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Implement skyline coalescent simulator #43

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ArtPoon opened this issue Feb 16, 2017 · 2 comments
Open

Implement skyline coalescent simulator #43

ArtPoon opened this issue Feb 16, 2017 · 2 comments
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Near future

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@ArtPoon
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ArtPoon commented Feb 16, 2017

This would make a nice basis for #42
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ArtPoon commented Feb 16, 2017 •
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The kernel probably wouldn't do much better than a lineages-through-time vector for the classical skyline, but it might be interesting to see how it works for an autocorrelated lineage-specific smoothing approach (like a latent structured coalescent).

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ArtPoon commented May 2, 2017

Hah, someone else just published on this!
http://biorxiv.org/content/early/2017/03/02/112060

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