tests.yml

name: Tests

on: [pull_request]

jobs:
  build:

    runs-on: ${{ matrix.os }}
    defaults:
      run:
        shell: bash

    strategy:
      fail-fast: false
      max-parallel: 9
      matrix:
        python-version: ['3.9', '3.10', '3.11']
        os: [ubuntu-latest, windows-latest, macos-latest]
        include:
        - os: ubuntu-latest
          path: ~/.cache/pip
        - os: macos-latest
          path: ~/Library/Caches/pip
        - os: windows-latest
          path: ~\AppData\Local\pip\Cache

    steps:
      - name: Cache pip
        uses: actions/cache@v3
        with:
          path: ${{ matrix.path }}
          key: ${{ runner.os }}-pip-${{ hashFiles('setup.py') }}
          restore-keys: |
            ${{ runner.os }}-pip-

      - uses: actions/checkout@v3

      - name: Set up Python ${{ matrix.python-version }}
        uses: actions/setup-python@v4
        with:
          python-version: ${{ matrix.python-version }}

      - name: Install dependencies
        run: |
          pip install \
            -r requirements.txt \
            -r requirements/tests.txt

      - name: Install pypardiso on non-macOS
        if: (matrix.os != 'macos-latest')
        run: |
          pip install pypardiso

      - name: Disable numba JIT for codecov to include jitted methods
        if: (matrix.python-version == 3.9) && (matrix.os == 'ubuntu-latest')
        run: |
          echo "NUMBA_DISABLE_JIT=1" >> $GITHUB_ENV

      - name: Running tests
        run:
          pytest .
            --cov=.
            --cov-report=xml
            --color=yes

      - name: Upload coverage to Codecov
        if: (matrix.python-version == 3.9) && (matrix.os == 'ubuntu-latest')
        uses: codecov/codecov-action@v3
        with:
          token: ${{ secrets.CODECOV_TOKEN }}
          file: ./coverage.xml
          flags: unittests
          name: codecov-umbrella


      - name: flake8 Lint
        if: (matrix.python-version == 3.9) && (matrix.os == 'ubuntu-latest')
        uses: py-actions/flake8@v2
        with:
           ignore: "D100,E226,E402,E712,E741,F401,F403,N806,W503,WPS111,WPS211,WPS237,WPS300,WPS305,WPS319,WPS347,WPS410,WPS437"
           exclude: "docs/,scripts/,tests/,openpnm/contrib/,setup.py,openpnm/models/_doctxt.py,openpnm/models/phase/_phasedocs.py,openpnm/models/geometry/_geodocs.py"
           max-line-length: "90"
           path: ".."