Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Galaxy Training for the MFAssignR tool suite #11

Open
hechth opened this issue Aug 16, 2024 · 0 comments
Open

Galaxy Training for the MFAssignR tool suite #11

hechth opened this issue Aug 16, 2024 · 0 comments
Assignees

Comments

@hechth
Copy link
Member

hechth commented Aug 16, 2024

The MFAssignR tools will be available on usegalaxy.eu from monday on so we can start building a workflow and creating the galaxy training.

The best procedure is to

  • start with a history and do your analysis
  • take notes on the way about each individual step and write down why you are doing this etc.
  • extract a workflow from the history
  • make the workflow nice, with annotations, label all outputs and inputs, make sure all data types are moved around correctly etc.
  • Take this worfklow and deposit it on workflow hub
  • deposit the input dataset on Zenodo -> use our account and add it to the RECETOX SpecDatRI community
  • Create the Galaxy Training skeleton using planemo from the workflow and the data deposited on Zenodo
  • Fill in the text in the format of the Galaxy training
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants