Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

FOR HBCD: publish on Zenodo to obtain DOI specifically linked to the current version of software #882

Closed
LuciMoore opened this issue Nov 19, 2024 · 4 comments · Fixed by #878 or #886
Labels
enhancement New feature or request

Comments

@LuciMoore
Copy link

@mattcieslak -

The MIDB team has submitted an initial NMIND checklist review for QSIPrep as part of efforts to standardize pipelines used for HBCD data processing (detailed here)

QSIPrep hits all major requirements for HBCD and was very highly rated otherwise! The only item remaining is to provide a DOI that specifically links to the current version of the software. Please self-publish on Zenodo and add the DOI to your webpage (it should be quick and easy)

Though not required, if you would like to view additional checklist items that QSIPrep did not meet in order to address them, you can make a copy of the json from this issue and import it to https://www.nmind.org/standards-checklist/

@LuciMoore LuciMoore added the enhancement New feature or request label Nov 19, 2024
@tsalo
Copy link
Member

tsalo commented Nov 19, 2024

We can add it, but version-specific DOIs aren't really useful. There's no good workflow (AFAIK) to generate a version-specific DOI and then put that DOI in the boilerplate (where most people get their reference list) or even the project documentation for that version.

@tsalo
Copy link
Member

tsalo commented Nov 19, 2024

It's up now! https://zenodo.org/records/14187328

@LuciMoore
Copy link
Author

@mattcieslak and @tsalo thank you both. Do you mind adding the Zenodo badge to your readthedocs page as well? Then you'll be ready for the NMIND team to perform the final review

The same will need to be done for QSIRecon, I'll open a separate issue on the GitHub

@LuciMoore
Copy link
Author

We can add it, but version-specific DOIs aren't really useful. There's no good workflow (AFAIK) to generate a version-specific DOI and then put that DOI in the boilerplate (where most people get their reference list) or even the project documentation for that version.

@tsalo Zenodo has a top-level DOI and per-version DOI (see Nibabies Zenodo for example). I believe it automatically generates per-version DOIs when there's a new release on GitHub

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
enhancement New feature or request
Projects
None yet
Development

Successfully merging a pull request may close this issue.

2 participants