0.1.7 -mdit-py-plugins==0.3.5 -mdurl==0.1.2 -mistune==3.0.2 -mypy==1.10.1 -mypy-extensions==1.0.0 -myst-nb==0.17.2 -myst-parser==0.18.1 -nbclient==0.6.8 -nbconvert==7.16.4 -nbdime==4.0.1 -nbformat==5.10.4 -nbmake==1.5.4 -nest-asyncio==1.6.0 -nodeenv==1.9.1 -notebook-shim==0.2.4 -numpy==1.24.4 -overrides==7.7.0 -packaging==24.1 -pandas==2.0.3 -pandocfilters==1.5.1 -parso==0.8.4 -pathspec==0.12.1 -pexpect==4.9.0 -pickleshare==0.7.5 -pillow==10.4.0 -pkgutil-resolve-name==1.3.10 -platformdirs==4.2.2 -pluggy==1.5.0 -pre-commit==3.5.0 -prometheus-client==0.20.0 -prompt-toolkit==3.0.47 -psutil==6.0.0 -ptyprocess==0.7.0 -pure-eval==0.2.2 -pycparser==2.22 -pydata-sphinx-theme==0.14.4 -pygments==2.18.0 -pyparsing==3.1.2 -pyproject-api==1.7.1 -pytest==8.2.2 -pytest-cov==5.0.0 -pytest-profiling==1.7.0 -pytest-xdist==3.6.1 -python-dateutil==2.9.0.post0 -python-json-logger==2.0.7 -python-lsp-jsonrpc==1.1.2 -python-lsp-ruff==2.2.1 -python-lsp-server==1.11.0 -pytoolconfig==1.3.1 -pytz==2024.1 -pyyaml==6.0.1 -pyzmq==26.0.3 -referencing==0.35.1 -requests==2.32.3 -rfc3339-validator==0.1.4 -rfc3986-validator==0.1.1 -rope==1.13.0 -rpds-py==0.18.1 -ruff==0.5.0 -send2trash==1.8.3 -six==1.16.0 -smmap==5.0.1 -sniffio==1.3.1 -snowballstemmer==2.2.0 -soupsieve==2.5 -sphinx==5.3.0 -sphinx-api-relink==0.0.9 -sphinx-autobuild==2021.3.14 -sphinx-book-theme==1.0.1 -sphinx-codeautolink==0.15.2 -sphinx-copybutton==0.5.2 -sphinx-thebe==0.3.1 -sphinx-togglebutton==0.3.2 -sphinxcontrib-applehelp==1.0.4 -sphinxcontrib-devhelp==1.0.2 -sphinxcontrib-htmlhelp==2.0.1 -sphinxcontrib-jsmath==1.0.1 -sphinxcontrib-qthelp==1.0.3 -sphinxcontrib-serializinghtml==1.1.5 -sqlalchemy==2.0.31 -stack-data==0.6.3 -tabulate==0.9.0 -terminado==0.18.1 -tinycss2==1.3.0 -tomli==2.0.1 -tornado==6.4.1 -tox==4.15.1 -traitlets==5.14.3 -types-python-dateutil==2.9.0.20240316 -typing-extensions==4.12.2 -tzdata==2024.1 -ujson==5.10.0 -uproot==5.3.9 -uri-template==1.3.0 -urllib3==2.2.2 -virtualenv==20.26.3 -wcwidth==0.2.13 -webcolors==24.6.0 -webencodings==0.5.1 -websocket-client==1.8.0 -wheel==0.43.0 -widgetsnbextension==4.0.11 -zipp==3.19.2 - -# The following packages were excluded from the output: -# setuptools diff --git a/.constraints/py3.9.txt b/.constraints/py3.9.txt deleted file mode 100644 index ceb2e2b..0000000 --- a/.constraints/py3.9.txt +++ /dev/null @@ -1,199 +0,0 @@ -# This file was autogenerated by uv via the following command: -# uv pip compile pyproject.toml -o .constraints/py3.9.txt --all-extras --no-annotate --python-version=3.9 --no-emit-package setuptools -accessible-pygments==0.0.5 -alabaster==0.7.16 -anyio==4.4.0 -argon2-cffi==23.1.0 -argon2-cffi-bindings==21.2.0 -arrow==1.3.0 -asttokens==2.4.1 -async-lru==2.0.4 -attrs==23.2.0 -awkward==2.6.6 -awkward-cpp==35 -babel==2.15.0 -beautifulsoup4==4.12.3 -black==24.4.2 -bleach==6.1.0 -cachetools==5.3.3 -cattrs==23.2.3 -certifi==2024.6.2 -cffi==1.16.0 -cfgv==3.4.0 -chardet==5.2.0 -charset-normalizer==3.3.2 -click==8.1.7 -colorama==0.4.6 -comm==0.2.2 -contourpy==1.2.1 -coverage==7.5.4 -cramjam==2.8.3 -cycler==0.12.1 -debugpy==1.8.2 -decorator==5.1.1 -defusedxml==0.7.1 -distlib==0.3.8 -docstring-to-markdown==0.15 -docutils==0.21.2 -exceptiongroup==1.2.1 -execnet==2.1.1 -executing==2.0.1 -fastjsonschema==2.20.0 -filelock==3.15.4 -fonttools==4.53.0 -fqdn==1.5.1 -fsspec==2024.6.1 -gitdb==4.0.11 -gitpython==3.1.43 -gprof2dot==2024.6.6 -greenlet==3.0.3 -h11==0.14.0 -httpcore==1.0.5 -httpx==0.27.0 -identify==2.5.36 -idna==3.7 -imagesize==1.4.1 -importlib-metadata==8.0.0 -importlib-resources==6.4.0 -iniconfig==2.0.0 -ipykernel==6.29.5 -ipython==8.18.1 -ipywidgets==8.1.3 -isoduration==20.11.0 -isort==5.13.2 -jedi==0.19.1 -jinja2==3.1.4 -json5==0.9.25 -jsonpointer==3.0.0 -jsonschema==4.22.0 -jsonschema-specifications==2023.12.1 -jupyter-cache==1.0.0 -jupyter-client==8.6.2 -jupyter-core==5.7.2 -jupyter-events==0.10.0 -jupyter-lsp==2.2.5 -jupyter-server==2.14.1 -jupyter-server-mathjax==0.2.6 -jupyter-server-terminals==0.5.3 -jupyterlab==4.2.3 -jupyterlab-code-formatter==2.2.1 -jupyterlab-git==0.50.1 -jupyterlab-lsp==5.1.0 -jupyterlab-myst==2.4.2 -jupyterlab-pygments==0.3.0 -jupyterlab-server==2.27.2 -jupyterlab-widgets==3.0.11 -kiwisolver==1.4.5 -lsprotocol==2023.0.1 -markdown-it-py==3.0.0 -markupsafe==2.1.5 -matplotlib==3.9.0 -matplotlib-inline==0.1.7 -mdit-py-plugins==0.4.1 -mdurl==0.1.2 -mistune==3.0.2 -mypy==1.10.1 -mypy-extensions==1.0.0 -myst-nb==1.1.1 -myst-parser==3.0.1 -nbclient==0.6.8 -nbconvert==7.16.4 -nbdime==4.0.1 -nbformat==5.10.4 -nbmake==1.5.4 -nest-asyncio==1.6.0 -nodeenv==1.9.1 -notebook-shim==0.2.4 -numpy==2.0.0 -overrides==7.7.0 -packaging==24.1 -pandas==2.2.2 -pandocfilters==1.5.1 -parso==0.8.4 -pathspec==0.12.1 -pexpect==4.9.0 -pillow==10.4.0 -platformdirs==4.2.2 -pluggy==1.5.0 -pre-commit==3.7.1 -prometheus-client==0.20.0 -prompt-toolkit==3.0.47 -psutil==6.0.0 -ptyprocess==0.7.0 -pure-eval==0.2.2 -pycparser==2.22 -pydata-sphinx-theme==0.15.4 -pygments==2.18.0 -pyparsing==3.1.2 -pyproject-api==1.7.1 -pytest==8.2.2 -pytest-cov==5.0.0 -pytest-profiling==1.7.0 -pytest-xdist==3.6.1 -python-dateutil==2.9.0.post0 -python-json-logger==2.0.7 -python-lsp-jsonrpc==1.1.2 -python-lsp-ruff==2.2.1 -python-lsp-server==1.11.0 -pytoolconfig==1.3.1 -pytz==2024.1 -pyyaml==6.0.1 -pyzmq==26.0.3 -referencing==0.35.1 -requests==2.32.3 -rfc3339-validator==0.1.4 -rfc3986-validator==0.1.1 -rope==1.13.0 -rpds-py==0.18.1 -ruff==0.5.0 -send2trash==1.8.3 -six==1.16.0 -smmap==5.0.1 -sniffio==1.3.1 -snowballstemmer==2.2.0 -soupsieve==2.5 -sphinx==7.3.7 -sphinx-api-relink==0.0.9 -sphinx-autobuild==2024.4.16 -sphinx-book-theme==1.1.3 -sphinx-codeautolink==0.15.2 -sphinx-copybutton==0.5.2 -sphinx-thebe==0.3.1 -sphinx-togglebutton==0.3.2 -sphinxcontrib-applehelp==1.0.8 -sphinxcontrib-devhelp==1.0.6 -sphinxcontrib-htmlhelp==2.0.5 -sphinxcontrib-jsmath==1.0.1 -sphinxcontrib-qthelp==1.0.7 -sphinxcontrib-serializinghtml==1.1.10 -sqlalchemy==2.0.31 -stack-data==0.6.3 -starlette==0.37.2 -tabulate==0.9.0 -terminado==0.18.1 -tinycss2==1.3.0 -tomli==2.0.1 -tornado==6.4.1 -tox==4.15.1 -traitlets==5.14.3 -types-python-dateutil==2.9.0.20240316 -typing-extensions==4.12.2 -tzdata==2024.1 -ujson==5.10.0 -uproot==5.3.9 -uri-template==1.3.0 -urllib3==2.2.2 -uvicorn==0.30.1 -virtualenv==20.26.3 -watchfiles==0.22.0 -wcwidth==0.2.13 -webcolors==24.6.0 -webencodings==0.5.1 -websocket-client==1.8.0 -websockets==12.0 -wheel==0.43.0 -widgetsnbextension==4.0.11 -zipp==3.19.2 - -# The following packages were excluded from the output: -# setuptools diff --git a/.cspell.json b/.cspell.json index cd2b9ae..1996236 100644 --- a/.cspell.json +++ b/.cspell.json @@ -13,24 +13,20 @@ "transisions" ], "ignorePaths": [ - "**/*.rst_t", "**/.cspell.json", "*.root", - "*.rst_t", - ".constraints/*.txt", ".editorconfig", + ".envrc", ".gitignore", - ".gitpod.*", ".pre-commit-config.yaml", ".prettierignore", ".vscode/*", "codecov.yml", - "docs/_templates/*", "docs/conf.py", - "pyproject.toml", - "tox.ini" + "pyproject.toml" ], "ignoreWords": [ + "FURB", "MAINT", "apidoc", "atol", @@ -65,6 +61,7 @@ "ipykernel", "ipynb", "isclose", + "isna", "isort", "kernelspec", "lineparser", @@ -83,6 +80,7 @@ "prereleased", "pygments", "pyplot", + "pyproject", "pyright", "realpath", "rtfd", diff --git a/.editorconfig b/.editorconfig index cd9b915..90b23ef 100644 --- a/.editorconfig +++ b/.editorconfig @@ -16,8 +16,5 @@ indent_size = 4 [LICENSE] indent_size = unset -[*.rst_t] -indent_size = 3 - -[setup.cfg] +[uv.lock] indent_size = 4 diff --git a/.envrc b/.envrc new file mode 100644 index 0000000..41fd2ca --- /dev/null +++ b/.envrc @@ -0,0 +1,2 @@ +uv sync --all-extras --quiet +source .venv/bin/activate diff --git a/.github/workflows/cd.yml b/.github/workflows/cd.yml index 54ae3bc..cf34984 100644 --- a/.github/workflows/cd.yml +++ b/.github/workflows/cd.yml @@ -9,9 +9,9 @@ on: jobs: milestone: if: startsWith(github.ref, 'refs/tags') - uses: ComPWA/actions/.github/workflows/close-milestone.yml@v1 + uses: ComPWA/actions/.github/workflows/close-milestone.yml@v2 package-name: - uses: ComPWA/actions/.github/workflows/get-pypi-name.yml@v1 + uses: ComPWA/actions/.github/workflows/get-pypi-name.yml@v2 pypi: environment: name: PyPI @@ -22,11 +22,11 @@ jobs: - package-name permissions: id-token: write - runs-on: ubuntu-22.04 + runs-on: ubuntu-24.04 steps: - - uses: ComPWA/actions/build-pypi-distribution@v1 + - uses: ComPWA/actions/build-pypi-distribution@v2 - uses: pypa/gh-action-pypi-publish@release/v1 push: if: startsWith(github.ref, 'refs/tags') && !github.event.release.prerelease secrets: inherit - uses: ComPWA/actions/.github/workflows/push-to-version-branches.yml@v1 + uses: ComPWA/actions/.github/workflows/push-to-version-branches.yml@v2 diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 2c5622c..d8eb6a1 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -28,7 +28,7 @@ on: jobs: doc: - uses: ComPWA/actions/.github/workflows/ci-docs.yml@v1 + uses: ComPWA/actions/.github/workflows/ci-docs.yml@v2 permissions: pages: write id-token: write @@ -36,7 +36,7 @@ jobs: gh-pages: true specific-pip-packages: ${{ inputs.specific-pip-packages }} pytest: - uses: ComPWA/actions/.github/workflows/pytest.yml@v1 + uses: ComPWA/actions/.github/workflows/pytest.yml@v2 with: coverage-target: pawian macos-python-version: "3.9" @@ -45,4 +45,4 @@ jobs: if: inputs.specific-pip-packages == '' secrets: token: ${{ secrets.PAT }} - uses: ComPWA/actions/.github/workflows/pre-commit.yml@v1 + uses: ComPWA/actions/.github/workflows/pre-commit.yml@v2 diff --git a/.github/workflows/clean-caches.yml b/.github/workflows/clean-caches.yml index a66c407..7986e0c 100644 --- a/.github/workflows/clean-caches.yml +++ b/.github/workflows/clean-caches.yml @@ -14,9 +14,9 @@ on: jobs: cleanup: name: Remove caches - runs-on: ubuntu-22.04 + runs-on: ubuntu-24.04 steps: - - uses: ComPWA/actions/clean-caches@v1 + - uses: ComPWA/actions/clean-caches@v2 with: GH_TOKEN: ${{ secrets.GITHUB_TOKEN }} ref: ${{ inputs.ref }} diff --git a/.github/workflows/requirements.yml b/.github/workflows/lock.yml similarity index 68% rename from .github/workflows/requirements.yml rename to .github/workflows/lock.yml index ec42f28..6a13858 100644 --- a/.github/workflows/requirements.yml +++ b/.github/workflows/lock.yml @@ -1,4 +1,4 @@ -name: Requirements +name: Update concurrency: group: ${{ github.workflow }}-${{ github.ref }} @@ -11,14 +11,12 @@ on: - main - epic/* paths: - - .constraints/py3.*.txt - .pre-commit-config.yaml - schedule: - - cron: "0 3 7 */2 *" + - uv.lock workflow_dispatch: jobs: - requirements: - uses: ComPWA/actions/.github/workflows/requirements.yml@v1 + lock: + uses: ComPWA/actions/.github/workflows/lock.yml@v2 secrets: token: ${{ secrets.PAT }} diff --git a/.github/workflows/pr-linting.yml b/.github/workflows/pr-linting.yml index 0fab841..44dc9e4 100644 --- a/.github/workflows/pr-linting.yml +++ b/.github/workflows/pr-linting.yml @@ -11,4 +11,4 @@ on: jobs: lint-pr: - uses: ComPWA/actions/.github/workflows/pr-linting.yml@v1 + uses: ComPWA/actions/.github/workflows/pr-linting.yml@v2 diff --git a/.github/workflows/release-drafter.yml b/.github/workflows/release-drafter.yml index 5234093..32c6579 100644 --- a/.github/workflows/release-drafter.yml +++ b/.github/workflows/release-drafter.yml @@ -9,7 +9,7 @@ on: jobs: update_release_draft: - runs-on: ubuntu-22.04 + runs-on: ubuntu-24.04 steps: - uses: release-drafter/release-drafter@v6 env: diff --git a/.gitignore b/.gitignore index 6d76ca0..e6ce667 100644 --- a/.gitignore +++ b/.gitignore @@ -26,7 +26,6 @@ version.py # Temporary files *.pyc -*condaenv.* .coverage .coverage.* .ipynb_checkpoints/ @@ -55,7 +54,6 @@ pyvenv*/ !.readthedocs.yml !.vscode/*.json !codecov.yml -!environment.yml !pyrightconfig.json !/src/pawian/samples/* diff --git a/.gitpod.yml b/.gitpod.yml deleted file mode 100644 index 29d758d..0000000 --- a/.gitpod.yml +++ /dev/null @@ -1,38 +0,0 @@ -tasks: - - init: pyenv local 3.9 - - init: pip install -c .constraints/py3.9.txt -e .[dev] - -github: - prebuilds: - master: true - branches: false - pullRequests: true - pullRequestsFromForks: true - addComment: false - addBadge: false - addLabel: false - -vscode: - extensions: - - charliermarsh.ruff - - christian-kohler.path-intellisense - - eamodio.gitlens - - editorconfig.editorconfig - - esbenp.prettier-vscode - - executablebookproject.myst-highlight - - github.vscode-github-actions - - github.vscode-pull-request-github - - ms-python.mypy-type-checker - - ms-python.python - - ms-python.vscode-pylance - - ms-vscode-remote.remote-ssh - - ms-vscode.live-server - - ms-vsliveshare.vsliveshare - - redhat.vscode-yaml - - ryanluker.vscode-coverage-gutters - - soulcode.vscode-unwanted-extensions - - stkb.rewrap - - streetsidesoftware.code-spell-checker - - tamasfe.even-better-toml - - trentrand.git-commit-helper-vscode - - yzhang.markdown-all-in-one diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index 801e712..25e4d92 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -1,11 +1,10 @@ ci: - autoupdate_commit_msg: "MAINT: update pip constraints and pre-commit" + autoupdate_commit_msg: "MAINT: update lock files" autoupdate_schedule: quarterly skip: - mypy - - prettier - pyright - - taplo + - uv-lock repos: - repo: meta @@ -13,17 +12,30 @@ repos: - id: check-hooks-apply - id: check-useless-excludes + - repo: https://github.com/ComPWA/policy + rev: dbeb73fe2afcabe3006b1fc46eea1bf815ee6bc4 + hooks: + - id: check-dev-files + args: + - --repo-name=pawian-tools + - --repo-organization=RUB-EP1 + - --repo-title=Pawian Tools + - id: remove-empty-tags + - repo: https://github.com/kynan/nbstripout rev: 0.7.1 hooks: - id: nbstripout args: + - --drop-empty-cells - --extra-keys - | cell.attachments cell.metadata.code_folding + cell.metadata.editable cell.metadata.id cell.metadata.pycharm + cell.metadata.slideshow cell.metadata.user_expressions metadata.celltoolbar metadata.colab.name @@ -39,7 +51,7 @@ repos: metadata.vscode - repo: https://github.com/astral-sh/ruff-pre-commit - rev: v0.5.0 + rev: v0.7.1 hooks: - id: ruff args: [--fix] @@ -48,7 +60,7 @@ repos: types_or: [python, pyi, jupyter] - repo: https://github.com/pre-commit/pre-commit-hooks - rev: v4.6.0 + rev: v5.0.0 hooks: - id: check-ast - id: check-case-conflict @@ -65,15 +77,15 @@ repos: args: ["--django"] - id: trailing-whitespace - - repo: https://github.com/pre-commit/mirrors-prettier - rev: v4.0.0-alpha.8 + - repo: https://github.com/ComPWA/prettier-pre-commit + rev: v3.3.3 hooks: - id: prettier - - repo: https://github.com/ComPWA/mirrors-taplo - rev: v0.8.1 + - repo: https://github.com/ComPWA/taplo-pre-commit + rev: v0.9.3 hooks: - - id: taplo + - id: taplo-format - repo: https://github.com/pappasam/toml-sort rev: v0.23.1 @@ -82,24 +94,13 @@ repos: args: - --in-place - - repo: https://github.com/ComPWA/policy - rev: 0.3.9 - hooks: - - id: check-dev-files - args: - - --no-prettierrc - - --pin-requirements=bimonthly - - --repo-name=pawian-tools - - --repo-organization=RUB-EP1 - - --repo-title=Pawian Tools - - repo: https://github.com/streetsidesoftware/cspell-cli - rev: v8.9.0 + rev: v8.15.2 hooks: - id: cspell - repo: https://github.com/editorconfig-checker/editorconfig-checker.python - rev: 2.7.3 + rev: 3.0.3 hooks: - id: editorconfig-checker name: editorconfig @@ -119,7 +120,12 @@ repos: types: - python - - repo: https://github.com/ComPWA/mirrors-pyright - rev: v1.1.369 + - repo: https://github.com/ComPWA/pyright-pre-commit + rev: v1.1.386 hooks: - id: pyright + + - repo: https://github.com/astral-sh/uv-pre-commit + rev: 0.4.27 + hooks: + - id: uv-lock diff --git a/.python-version b/.python-version new file mode 100644 index 0000000..e4fba21 --- /dev/null +++ b/.python-version @@ -0,0 +1 @@ +3.12 diff --git a/.vscode/extensions.json b/.vscode/extensions.json index 82d6e46..afebcf6 100644 --- a/.vscode/extensions.json +++ b/.vscode/extensions.json @@ -8,6 +8,7 @@ "executablebookproject.myst-highlight", "github.vscode-github-actions", "github.vscode-pull-request-github", + "mhutchie.git-graph", "ms-python.mypy-type-checker", "ms-python.python", "ms-python.vscode-pylance", @@ -20,7 +21,6 @@ "stkb.rewrap", "streetsidesoftware.code-spell-checker", "tamasfe.even-better-toml", - "trentrand.git-commit-helper-vscode", "yzhang.markdown-all-in-one" ], "unwantedRecommendations": [ diff --git a/.vscode/settings.json b/.vscode/settings.json index 196ee56..938a6c8 100644 --- a/.vscode/settings.json +++ b/.vscode/settings.json @@ -26,11 +26,11 @@ "[yaml]": { "editor.defaultFormatter": "esbenp.prettier-vscode" }, + "cSpell.enabled": true, "coverage-gutters.coverageFileNames": ["coverage.xml"], "coverage-gutters.coverageReportFileName": "**/htmlcov/index.html", "coverage-gutters.showGutterCoverage": false, "coverage-gutters.showLineCoverage": true, - "cSpell.enabled": true, "diffEditor.experimental.showMoves": true, "editor.formatOnSave": true, "git.rebaseWhenSync": true, @@ -47,8 +47,8 @@ "notebook.gotoSymbols.showAllSymbols": true, "python.analysis.autoImportCompletions": false, "python.analysis.inlayHints.pytestParameters": true, - "python.analysis.typeCheckingMode": "strict", "python.languageServer": "Pylance", + "python.terminal.activateEnvironment": false, "python.testing.pytestArgs": ["--color=no", "--no-cov"], "python.testing.pytestEnabled": true, "python.testing.unittestEnabled": false, @@ -58,8 +58,8 @@ "ruff.importStrategy": "fromEnvironment", "ruff.organizeImports": true, "search.exclude": { + "**/uv.lock": true, "*/.pydocstyle": true, - ".constraints/*.txt": true, "tests/**/__init__.py": true }, "telemetry.telemetryLevel": "off" diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md index 426d891..6c71942 100644 --- a/CONTRIBUTING.md +++ b/CONTRIBUTING.md @@ -1,4 +1,44 @@ # How to contribute? -See instructions at -[compwa-org.rtfd.io/develop.html](https://compwa-org.rtfd.io/develop.html)! +[![Open in Visual Studio Code](https://img.shields.io/badge/vscode-open-blue?logo=visualstudiocode)](https://github.dev/RUB-EP1/pawian-tools) + +> [!TIP] +> This package is part of the [ComPWA Organization](https://github.com/ComPWA). For more information about how to contribute to the packages, go to **[compwa.github.io/develop](https://compwa.github.io/develop)**! + +To contribute to the project, you need to install the package in a virtual environment. This can be done best with [`uv`](https://docs.astral.sh/uv) (see installation instructions [here](https://docs.astral.sh/uv/getting-started/installation)). For this, you first need to get the source code with [Git](https://git-scm.com): + +```shell +git clone https://github.com/RUB-EP1/pawian-tools +cd pawian-tools +``` + +Now it's simply a matter of creating and activating the [virtual environment](https://docs.astral.sh/uv/pip/environments) with [`uv sync`](https://docs.astral.sh/uv/reference/cli/#uv-sync). The dependencies for the project are 'pinned' in each commit through the [`uv.lock` file](https://docs.astral.sh/uv/concepts/projects/#project-lockfile). + +```shell +uv sync +source .venv/bin/activate +``` + +Formatting and linting checks are automatically performed when committing changes. This is done with [pre-commit](https://pre-commit.com). To install the hooks in your local repository, run install `pre-commit` with `uv`: + +```shell +uv tool install pre-commit --with pre-commit-uv --force-reinstall +``` + +and [`pre-commit install`](https://pre-commit.com/#3-install-the-git-hook-scripts) **once**: + +```shell +pre-commit install --install-hooks +``` + +In addition, it may be handy to install `tox`: + +```shell +uv tool install tox --with tox-uv +``` + +If the repository provides a Tox configuration under [`pyproject.toml`](./pyproject.toml), you can see which jobs it defines with: + +```shell +tox list +``` diff --git a/README.md b/README.md index d9da2f1..273c1e4 100644 --- a/README.md +++ b/README.md @@ -4,17 +4,16 @@ [![Binder](https://static.mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/RUB-EP1/pawian-tools/stable?filepath=docs/usage) [![Google Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/RUB-EP1/pawian-tools/blob/main) [![GPLv3+ license](https://img.shields.io/badge/License-GPLv3+-blue.svg)](https://www.gnu.org/licenses/gpl-3.0-standalone.html) -[![GitPod](https://img.shields.io/badge/gitpod-open-blue?logo=gitpod)](https://gitpod.io/#https://github.com/RUB-EP1/pawian-tools) + +[![uv](https://img.shields.io/endpoint?url=https://raw.githubusercontent.com/astral-sh/uv/main/assets/badge/v0.json)](https://github.com/astral-sh/uv) +[![Ruff](https://img.shields.io/endpoint?url=https://raw.githubusercontent.com/charliermarsh/ruff/main/assets/badge/v2.json)](https://github.com/astral-sh/ruff) [![code style: prettier](https://img.shields.io/badge/code_style-prettier-ff69b4.svg?style=flat-square)](https://github.com/prettier/prettier) [![Spelling checked](https://img.shields.io/badge/cspell-checked-brightgreen.svg)](https://github.com/streetsidesoftware/cspell/tree/master/packages/cspell) -
[![Checked with mypy](http://www.mypy-lang.org/static/mypy_badge.svg)](https://mypy.readthedocs.io) -
+[![Checked with mypy](http://www.mypy-lang.org/static/mypy_badge.svg)](https://mypy.readthedocs.io) [![CI status](https://github.com/RUB-EP1/pawian-tools/workflows/CI/badge.svg)](https://github.com/RUB-EP1/pawian-tools/actions?query=branch%3Amain+workflow%3ACI) [![Test coverage](https://codecov.io/gh/RUB-EP1/pawian-tools/branch/main/graph/badge.svg)](https://codecov.io/gh/RUB-EP1/pawian-tools) -
[![pre-commit](https://img.shields.io/badge/pre--commit-enabled-brightgreen)](https://github.com/pre-commit/pre-commit) [![Prettier](https://camo.githubusercontent.com/687a8ae8d15f9409617d2cc5a30292a884f6813a/68747470733a2f2f696d672e736869656c64732e696f2f62616467652f636f64655f7374796c652d70726574746965722d6666363962342e7376673f7374796c653d666c61742d737175617265)](https://prettier.io/) -[![Ruff](https://img.shields.io/endpoint?url=https://raw.githubusercontent.com/charliermarsh/ruff/main/assets/badge/v2.json)](https://github.com/astral-sh/ruff) Go to [rub-ep1.github.io/pawian-tools](https://rub-ep1.github.io/pawian-tools) to view the documentation! diff --git a/docs/_templates/genindex.html b/docs/_templates/genindex.html deleted file mode 100644 index 21849ec..0000000 --- a/docs/_templates/genindex.html +++ /dev/null @@ -1,55 +0,0 @@ -{% macro indexentries(firstname, links) %} {%- if links -%} - - {%- if links[0][0] %}{% endif -%} {{ firstname|e }} {%- if links[0][0] %}{% endif -%} - - -{%- for ismain, link in links[1:] -%} , -{% if ismain %}{% endif -%} [{{ loop.index }}] {%- if ismain %}{% endif -%} - -{%- endfor %} {%- else %} {{ firstname|e }} {%- endif %} {% endmacro %} {%- -extends "layout.html" %} {% set title = _('Index') %} {% block body %} - -

{{ _('Index') }}

- -
- {% for key, dummy in genindexentries -%} - {{ key }} - {% if not loop.last %}| {% endif %} {%- endfor %} -
- -{%- for key, entries in genindexentries %} -

{{ key }}

- - - {%- for entryname, (links, subitems, _) in entries %} -
  • - {{ indexentries(entryname, links) }} {%- if subitems %} - - {%- endif -%} -
    • - {%- endfor %} - -
    -{% endfor %} {% endblock %} {% block sidebarrel %} {% if split_index %} -

    {{ _('Index') }}

    -

    - {% for key, dummy in genindexentries -%} - {{ key }} - {% if not loop.last %}| {% endif %} {%- endfor %} -

    - -

    - {{ _('Full index on one page') }} -

    -{% endif %} {{ super() }} {% endblock %} diff --git a/docs/_templates/layout.html b/docs/_templates/layout.html deleted file mode 100644 index 25d65cd..0000000 --- a/docs/_templates/layout.html +++ /dev/null @@ -1,4 +0,0 @@ -{% extends "!layout.html" %} {% block menu %} {{ super() }} -Module Index (API) -General Index -{% endblock %} diff --git a/docs/_templates/module.rst_t b/docs/_templates/module.rst_t deleted file mode 100644 index 8ce1b5a..0000000 --- a/docs/_templates/module.rst_t +++ /dev/null @@ -1,8 +0,0 @@ -{%- if show_headings and not separate %} -{{ basename.split(".")[-1] | e | heading }} - -{% endif -%} -.. automodule:: {{ qualname }} -{%- for option in automodule_options %} - :{{ option }}: -{%- endfor %} diff --git a/docs/_templates/package.rst_t b/docs/_templates/package.rst_t deleted file mode 100644 index d62bb94..0000000 --- a/docs/_templates/package.rst_t +++ /dev/null @@ -1,44 +0,0 @@ -{%- macro automodule(modname, options) -%} -.. automodule:: {{ modname }} -{%- for option in options %} - :{{ option }}: -{%- endfor %} -{%- endmacro %} - -{%- macro toctree(docnames) -%} -.. toctree:: -{% for docname in docnames %} - {{ docname }} -{%- endfor %} -{%- endmacro %} - -{{ pkgname.split(".")[-1] | e | heading }} -{%- if modulefirst and not is_namespace %} -{{ automodule(pkgname, automodule_options) }} -{% endif %} - -{%- if not modulefirst and not is_namespace %} - -{{ automodule(pkgname, automodule_options) }} -{% endif %} - -{%- if submodules or subpackages %} -.. rubric:: Submodules and Subpackages -{% endif %} - -{%- if subpackages %} - -{{ toctree(subpackages) }} -{% endif %} -{%- if submodules %} -{% if separatemodules %} -{{ toctree(submodules) }} -{%- else %} -{%- for submodule in submodules %} -{% if show_headings %} -{{- [submodule, "module"] | join(" ") | e | heading(2) }} -{% endif %} -{{ automodule(submodule, automodule_options) }} -{% endfor %} -{%- endif %} -{% endif %} diff --git a/docs/_templates/toc.rst_t b/docs/_templates/toc.rst_t deleted file mode 100644 index 878540c..0000000 --- a/docs/_templates/toc.rst_t +++ /dev/null @@ -1,7 +0,0 @@ -{{ header | heading }} - -.. toctree:: - :maxdepth: {{ maxdepth }} -{% for docname in docnames %} - {{ docname }} -{%- endfor %} diff --git a/docs/conf.py b/docs/conf.py index 1328ba0..63fd5fa 100644 --- a/docs/conf.py +++ b/docs/conf.py @@ -45,7 +45,7 @@ "members": True, "undoc-members": True, "show-inheritance": True, - "special-members": ", ".join([ + "special-members": ", ".join([ # noqa: FLY002 "__call__", "__eq__", ]), @@ -138,7 +138,7 @@ intersphinx_mapping = { "awkward": ("https://awkward-array.org/doc/stable", None), "IPython": (f"https://ipython.readthedocs.io/en/{pin('IPython')}", None), - "compwa-org": ("https://compwa-org.readthedocs.io", None), + "compwa": ("https://compwa.github.io", None), "matplotlib": (f"https://matplotlib.org/{pin('matplotlib')}", None), "numpy": (f"https://numpy.org/doc/{pin_minor('numpy')}", None), "pandas": ( diff --git a/docs/index.md b/docs/index.md index a9cf105..8525cf4 100644 --- a/docs/index.md +++ b/docs/index.md @@ -25,7 +25,7 @@ maxdepth: 2 install usage api -Help developing +Help developing Pawian ``` diff --git a/docs/install.md b/docs/install.md index 220f822..246e99c 100644 --- a/docs/install.md +++ b/docs/install.md @@ -10,7 +10,7 @@ This installs the latest version that you can find on the [`main`](https://github.com/RUB-EP1/pawian-tools/tree/main) branch. However, we highly recommend using the more dynamic, -{ref}`'editable installation' ` instead. This +{ref}`'editable installation' ` instead. This goes as follows: 1. Get the source code (see [the Pro Git Book](https://git-scm.com/book/en/v2)): @@ -21,11 +21,11 @@ goes as follows: ``` 2. **[Recommended]** Create a virtual environment (see - {ref}`here ` or the tip below). + {ref}`here ` or the tip below). 3. Install the project in - {ref}`'editable installation' ` with - {ref}`additional dependencies ` for the + {ref}`'editable installation' ` with + {ref}`additional dependencies ` for the developer: ```shell @@ -33,7 +33,7 @@ goes as follows: ``` That's all! Have a look at the {doc}`/usage` page to try out the package, and see -{doc}`compwa-org:develop` for tips on how to work with this 'editable' developer setup! +{doc}`compwa:develop` for tips on how to work with this 'editable' developer setup! :::{tip} @@ -47,7 +47,7 @@ conda activate pawian-tools ``` This way of installing is also safer, because it -{ref}`pins all dependencies `. Note you +{ref}`pins all dependencies `. Note you can also pin dependencies with `pip`, by running: ```shell diff --git a/environment.yml b/environment.yml deleted file mode 100644 index 7c4effc..0000000 --- a/environment.yml +++ /dev/null @@ -1,11 +0,0 @@ -name: pawian-tools -channels: - - defaults -dependencies: - - graphviz # for binder - - pip - - python==3.9.* - - pip: - - -c .constraints/py3.9.txt -e .[dev] -variables: - PRETTIER_LEGACY_CLI: "1" diff --git a/pyproject.toml b/pyproject.toml index 1d994b8..a263772 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -18,8 +18,6 @@ classifiers = [ "Programming Language :: Python :: 3.10", "Programming Language :: Python :: 3.11", "Programming Language :: Python :: 3.12", - "Programming Language :: Python :: 3.7", - "Programming Language :: Python :: 3.8", "Programming Language :: Python :: 3.9", "Programming Language :: Python", "Topic :: Scientific/Engineering :: Physics", @@ -27,11 +25,10 @@ classifiers = [ "Typing :: Typed", ] dependencies = [ - "awkward >=1", "matplotlib", "numpy", "pandas", - "uproot >=4", + "uproot", ] description = "Python helper tools for the Pawian framework" dynamic = ["version"] @@ -46,22 +43,32 @@ keywords = [ ] license = {text = "GPLv3 or later"} name = "pawian-tools" -requires-python = ">=3.7" +requires-python = ">=3.9" -[project.optional-dependencies] +[project.readme] +content-type = "text/markdown" +file = "README.md" + +[project.urls] +Changelog = "https://github.com/RUB-EP1/pawian-tools/releases" +Documentation = "http://rub-ep1.github.io/pawian-tools" +Source = "https://github.com/RUB-EP1/pawian-tools" +Tracker = "https://github.com/RUB-EP1/pawian-tools/issues" + +[dependency-groups] dev = [ - "pawian-tools[doc]", - "pawian-tools[jupyter]", - "pawian-tools[sty]", - "pawian-tools[test]", + "nbmake", + "ruff", "sphinx-autobuild", - "tox >=1.9", # for skip_install, use_develop + {include-group = "doc"}, + {include-group = "jupyter"}, + {include-group = "style"}, + {include-group = "test"}, ] doc = [ - "Sphinx >=3", - "ipywidgets", "myst-nb", - "sphinx-api-relink>=0.0.7", + "sphinx", + "sphinx-api-relink", "sphinx-book-theme", "sphinx-codeautolink[ipython]", "sphinx-copybutton", @@ -69,8 +76,6 @@ doc = [ "sphinx-togglebutton", ] jupyter = [ - "black", - "isort", "jupyterlab", "jupyterlab-code-formatter", "jupyterlab-git", @@ -79,46 +84,39 @@ jupyter = [ "python-lsp-ruff", "python-lsp-server[rope]", ] -sty = [ - "mypy >=0.730", - "pawian-tools[types]", - "pre-commit", - "ruff", +style = [ + "mypy", + {include-group = "types"}, ] test = [ - "nbmake", "pytest", "pytest-cov", "pytest-profiling", "pytest-xdist", ] -"types" = [ +types = [ "pytest", "sphinx-api-relink", ] -[project.readme] -content-type = "text/markdown" -file = "README.md" - -[project.urls] -Changelog = "https://github.com/RUB-EP1/pawian-tools/releases" -Documentation = "http://rub-ep1.github.io/pawian-tools" -Source = "https://github.com/RUB-EP1/pawian-tools" -Tracker = "https://github.com/RUB-EP1/pawian-tools/issues" - [tool.setuptools] include-package-data = false package-dir = {"" = "src"} [tool.setuptools.package-data] -pawian = ["samples/*"] +boostcfg = ["py.typed"] +pawian = [ + "py.typed", + "samples/*", +] [tool.setuptools.packages.find] namespaces = false where = ["src"] [tool.setuptools_scm] +local_scheme = "no-local-version" +version_scheme = "only-version" write_to = "src/pawian/version.py" [tool.coverage.report] @@ -167,6 +165,7 @@ exclude = [ "**/.mypy_cache", "**/.pytest_cache", "**/.tox", + "**/.venv/", "**/__pycache__", "**/_build", ] @@ -190,6 +189,8 @@ reportUnusedFunction = true reportUnusedImport = true reportUnusedVariable = true typeCheckingMode = "strict" +venv = ".venv" +venvPath = "." [tool.pytest.ini_options] addopts = [ @@ -229,46 +230,16 @@ src = [ "src", "tests", ] -target-version = "py37" [tool.ruff.format] docstring-code-format = true line-ending = "lf" [tool.ruff.lint] -extend-select = [ - "A", - "B", - "BLE", - "C4", - "C90", - "D", - "EM", - "ERA", - "FA", - "I", - "ICN", - "INP", - "ISC", - "N", - "NPY", - "PGH", - "PIE", - "PL", - "Q", - "RET", - "RSE", - "RUF", - "S", - "SIM", - "T20", - "TCH", - "TID", - "TRY", - "UP", - "YTT", -] ignore = [ + "ANN401", + "COM812", + "CPY001", "D101", "D102", "D103", @@ -278,22 +249,39 @@ ignore = [ "D213", "D407", "D416", + "DOC", "E501", + "FBT00", + "FURB101", + "FURB103", + "FURB140", + "G004", "ISC001", "PLW1514", + "PT001", + "PTH", "SIM108", "UP036", ] +select = ["ALL"] task-tags = ["cspell"] +[tool.ruff.lint.flake8-builtins] +builtins-ignorelist = ["display"] + +[tool.ruff.lint.flake8-comprehensions] +allow-dict-calls-with-keyword-arguments = true + [tool.ruff.lint.isort] split-on-trailing-comma = false [tool.ruff.lint.per-file-ignores] "*.ipynb" = [ + "ANN", "B018", "C90", "D", + "E303", "E402", "E703", "N806", @@ -320,6 +308,7 @@ split-on-trailing-comma = false ] "setup.py" = ["D100"] "tests/*" = [ + "ANN", "D", "INP001", "PGH001", @@ -329,6 +318,7 @@ split-on-trailing-comma = false "PLR2004", "PLR6301", "S101", + "SLF001", "T20", ] @@ -345,6 +335,109 @@ sort_first = [ "tool.setuptools", "tool.setuptools_scm", ] -sort_table_keys = true spaces_indent_inline_array = 4 trailing_comma_inline_array = true + +[tool.tox] +legacy_tox_ini = """ +[tox] +skip_install = True +skip_missing_interpreters=true +skipsdist = True +envlist = + cov, + docnb-force, + linkcheck, + sty, + +[testenv] +allowlist_externals = + pytest +commands = + pytest {posargs:tests} +description = Run all fast unit tests +passenv = * + +[testenv:cov] +allowlist_externals = + pytest +commands = + pytest {posargs:tests} \ + --cov-fail-under=85 \ + --cov-report=html \ + --cov-report=xml \ + --cov=boostcfg \ + --cov=pawian +description = Compute the test coverage of all unit tests + +[testenv:doc] +allowlist_externals = + sphinx-build +commands = + sphinx-build \ + --builder=html \ + --fail-on-warning \ + --keep-going \ + --show-traceback \ + docs/ docs/_build/html +description = Build documentation and API through Sphinx +passenv = * + +[testenv:docnb] +base = doc +description = {[testenv:doc]description} with cached notebook execution +setenv = + EXECUTE_NB = + +[testenv:docnb-force] +base = doc +description = {[testenv:doc]description} with notebook execution (no cache) +setenv = + FORCE_EXECUTE_NB = yes + +[testenv:doclive] +allowlist_externals = + sphinx-autobuild +commands = + sphinx-autobuild \ + --ignore=docs/_build \ + --ignore=docs/api \ + --open-browser \ + --port=0 \ + --re-ignore docs/.*\\.inv \ + --watch=docs \ + --watch=src \ + docs/ docs/_build/html +description = Set up a server to preview changes to the HTML pages live +passenv = * + +[testenv:docnblive] +base = doclive +description = {[testenv:doclive]description} with cached notebook execution +setenv = + EXECUTE_NB = yes + +[testenv:linkcheck] +allowlist_externals = + sphinx-build +commands = + sphinx-build \ + --builder=linkcheck \ + --show-traceback \ + docs/ docs/_build/linkcheck +description = Check external links in the documentation (requires internet connection) + +[testenv:nb] +allowlist_externals = + pytest +commands = + pytest --nbmake {posargs:docs} +description = Run all notebooks with pytest + +[testenv:sty] +allowlist_externals = + pre-commit +commands = + pre-commit run --all-files {posargs} +description = Perform all linting, formatting, and spelling checks +""" diff --git a/src/boostcfg/__init__.py b/src/boostcfg/__init__.py index 255f98c..cb409a8 100644 --- a/src/boostcfg/__init__.py +++ b/src/boostcfg/__init__.py @@ -31,7 +31,7 @@ def read_config(self, filename: str, reset: bool = True) -> None: if reset: self.__values = {} with open(filename) as stream: - for line in stream.readlines(): + for line in stream: self.append_value_from_line(line) def append_value_from_line(self, line: str) -> None: diff --git a/src/boostcfg/py.typed b/src/boostcfg/py.typed new file mode 100644 index 0000000..e69de29 diff --git a/src/pawian/data.py b/src/pawian/data.py index deb1b04..27ac432 100644 --- a/src/pawian/data.py +++ b/src/pawian/data.py @@ -25,7 +25,7 @@ from __future__ import annotations import sys -from typing import TYPE_CHECKING, Any, Iterable +from typing import TYPE_CHECKING, Any import awkward as ak import numpy as np @@ -34,6 +34,8 @@ from uproot.exceptions import KeyInFileError if TYPE_CHECKING: + from collections.abc import Iterable + from pandas.core.base import PandasObject if sys.version_info < (3, 8): @@ -174,7 +176,7 @@ def write_ascii(self, filename: str, **kwargs: Any) -> None: new_dict.append(self._obj[_WEIGHT_LABEL]) for par in self.particles: # cspell:ignore astype dropna - new_dict.append( + new_dict.append( # noqa: PERF401 self._obj[par].apply( lambda x: " ".join(x.dropna().astype(str)), axis=1, @@ -242,7 +244,7 @@ def read_ascii( # noqa: C901 # Try to determine number of particles from file if has_weights: - file_n_particles = py_values.index[py_values.isnull()][1] - 1 + file_n_particles = py_values.index[py_values.isna()][1] - 1 if particles is None: particles = [str(i) for i in range(1, file_n_particles + 1)] if isinstance(particles, int): diff --git a/src/pawian/py.typed b/src/pawian/py.typed new file mode 100644 index 0000000..e69de29 diff --git a/src/pawian/qa.py b/src/pawian/qa.py index 60d2b72..879aa3a 100644 --- a/src/pawian/qa.py +++ b/src/pawian/qa.py @@ -107,7 +107,7 @@ def draw_histogram( plot_on = plt # type: ignore[assignment] return plot_on.hist(edges, weights=values, bins=len(values), **kwargs) # type: ignore[call-arg,return-value,union-attr] - def draw_combined_histogram( # noqa: PLR0913 + def draw_combined_histogram( self, name: str, plot_on: Axes | None = None, @@ -140,8 +140,7 @@ def draw_combined_histogram( # noqa: PLR0913 if fit: re_match_list.append("Fit") if mc: - re_match_list.append("MC") - re_match_list.append("Mc") + re_match_list.extend(("MC", "Mc")) re_match = "|".join(re_match_list) re_match = f"({re_match}){name}" # Makes selection of names plus corresponding labels diff --git a/tests/boostcfg/test_boostcfg.py b/tests/boostcfg/test_boostcfg.py index bcd7a87..5430c7b 100644 --- a/tests/boostcfg/test_boostcfg.py +++ b/tests/boostcfg/test_boostcfg.py @@ -14,7 +14,7 @@ def test_append_value_from_line(): cfg.append_value_from_line("false_bool = False") cfg.append_value_from_line("true_bool = true") assert cfg["key"] == "value" - assert cfg["float"] == 3.14 + assert cfg["float"] == 3.14 # noqa: FURB152 assert cfg["int"] == -11 assert not cfg["false_bool"] assert cfg["true_bool"] diff --git a/tests/pawian/data/test_read_ascii.py b/tests/pawian/data/test_read_ascii.py index d9694e0..04b3afc 100644 --- a/tests/pawian/data/test_read_ascii.py +++ b/tests/pawian/data/test_read_ascii.py @@ -21,14 +21,14 @@ def test_read_with_weight(): column_names = frame.columns.droplevel(1).unique().tolist() head = frame.head(1) - assert pytest.approx(head[column_names[-1]].values[0]) == 0.99407 - assert pytest.approx(head[column_names[0]].values.tolist()[0]) == [ + assert pytest.approx(head[column_names[-1]].to_numpy()[0]) == 0.99407 + assert pytest.approx(head[column_names[0]].to_numpy()[0]) == [ -0.00357645, 0.0962561, 0.0181079, 0.170545, ] - assert pytest.approx(head[column_names[2]].values.tolist()[0]) == [ + assert pytest.approx(head[column_names[2]].to_numpy()[0]) == [ -0.174404, -0.719412, -0.233159, @@ -36,13 +36,13 @@ def test_read_with_weight(): ] tail = frame.tail(1) - assert pytest.approx(tail[column_names[0]].values.tolist()[0]) == [ + assert pytest.approx(tail[column_names[0]].to_numpy()[0]) == [ -0.0487412, -0.0343714, 0.0171864, 0.152749, ] - assert pytest.approx(tail[column_names[2]].values.tolist()[0]) == [ + assert pytest.approx(tail[column_names[2]].to_numpy()[0]) == [ 0.376848, 0.225407, -0.659593, @@ -67,13 +67,13 @@ def test_read_no_weights(particles): column_names = frame.columns.droplevel(1).unique().tolist() head = frame.head(1) - assert pytest.approx(head[column_names[0]].values.tolist()[0]) == [ + assert pytest.approx(head[column_names[0]].to_numpy()[0]) == [ -0.279306, -0.175576, -0.122704, 0.378648, ] - assert pytest.approx(head[column_names[2]].values.tolist()[0]) == [ + assert pytest.approx(head[column_names[2]].to_numpy()[0]) == [ 0.0245524, -0.146873, 0.193947, @@ -81,13 +81,13 @@ def test_read_no_weights(particles): ] tail = frame.tail(1) - assert pytest.approx(tail[column_names[0]].values.tolist()[0]) == [ + assert pytest.approx(tail[column_names[0]].to_numpy()[0]) == [ -0.189277, -0.0520959, -0.0896247, 0.257006, ] - assert pytest.approx(tail[column_names[2]].values.tolist()[0]) == [ + assert pytest.approx(tail[column_names[2]].to_numpy()[0]) == [ 0.640318, -0.186286, -0.0528645, diff --git a/tests/pawian/test_qa.py b/tests/pawian/test_qa.py index 6595257..1180682 100644 --- a/tests/pawian/test_qa.py +++ b/tests/pawian/test_qa.py @@ -105,7 +105,7 @@ def test_draw_histogram(): assert patch[-5].get_height() == values[-5] -@pytest.mark.slow() +@pytest.mark.slow def test_draw_all_histograms(): """Test :func:`pawian.qa.PawianHists.draw_all_histograms`""" hists = PawianHists(FILENAME_ROOT6) @@ -114,7 +114,7 @@ def test_draw_all_histograms(): assert n_plots == 19 -@pytest.mark.slow() +@pytest.mark.slow def test_draw_combined_histogram(): """Test :func:`pawian.qa.PawianHists.draw_combined_histogram`""" hists = PawianHists(FILENAME_ROOT6) diff --git a/tox.ini b/tox.ini deleted file mode 100644 index db456cd..0000000 --- a/tox.ini +++ /dev/null @@ -1,126 +0,0 @@ -[tox] -skip_install = True -skip_missing_interpreters=true -skipsdist = True -envlist = - py, - doc, - sty, - -[testenv] -allowlist_externals = - pytest -commands = - pytest {posargs:tests} -description = - Run all fast unit tests - -[testenv:cov] 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<29308176+redeboer@users.noreply.github.com> Date: Thu, 7 Nov 2024 13:38:49 +0100 Subject: [PATCH 5/5] MAINT: update dev environment --- .binder/postBuild | 1 + .github/workflows/ci.yml | 6 +++--- .pre-commit-config.yaml | 1 + CONTRIBUTING.md | 2 +- 4 files changed, 6 insertions(+), 4 deletions(-) diff --git a/.binder/postBuild b/.binder/postBuild index 0a5a2b2..00acf5d 100755 --- a/.binder/postBuild +++ b/.binder/postBuild @@ -4,6 +4,7 @@ curl -LsSf https://astral.sh/uv/install.sh | sh source $HOME/.cargo/env uv export \ --group jupyter \ + --no-dev \ > requirements.txt uv pip install \ --requirement requirements.txt \ diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index d8eb6a1..6577534 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -28,7 +28,7 @@ on: jobs: doc: - uses: ComPWA/actions/.github/workflows/ci-docs.yml@v2 + uses: ComPWA/actions/.github/workflows/ci-docs.yml@v2.1 permissions: pages: write id-token: write @@ -36,7 +36,7 @@ jobs: gh-pages: true specific-pip-packages: ${{ inputs.specific-pip-packages }} pytest: - uses: ComPWA/actions/.github/workflows/pytest.yml@v2 + uses: ComPWA/actions/.github/workflows/pytest.yml@v2.1 with: coverage-target: pawian macos-python-version: "3.9" @@ -45,4 +45,4 @@ jobs: if: inputs.specific-pip-packages == '' secrets: token: ${{ secrets.PAT }} - uses: ComPWA/actions/.github/workflows/pre-commit.yml@v2 + uses: ComPWA/actions/.github/workflows/pre-commit.yml@v2.1 diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index 07ebd84..032d5e3 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -20,6 +20,7 @@ repos: - --repo-name=pawian-tools - --repo-organization=RUB-EP1 - --repo-title=Pawian Tools + - --update-lock-files=outsource - id: remove-empty-tags - repo: https://github.com/kynan/nbstripout diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md index 6c71942..399ab3d 100644 --- a/CONTRIBUTING.md +++ b/CONTRIBUTING.md @@ -15,7 +15,7 @@ cd pawian-tools Now it's simply a matter of creating and activating the [virtual environment](https://docs.astral.sh/uv/pip/environments) with [`uv sync`](https://docs.astral.sh/uv/reference/cli/#uv-sync). The dependencies for the project are 'pinned' in each commit through the [`uv.lock` file](https://docs.astral.sh/uv/concepts/projects/#project-lockfile). ```shell -uv sync +uv sync --all-extras source .venv/bin/activate ```