forked from trinhvg/MoMA
-
Notifications
You must be signed in to change notification settings - Fork 0
/
test.py
281 lines (221 loc) · 11 KB
/
test.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
"""
Training a single model (student or teacher)
"""
from __future__ import print_function
import glob
import os
# os.environ['CUDA_VISIBLE_DEVICES'] = '2,3'
import argparse
import time
import importlib
import torch
import torch.nn as nn
import torch.optim as optim
import torch.multiprocessing as mp
import torch.distributed as dist
import torch.nn as nn
import torch.backends.cudnn as cudnn
import tensorboard_logger as tb_logger
import random
import pandas as pd
import numpy as np
from models import model_dict
from dataset.cifar100 import get_cifar100_dataloaders
from dataset.imagenet import get_imagenet_dataloader
from dataset.imagenet_dali import get_dali_data_loader
from helper.loops_RFF import train_vanilla as train, validate_vanilla
from learning.contrast_trainer import BaseTrainer
from helper.util import save_dict_to_json, reduce_tensor, adjust_learning_rate, update_dict_to_json, \
load_pretrained_weights, load_pretrained_weights_teacher
from dataset.histo_dataset import get_histo_dataloader, histodata_list, get_histo_dataloader_sample, get_histo_testloader
from model_def import load_model, load_model_test
def parse_option():
parser = argparse.ArgumentParser('argument for training')
# baisc
parser.add_argument('--print_freq', type=int, default=50, help='print frequency')
parser.add_argument('--batch_size', type=int, default=64, help='batch_size')
parser.add_argument('--num_workers', type=int, default=8, help='num_workers')
parser.add_argument('--epochs', type=int, default=60, help='number of training epochs')
parser.add_argument('--gpu_id', type=str, default='0', help='id(s) for CUDA_VISIBLE_DEVICES')
parser.add_argument('--seed', default=12345, type=int,
help='seed for initializing training. choices=[None, 0, 1],')
parser.add_argument('--trial', type=str, default='1', help='trial id')
# optimization
parser.add_argument('--learning_rate', type=float, default=0.05, help='learning rate')
parser.add_argument('--lr_decay_epochs', type=str, default='30,40,60', help='where to decay lr, can be a list')
parser.add_argument('--lr_decay_rate', type=float, default=0.1, help='decay rate for learning rate')
parser.add_argument('--weight_decay', type=float, default=1e-4, help='weight decay')
parser.add_argument('--momentum', type=float, default=0.9, help='momentum')
parser.add_argument('--cosine', action='store_true', help='using cosine annealing')
# dataset
# dataset and model
parser.add_argument('--dataset', type=str, default='prostate_hv', help='dataset')
parser.add_argument('--models_dir', type=str, default='/data1/trinh/code/KD/SimKD_model/KD_teNst_ImageNet_2021_process4/KD_CMO_att', help='dataset')
parser.add_argument('--model_path', type=str, default='./save/test4/', help='where to save')
parser.add_argument('--csv_dir', type=str, default='Acc_KD_CMO_att_cmo_kather19_e_.csv', help='dataset')
parser.add_argument('--model', type=str, default='effiB0',)
# choices=['resnet8', 'resnet14', 'resnet20', 'resnet32', 'resnet44', 'resnet56', 'resnet110',
# 'ResNet18', 'ResNet34',
# 'resnet8x4', 'resnet32x4', 'wrn_16_1', 'wrn_16_2', 'wrn_40_1', 'wrn_40_2',
# 'vgg8', 'vgg11', 'vgg13', 'vgg16', 'vgg19',
# 'MobileNetV2', 'ShuffleV1', 'ShuffleV2', 'ResNet50',
# 'effiB0']
parser.add_argument('--pretrain', type=str, default='PANDA', help='tma_class, tma_kd, ImageNet')
parser.add_argument('--pre_strict', action='store_false', help='strict by default')
# Augment
parser.add_argument('--aug_train', type=str, default='RA', help='aug_train')
parser.add_argument('--crop', type=float, default=0.2, help='crop threshold for RandomResizedCrop')
parser.add_argument('--image_size', type=int, default=512, help='image_size')
parser.add_argument('--image_resize', action='store_true')
parser.add_argument('--n_cls', type=int, default=8, help='image_size')
parser.add_argument('--skip_test', action='store_true', help='strict by default')
parser.add_argument('--dali', type=str, choices=['cpu', 'gpu'], default=None)
# multiprocessing
parser.add_argument('--multiprocessing-distributed', action='store_true',
help='Use multi-processing distributed training to launch '
'N processes per node, which has N GPUs. This is the '
'fastest way to use PyTorch for either single node or '
'multi node data parallel training')
parser.add_argument('--dist-url', default='tcp://127.0.0.1:23451', type=str,
help='url used to set up distributed training')
parser.add_argument('--deterministic', action='store_false', help='Make results reproducible, true by default')
parser.add_argument('--skip_validation', action='store_false', help='Skip validation of teacher')
opt = parser.parse_args()
# set different learning rates for these MobileNet/ShuffleNet models
# if opt.model_s in ['MobileNetV2', 'MobileNetV2_1_0', 'ShuffleV1', 'ShuffleV2', 'ShuffleV2_1_5']:
# opt.learning_rate = 0.01
# set the path of model and tensorboard
# opt.model_path = f'./save/test4/'
opt.tb_path = './save/students/tensorboard_test'
iterations = opt.lr_decay_epochs.split(',')
opt.lr_decay_epochs = list([])
for it in iterations:
opt.lr_decay_epochs.append(int(it))
# set the model name
opt.model_name = f'{opt.csv_dir}_test_{opt.dataset}_aug_{opt.aug_train}'
opt.save_folder = os.path.join(opt.model_path, opt.model_name)
if not os.path.isdir(opt.save_folder):
os.makedirs(opt.save_folder)
return opt
best_acc = 0
best_f1 = 0
total_time = time.time()
def main():
opt = parse_option()
# ASSIGN CUDA_ID
os.environ['CUDA_VISIBLE_DEVICES'] = opt.gpu_id
ngpus_per_node = torch.cuda.device_count()
opt.ngpus_per_node = ngpus_per_node
if opt.multiprocessing_distributed:
# Since we have ngpus_per_node processes per node, the total world_size
# needs to be adjusted accordingly
world_size = 1
opt.world_size = ngpus_per_node * world_size
# Use torch.multiprocessing.spawn to launch distributed processes: the
# main_worker process function
mp.spawn(main_worker, nprocs=ngpus_per_node, args=(ngpus_per_node, opt))
else:
main_worker(None if ngpus_per_node > 1 else opt.gpu_id, ngpus_per_node, opt)
def main_worker(gpu, ngpus_per_node, opt):
global best_acc, best_f1, total_time
opt.gpu = int(gpu)
opt.gpu_id = int(gpu)
opt.rank = 0
opt.dist_backend = 'nccl'
if opt.gpu is not None:
print("Use GPU: {} for training".format(opt.gpu))
trainer = BaseTrainer(opt)
trainer.init_ddp_environment(gpu, ngpus_per_node)
# if opt.deterministic:
if opt.seed is not None:
print('opt.deterministic', opt.deterministic)
random.seed(opt.seed)
torch.manual_seed(opt.seed)
cudnn.deterministic = True
cudnn.benchmark = False
np.random.seed(opt.seed)
torch.backends.cudnn.benchmark = False
torch.backends.cudnn.deterministic = True
torch.cuda.manual_seed(opt.seed)
torch.cuda.manual_seed_all(opt.seed)
print('opt.n_cls:', opt.n_cls)
criterion = nn.CrossEntropyLoss()
# dataloader
test_loader = get_histo_testloader(
opt=opt,
batch_size=opt.batch_size, num_workers=opt.num_workers,
multiprocessing_distributed=opt.multiprocessing_distributed)
df = pd.read_csv(f'./save/model_stat/{opt.csv_dir}')
name_list = list(df['name_list'])
max_idx = list(df['idx'])
models_dict = dict(zip(name_list, max_idx))
# routine
out_stat = {}
model_tested = 0
for name in name_list:
print(name)
# if 'Class_ce_model_effiB0_kather19_IS_224_BS256_StdPre_PANDA_CPU8_GPU2_seed12345_epoch50_trial_7' != name:
# continue
if 'cmo_crc_tp_folder1' in name:
continue
# if 'trial_1' not in name:
# continue
# if 'd1.0' in name:
# continue
model_idx = models_dict[name]
pretrain_path = glob.glob(f'{opt.models_dir}/*/{name}/model_{model_idx}.pth')
if len(pretrain_path) < 1:
# continue
if 'f1' in opt.csv_dir:
print('f1 in ', opt.csv_dir)
pretrain_path = glob.glob(f'{opt.models_dir}/*/{name}/net_best_f1.pth')
else:
pretrain_path = glob.glob(f'{opt.models_dir}/*/{name}/net_best_acc.pth')
if len(pretrain_path) < 1:
print("There is no model at:", f'{opt.models_dir}/*/{name}')
continue
pretrain_path = pretrain_path[0]
else:
pretrain_path = pretrain_path[0]
print(pretrain_path)
model = load_model_test(opt.model, pretrain_path, opt.n_cls, opt.pre_strict, opt.gpu, opt.multiprocessing_distributed)
if torch.cuda.is_available():
# For multiprocessing distributed, DistributedDataParallel constructor
# should always set the single device scope, otherwise,
# DistributedDataParallel will use all available devices.
if opt.multiprocessing_distributed:
if opt.gpu is not None:
torch.cuda.set_device(opt.gpu)
model.cuda(opt.gpu)
DDP = torch.nn.parallel.DistributedDataParallel
model = DDP(model, device_ids=[opt.gpu])
else:
print('multiprocessing_distributed must be with a specifiec gpu id')
else:
criterion = criterion.cuda()
if torch.cuda.device_count() > 1:
model = nn.DataParallel(model).cuda()
else:
model = model.cuda()
if not opt.deterministic:
cudnn.benchmark = True
print("==> training...")
print('GPU %d validating' % (opt.gpu))
test_acc, test_loss, test_output_stat = validate_vanilla(test_loader, model, criterion, opt, prefix='Val')
# val_acc, val_loss, val_output_stat = validate_distill(val_loader, module_list, criterion_cls, opt, prefix='Val')
for i in test_output_stat.keys():
print(i, [test_output_stat[i]])
test_merics = {
'name': name,
'test_cf': pd.Series({'conf_mat': test_output_stat['conf_mat']}).to_json(orient='records'),
'test_loss': test_loss,
'test_acc': test_acc
}
# update_dict_to_json(model_tested, test_merics, os.path.join(opt.save_folder, "stat.json"))
model_tested += 1
out_stat[model_tested] = test_merics
import json
with open(os.path.join(opt.save_folder, "stat.json"), 'w') as json_file:
json.dump(out_stat, json_file, indent=4)
if __name__ == '__main__':
main()